RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 NKTRP30414 1462 aaKnown RBP20.78■□□□□ 0.92
GAPDH-208ENST00000474249 RPRD2Q5VT52 1461 aaKnown RBP20.77■□□□□ 0.92
GAPDH-208ENST00000474249 APLP2Q06481 763 aa20.76■□□□□ 0.91
GAPDH-208ENST00000474249 SLAIN2Q9P270 581 aa20.74■□□□□ 0.91
GAPDH-208ENST00000474249 PLEKHG1Q9ULL1 1385 aa20.74■□□□□ 0.91
GAPDH-208ENST00000474249 ANKRD50Q9ULJ7 1429 aa20.72■□□□□ 0.91
GAPDH-208ENST00000474249 CHD2O14647 1828 aaKnown RBP20.72■□□□□ 0.91
GAPDH-208ENST00000474249 TMEM131LA2VDJ0 1609 aa20.71■□□□□ 0.91
GAPDH-208ENST00000474249 TBX22Q9Y458 520 aa20.71■□□□□ 0.91
GAPDH-208ENST00000474249 MYO5BQ9ULV0 1848 aa20.69■□□□□ 0.9
GAPDH-208ENST00000474249 MSH6P52701 1360 aa20.69■□□□□ 0.9
GAPDH-208ENST00000474249 RIMS2Q9UQ26 1411 aa20.69■□□□□ 0.9
GAPDH-208ENST00000474249 NCOA3Q9Y6Q9 1424 aa20.69■□□□□ 0.9
GAPDH-208ENST00000474249 ADAMTS13Q76LX8 1427 aa20.66■□□□□ 0.9
GAPDH-208ENST00000474249 HDGFP51858 240 aaKnown RBP20.65■□□□□ 0.9
GAPDH-208ENST00000474249 JCADQ9P266 1359 aa20.65■□□□□ 0.9
GAPDH-208ENST00000474249 GCC2Q8IWJ2 1684 aa20.64■□□□□ 0.89
GAPDH-208ENST00000474249 PHLPP1O60346 1717 aa20.63■□□□□ 0.89
GAPDH-208ENST00000474249 FAM50AQ14320 339 aaKnown RBP20.63■□□□□ 0.89
GAPDH-208ENST00000474249 BCANQ96GW7 911 aa20.63■□□□□ 0.89
GAPDH-208ENST00000474249 UNC13BO14795 1591 aa20.63■□□□□ 0.89
GAPDH-208ENST00000474249 COL16A1Q07092 1604 aaPredicted RBP20.63■□□□□ 0.89
GAPDH-208ENST00000474249 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.61■□□□□ 0.89
GAPDH-208ENST00000474249 PIK3R4Q99570 1358 aa20.6■□□□□ 0.89
GAPDH-208ENST00000474249 E9PCH4 1651 aa20.6■□□□□ 0.89
GAPDH-208ENST00000474249 ROCK1Q13464 1354 aa20.58■□□□□ 0.89
GAPDH-208ENST00000474249 PPP1R15AO75807 674 aaPredicted RBP20.58■□□□□ 0.89
GAPDH-208ENST00000474249 C19orf44Q9H6X5 657 aa20.58■□□□□ 0.89
GAPDH-208ENST00000474249 LRP6O75581 1613 aa20.57■□□□□ 0.88
GAPDH-208ENST00000474249 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.56■□□□□ 0.88
GAPDH-208ENST00000474249 PTPRUQ92729 1446 aa20.56■□□□□ 0.88
GAPDH-208ENST00000474249 DIP2AQ14689 1571 aa20.56■□□□□ 0.88
GAPDH-208ENST00000474249 SPATA31A6Q5VVP1 1343 aa20.56■□□□□ 0.88
GAPDH-208ENST00000474249 NUTM2DQ5VT03 806 aaPredicted RBP20.55■□□□□ 0.88
GAPDH-208ENST00000474249 AHDC1Q5TGY3 1603 aaPredicted RBP20.55■□□□□ 0.88
GAPDH-208ENST00000474249 CADPS2Q86UW7 1296 aa20.54■□□□□ 0.88
GAPDH-208ENST00000474249 IQGAP3Q86VI3 1631 aa20.54■□□□□ 0.88
GAPDH-208ENST00000474249 AMOTL2Q9Y2J4 779 aa20.53■□□□□ 0.88
GAPDH-208ENST00000474249 CHGAP10645 457 aaKnown RBP20.52■□□□□ 0.87
GAPDH-208ENST00000474249 SETD1AO15047 1707 aaKnown RBP20.51■□□□□ 0.87
GAPDH-208ENST00000474249 BRINP3Q76B58 766 aa20.51■□□□□ 0.87
GAPDH-208ENST00000474249 SHPRHQ149N8 1683 aa20.49■□□□□ 0.87
GAPDH-208ENST00000474249 NUP155O75694 1391 aa20.49■□□□□ 0.87
GAPDH-208ENST00000474249 ATF3P18847 181 aa20.49■□□□□ 0.87
GAPDH-208ENST00000474249 NRXN3Q9Y4C0 1643 aa20.48■□□□□ 0.87
GAPDH-208ENST00000474249 TRPM2O94759 1503 aa20.47■□□□□ 0.87
GAPDH-208ENST00000474249 ZNF772Q68DY9 489 aaPredicted RBP20.47■□□□□ 0.87
GAPDH-208ENST00000474249 C14orf37Q86TY3 774 aa20.47■□□□□ 0.87
GAPDH-208ENST00000474249 DCCP43146 1447 aa20.47■□□□□ 0.87
GAPDH-208ENST00000474249 SETBP1Q9Y6X0 1596 aa20.46■□□□□ 0.87
GAPDH-208ENST00000474249 XRN1Q8IZH2 1706 aaKnown RBP20.46■□□□□ 0.87
GAPDH-208ENST00000474249 UPF1Q92900 1129 aaKnown RBP eCLIP20.45■□□□□ 0.86
GAPDH-208ENST00000474249 METP08581 1390 aa20.43■□□□□ 0.86
GAPDH-208ENST00000474249 MST1RQ04912 1400 aa20.43■□□□□ 0.86
GAPDH-208ENST00000474249 SETD5Q9C0A6 1442 aa20.43■□□□□ 0.86
GAPDH-208ENST00000474249 ASXL1Q8IXJ9 1541 aa20.41■□□□□ 0.86
GAPDH-208ENST00000474249 MEX3CQ5U5Q3 659 aaKnown RBP20.39■□□□□ 0.85
GAPDH-208ENST00000474249 CDK12Q9NYV4 1490 aaPredicted RBP20.38■□□□□ 0.85
GAPDH-208ENST00000474249 NHSL1Q5SYE7 1610 aa20.38■□□□□ 0.85
GAPDH-208ENST00000474249 RXRBP28702 533 aa20.37■□□□□ 0.85
GAPDH-208ENST00000474249 SRCAPQ6ZRS2 3230 aa20.37■□□□□ 0.85
GAPDH-208ENST00000474249 SPHKAPQ2M3C7 1700 aa20.36■□□□□ 0.85
GAPDH-208ENST00000474249 TRIM52Q96A61 297 aa20.36■□□□□ 0.85
GAPDH-208ENST00000474249 ADGRL3Q9HAR2 1447 aa20.34■□□□□ 0.85
GAPDH-208ENST00000474249 NUTM2BA6NNL0 878 aaPredicted RBP20.34■□□□□ 0.85
GAPDH-208ENST00000474249 NUTM2EB1AL46 878 aaPredicted RBP20.34■□□□□ 0.85
GAPDH-208ENST00000474249 NUTM2AQ8IVF1 878 aaPredicted RBP20.34■□□□□ 0.85
GAPDH-208ENST00000474249 LRRC59Q96AG4 307 aaKnown RBP20.34■□□□□ 0.85
GAPDH-208ENST00000474249 NEXMIFQ5QGS0 1516 aa20.34■□□□□ 0.85
GAPDH-208ENST00000474249 AFF2P51816 1311 aa20.33■□□□□ 0.85
GAPDH-208ENST00000474249 ITGAEP38570 1179 aa20.33■□□□□ 0.85
GAPDH-208ENST00000474249 DDX17Q92841 729 aaKnown RBP20.32■□□□□ 0.84
GAPDH-208ENST00000474249 PNPLA6Q8IY17 1366 aa20.32■□□□□ 0.84
GAPDH-208ENST00000474249 CLTCL1P53675 1640 aa20.31■□□□□ 0.84
GAPDH-208ENST00000474249 ZNF326Q5BKZ1 582 aaKnown RBP20.3■□□□□ 0.84
GAPDH-208ENST00000474249 LAMC1P11047 1609 aa20.29■□□□□ 0.84
GAPDH-208ENST00000474249 NALCNQ8IZF0 1738 aa20.29■□□□□ 0.84
GAPDH-208ENST00000474249 C1orf167Q5SNV9 1468 aa20.28■□□□□ 0.84
GAPDH-208ENST00000474249 PRAG1Q86YV5 1406 aa20.28■□□□□ 0.84
GAPDH-208ENST00000474249 QTRT2Q9H974 415 aaKnown RBP20.27■□□□□ 0.83
GAPDH-208ENST00000474249 SOS2Q07890 1332 aaPredicted RBP20.26■□□□□ 0.83
GAPDH-208ENST00000474249 ROBO2Q9HCK4 1378 aa20.25■□□□□ 0.83
GAPDH-208ENST00000474249 RGS12O14924 1447 aa20.25■□□□□ 0.83
GAPDH-208ENST00000474249 NAIPQ13075 1403 aa20.25■□□□□ 0.83
GAPDH-208ENST00000474249 PTCH1Q13635 1447 aa20.25■□□□□ 0.83
GAPDH-208ENST00000474249 RBM6P78332 1123 aaKnown RBP20.25■□□□□ 0.83
GAPDH-208ENST00000474249 C8orf37Q96NL8 207 aa20.25■□□□□ 0.83
GAPDH-208ENST00000474249 PPARGC1BQ86YN6 1023 aaKnown RBP20.24■□□□□ 0.83
GAPDH-208ENST00000474249 ORAI2Q96SN7 254 aa20.24■□□□□ 0.83
GAPDH-208ENST00000474249 VGFO15240 615 aaPredicted RBP20.21■□□□□ 0.83
GAPDH-208ENST00000474249 RRBP1Q9P2E9 1410 aaKnown RBP20.21■□□□□ 0.83
GAPDH-208ENST00000474249 KIF1BO60333 1816 aa20.2■□□□□ 0.82
GAPDH-208ENST00000474249 EP400Q96L91 3159 aa20.2■□□□□ 0.82
GAPDH-208ENST00000474249 FNBP4Q8N3X1 1017 aaPredicted RBP20.19■□□□□ 0.82
GAPDH-208ENST00000474249 RPGRIP1LQ68CZ1 1315 aa20.19■□□□□ 0.82
GAPDH-208ENST00000474249 NGLY1Q96IV0 654 aa20.17■□□□□ 0.82
GAPDH-208ENST00000474249 ADAMTS2O95450 1211 aa20.16■□□□□ 0.82
GAPDH-208ENST00000474249 HFM1A2PYH4 1435 aa20.15■□□□□ 0.82
GAPDH-208ENST00000474249 COL22A1Q8NFW1 1626 aaPredicted RBP20.14■□□□□ 0.82
GAPDH-208ENST00000474249 PPLO60437 1756 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms