RNA–Protein interactions for RNA: ENST00000472603.1

RFC5-205, Transcript of replication factor C subunit 5, humanhuman

TSL 2

Gene RFC5, Length 681 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-205ENST00000472603 KCNA6P17658 529 aa18.46■□□□□ 0.55
RFC5-205ENST00000472603 UNC13BO14795 1591 aa18.46■□□□□ 0.55
RFC5-205ENST00000472603 SLC52A1Q9NWF4 448 aa18.45■□□□□ 0.54
RFC5-205ENST00000472603 ZFYVE9O95405 1425 aa18.44■□□□□ 0.54
RFC5-205ENST00000472603 TMEM131LA2VDJ0 1609 aa18.43■□□□□ 0.54
RFC5-205ENST00000472603 RBM33Q96EV2 1170 aaKnown RBP18.43■□□□□ 0.54
RFC5-205ENST00000472603 PROSER2Q86WR7 435 aaPredicted RBP18.42■□□□□ 0.54
RFC5-205ENST00000472603 BCANQ96GW7 911 aa18.41■□□□□ 0.54
RFC5-205ENST00000472603 CHD2O14647 1828 aaKnown RBP18.41■□□□□ 0.54
RFC5-205ENST00000472603 E9PCH4 1651 aa18.41■□□□□ 0.54
RFC5-205ENST00000472603 RIMS2Q9UQ26 1411 aa18.4■□□□□ 0.54
RFC5-205ENST00000472603 RGS17Q9UGC6 210 aaPredicted RBP18.4■□□□□ 0.54
RFC5-205ENST00000472603 MSH6P52701 1360 aa18.4■□□□□ 0.54
RFC5-205ENST00000472603 PLEKHG1Q9ULL1 1385 aa18.4■□□□□ 0.54
RFC5-205ENST00000472603 PPP1R15AO75807 674 aaPredicted RBP18.38■□□□□ 0.53
RFC5-205ENST00000472603 IQGAP3Q86VI3 1631 aa18.38■□□□□ 0.53
RFC5-205ENST00000472603 PHLPP1O60346 1717 aa18.37■□□□□ 0.53
RFC5-205ENST00000472603 DIP2AQ14689 1571 aa18.34■□□□□ 0.53
RFC5-205ENST00000472603 ROCK1Q13464 1354 aa18.33■□□□□ 0.53
RFC5-205ENST00000472603 COL16A1Q07092 1604 aaPredicted RBP18.32■□□□□ 0.52
RFC5-205ENST00000472603 ADAMTS13Q76LX8 1427 aa18.32■□□□□ 0.52
RFC5-205ENST00000472603 CHGAP10645 457 aaKnown RBP18.31■□□□□ 0.52
RFC5-205ENST00000472603 HDGFP51858 240 aaKnown RBP18.31■□□□□ 0.52
RFC5-205ENST00000472603 SLAIN2Q9P270 581 aa18.3■□□□□ 0.52
RFC5-205ENST00000472603 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.29■□□□□ 0.52
RFC5-205ENST00000472603 TBX22Q9Y458 520 aa18.29■□□□□ 0.52
RFC5-205ENST00000472603 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.29■□□□□ 0.52
RFC5-205ENST00000472603 NUTM2DQ5VT03 806 aaPredicted RBP18.28■□□□□ 0.52
RFC5-205ENST00000472603 POTEAQ6S8J7 498 aa18.28■□□□□ 0.52
RFC5-205ENST00000472603 NCOA3Q9Y6Q9 1424 aa18.28■□□□□ 0.52
RFC5-205ENST00000472603 JCADQ9P266 1359 aa18.28■□□□□ 0.52
RFC5-205ENST00000472603 TRPM2O94759 1503 aa18.28■□□□□ 0.52
RFC5-205ENST00000472603 SETD1AO15047 1707 aaKnown RBP18.26■□□□□ 0.51
RFC5-205ENST00000472603 SPHKAPQ2M3C7 1700 aa18.26■□□□□ 0.51
RFC5-205ENST00000472603 C14orf37Q86TY3 774 aa18.26■□□□□ 0.51
RFC5-205ENST00000472603 NUP155O75694 1391 aa18.26■□□□□ 0.51
RFC5-205ENST00000472603 PIK3R4Q99570 1358 aa18.26■□□□□ 0.51
RFC5-205ENST00000472603 AHDC1Q5TGY3 1603 aaPredicted RBP18.24■□□□□ 0.51
RFC5-205ENST00000472603 NRXN3Q9Y4C0 1643 aa18.24■□□□□ 0.51
RFC5-205ENST00000472603 XRN1Q8IZH2 1706 aaKnown RBP18.23■□□□□ 0.51
RFC5-205ENST00000472603 LRP6O75581 1613 aa18.23■□□□□ 0.51
RFC5-205ENST00000472603 ITGAEP38570 1179 aa18.22■□□□□ 0.51
RFC5-205ENST00000472603 SHPRHQ149N8 1683 aa18.22■□□□□ 0.51
RFC5-205ENST00000472603 SETBP1Q9Y6X0 1596 aa18.21■□□□□ 0.51
RFC5-205ENST00000472603 CADPS2Q86UW7 1296 aa18.21■□□□□ 0.51
RFC5-205ENST00000472603 PTPRUQ92729 1446 aa18.21■□□□□ 0.51
RFC5-205ENST00000472603 ATF3P18847 181 aa18.19■□□□□ 0.5
RFC5-205ENST00000472603 C19orf44Q9H6X5 657 aa18.19■□□□□ 0.5
RFC5-205ENST00000472603 DCCP43146 1447 aa18.17■□□□□ 0.5
RFC5-205ENST00000472603 AMOTL2Q9Y2J4 779 aa18.17■□□□□ 0.5
RFC5-205ENST00000472603 SPATA31A6Q5VVP1 1343 aa18.17■□□□□ 0.5
RFC5-205ENST00000472603 CLTCL1P53675 1640 aa18.16■□□□□ 0.5
RFC5-205ENST00000472603 ASXL1Q8IXJ9 1541 aa18.15■□□□□ 0.5
RFC5-205ENST00000472603 NHSL1Q5SYE7 1610 aa18.14■□□□□ 0.49
RFC5-205ENST00000472603 NEXMIFQ5QGS0 1516 aa18.13■□□□□ 0.49
RFC5-205ENST00000472603 MEX3CQ5U5Q3 659 aaKnown RBP18.13■□□□□ 0.49
RFC5-205ENST00000472603 BRINP3Q76B58 766 aa18.13■□□□□ 0.49
RFC5-205ENST00000472603 PPARGC1BQ86YN6 1023 aaKnown RBP18.13■□□□□ 0.49
RFC5-205ENST00000472603 NALCNQ8IZF0 1738 aa18.12■□□□□ 0.49
RFC5-205ENST00000472603 ZNF326Q5BKZ1 582 aaKnown RBP18.12■□□□□ 0.49
RFC5-205ENST00000472603 MST1RQ04912 1400 aa18.12■□□□□ 0.49
RFC5-205ENST00000472603 METP08581 1390 aa18.11■□□□□ 0.49
RFC5-205ENST00000472603 KIF1BO60333 1816 aa18.11■□□□□ 0.49
RFC5-205ENST00000472603 ADGRL3Q9HAR2 1447 aa18.1■□□□□ 0.49
RFC5-205ENST00000472603 ZNF772Q68DY9 489 aaPredicted RBP18.08■□□□□ 0.48
RFC5-205ENST00000472603 SETD5Q9C0A6 1442 aa18.07■□□□□ 0.48
RFC5-205ENST00000472603 RRBP1Q9P2E9 1410 aaKnown RBP18.06■□□□□ 0.48
RFC5-205ENST00000472603 NAIPQ13075 1403 aa18.06■□□□□ 0.48
RFC5-205ENST00000472603 NUTM2BA6NNL0 878 aaPredicted RBP18.05■□□□□ 0.48
RFC5-205ENST00000472603 NUTM2EB1AL46 878 aaPredicted RBP18.05■□□□□ 0.48
RFC5-205ENST00000472603 NUTM2AQ8IVF1 878 aaPredicted RBP18.05■□□□□ 0.48
RFC5-205ENST00000472603 TRIM52Q96A61 297 aa18.05■□□□□ 0.48
RFC5-205ENST00000472603 PTCH1Q13635 1447 aa18.03■□□□□ 0.48
RFC5-205ENST00000472603 CDK12Q9NYV4 1490 aaPredicted RBP18.01■□□□□ 0.47
RFC5-205ENST00000472603 AFF2P51816 1311 aa18■□□□□ 0.47
RFC5-205ENST00000472603 LAMC1P11047 1609 aa18■□□□□ 0.47
RFC5-205ENST00000472603 PNPLA6Q8IY17 1366 aa18■□□□□ 0.47
RFC5-205ENST00000472603 PPLO60437 1756 aa17.99■□□□□ 0.47
RFC5-205ENST00000472603 RXRBP28702 533 aa17.99■□□□□ 0.47
RFC5-205ENST00000472603 DDX17Q92841 729 aaKnown RBP17.99■□□□□ 0.47
RFC5-205ENST00000472603 C1orf167Q5SNV9 1468 aa17.99■□□□□ 0.47
RFC5-205ENST00000472603 LRRC59Q96AG4 307 aaKnown RBP17.98■□□□□ 0.47
RFC5-205ENST00000472603 HFM1A2PYH4 1435 aa17.98■□□□□ 0.47
RFC5-205ENST00000472603 PRAG1Q86YV5 1406 aa17.98■□□□□ 0.47
RFC5-205ENST00000472603 ROBO2Q9HCK4 1378 aa17.97■□□□□ 0.47
RFC5-205ENST00000472603 UPF1Q92900 1129 aaKnown RBP eCLIP17.97■□□□□ 0.47
RFC5-205ENST00000472603 C8orf37Q96NL8 207 aa17.95■□□□□ 0.46
RFC5-205ENST00000472603 VGFO15240 615 aaPredicted RBP17.94■□□□□ 0.46
RFC5-205ENST00000472603 RGS12O14924 1447 aa17.94■□□□□ 0.46
RFC5-205ENST00000472603 CDC42BPGQ6DT37 1551 aa17.91■□□□□ 0.46
RFC5-205ENST00000472603 SLC4A1APQ9BWU0 796 aaKnown RBP17.91■□□□□ 0.46
RFC5-205ENST00000472603 RPGRIP1LQ68CZ1 1315 aa17.91■□□□□ 0.46
RFC5-205ENST00000472603 COL22A1Q8NFW1 1626 aaPredicted RBP17.9■□□□□ 0.46
RFC5-205ENST00000472603 ADAMTS2O95450 1211 aa17.89■□□□□ 0.45
RFC5-205ENST00000472603 ORAI2Q96SN7 254 aa17.89■□□□□ 0.45
RFC5-205ENST00000472603 SOS2Q07890 1332 aaPredicted RBP17.89■□□□□ 0.45
RFC5-205ENST00000472603 RBM6P78332 1123 aaKnown RBP17.88■□□□□ 0.45
RFC5-205ENST00000472603 IFT172Q9UG01 1749 aa17.88■□□□□ 0.45
RFC5-205ENST00000472603 QTRT2Q9H974 415 aaKnown RBP17.87■□□□□ 0.45
RFC5-205ENST00000472603 NGLY1Q96IV0 654 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms