RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 RBM33Q96EV2 1170 aaKnown RBP19.19■□□□□ 0.66
UBR4-211ENST00000467272 CHIC2Q9UKJ5 165 aa19.19■□□□□ 0.66
UBR4-211ENST00000467272 PLEKHG1Q9ULL1 1385 aa19.19■□□□□ 0.66
UBR4-211ENST00000467272 SLAIN2Q9P270 581 aa19.17■□□□□ 0.66
UBR4-211ENST00000467272 NCOA3Q9Y6Q9 1424 aa19.16■□□□□ 0.66
UBR4-211ENST00000467272 MSH6P52701 1360 aa19.14■□□□□ 0.65
UBR4-211ENST00000467272 ANKRD50Q9ULJ7 1429 aa19.14■□□□□ 0.65
UBR4-211ENST00000467272 TMEM131LA2VDJ0 1609 aa19.14■□□□□ 0.65
UBR4-211ENST00000467272 TBX22Q9Y458 520 aa19.13■□□□□ 0.65
UBR4-211ENST00000467272 CHD2O14647 1828 aaKnown RBP19.13■□□□□ 0.65
UBR4-211ENST00000467272 ADAMTS13Q76LX8 1427 aa19.12■□□□□ 0.65
UBR4-211ENST00000467272 RIMS2Q9UQ26 1411 aa19.12■□□□□ 0.65
UBR4-211ENST00000467272 JCADQ9P266 1359 aa19.12■□□□□ 0.65
UBR4-211ENST00000467272 COL16A1Q07092 1604 aaPredicted RBP19.11■□□□□ 0.65
UBR4-211ENST00000467272 PHLPP1O60346 1717 aa19.08■□□□□ 0.64
UBR4-211ENST00000467272 LRP6O75581 1613 aa19.07■□□□□ 0.64
UBR4-211ENST00000467272 UNC13BO14795 1591 aa19.07■□□□□ 0.64
UBR4-211ENST00000467272 APLP2Q06481 763 aa19.07■□□□□ 0.64
UBR4-211ENST00000467272 PIK3R4Q99570 1358 aa19.06■□□□□ 0.64
UBR4-211ENST00000467272 GCC2Q8IWJ2 1684 aa19.06■□□□□ 0.64
UBR4-211ENST00000467272 MYO5BQ9ULV0 1848 aa19.06■□□□□ 0.64
UBR4-211ENST00000467272 AHDC1Q5TGY3 1603 aaPredicted RBP19.05■□□□□ 0.64
UBR4-211ENST00000467272 HDGFP51858 240 aaKnown RBP19.04■□□□□ 0.64
UBR4-211ENST00000467272 DIP2AQ14689 1571 aa19.04■□□□□ 0.64
UBR4-211ENST00000467272 SPATA31A6Q5VVP1 1343 aa19.03■□□□□ 0.64
UBR4-211ENST00000467272 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.03■□□□□ 0.64
UBR4-211ENST00000467272 C19orf44Q9H6X5 657 aa19.02■□□□□ 0.64
UBR4-211ENST00000467272 E9PCH4 1651 aa19.01■□□□□ 0.63
UBR4-211ENST00000467272 PTPRUQ92729 1446 aa19.01■□□□□ 0.63
UBR4-211ENST00000467272 ROCK1Q13464 1354 aa19.01■□□□□ 0.63
UBR4-211ENST00000467272 SETD1AO15047 1707 aaKnown RBP19■□□□□ 0.63
UBR4-211ENST00000467272 SIPA1L2Q9P2F8 1722 aaPredicted RBP19■□□□□ 0.63
UBR4-211ENST00000467272 BCANQ96GW7 911 aa19■□□□□ 0.63
UBR4-211ENST00000467272 PPP1R15AO75807 674 aaPredicted RBP18.99■□□□□ 0.63
UBR4-211ENST00000467272 CADPS2Q86UW7 1296 aa18.99■□□□□ 0.63
UBR4-211ENST00000467272 IQGAP3Q86VI3 1631 aa18.99■□□□□ 0.63
UBR4-211ENST00000467272 FAM50AQ14320 339 aaKnown RBP18.98■□□□□ 0.63
UBR4-211ENST00000467272 SHPRHQ149N8 1683 aa18.98■□□□□ 0.63
UBR4-211ENST00000467272 DCCP43146 1447 aa18.97■□□□□ 0.63
UBR4-211ENST00000467272 BRINP3Q76B58 766 aa18.96■□□□□ 0.63
UBR4-211ENST00000467272 NUTM2DQ5VT03 806 aaPredicted RBP18.95■□□□□ 0.62
UBR4-211ENST00000467272 NRXN3Q9Y4C0 1643 aa18.95■□□□□ 0.62
UBR4-211ENST00000467272 TRPM2O94759 1503 aa18.95■□□□□ 0.62
UBR4-211ENST00000467272 SRCAPQ6ZRS2 3230 aa18.94■□□□□ 0.62
UBR4-211ENST00000467272 ZNF772Q68DY9 489 aaPredicted RBP18.94■□□□□ 0.62
UBR4-211ENST00000467272 UPF1Q92900 1129 aaKnown RBP eCLIP18.94■□□□□ 0.62
UBR4-211ENST00000467272 AMOTL2Q9Y2J4 779 aa18.94■□□□□ 0.62
UBR4-211ENST00000467272 XRN1Q8IZH2 1706 aaKnown RBP18.94■□□□□ 0.62
UBR4-211ENST00000467272 SETBP1Q9Y6X0 1596 aa18.93■□□□□ 0.62
UBR4-211ENST00000467272 SETD5Q9C0A6 1442 aa18.92■□□□□ 0.62
UBR4-211ENST00000467272 ATF3P18847 181 aa18.92■□□□□ 0.62
UBR4-211ENST00000467272 MST1RQ04912 1400 aa18.91■□□□□ 0.62
UBR4-211ENST00000467272 CDK12Q9NYV4 1490 aaPredicted RBP18.91■□□□□ 0.62
UBR4-211ENST00000467272 ASXL1Q8IXJ9 1541 aa18.9■□□□□ 0.62
UBR4-211ENST00000467272 CHGAP10645 457 aaKnown RBP18.89■□□□□ 0.61
UBR4-211ENST00000467272 NUP155O75694 1391 aa18.89■□□□□ 0.61
UBR4-211ENST00000467272 C14orf37Q86TY3 774 aa18.88■□□□□ 0.61
UBR4-211ENST00000467272 METP08581 1390 aa18.88■□□□□ 0.61
UBR4-211ENST00000467272 NHSL1Q5SYE7 1610 aa18.86■□□□□ 0.61
UBR4-211ENST00000467272 RXRBP28702 533 aa18.84■□□□□ 0.61
UBR4-211ENST00000467272 MEX3CQ5U5Q3 659 aaKnown RBP18.84■□□□□ 0.61
UBR4-211ENST00000467272 ADGRL3Q9HAR2 1447 aa18.83■□□□□ 0.61
UBR4-211ENST00000467272 TRIM52Q96A61 297 aa18.82■□□□□ 0.6
UBR4-211ENST00000467272 PNPLA6Q8IY17 1366 aa18.81■□□□□ 0.6
UBR4-211ENST00000467272 AFF2P51816 1311 aa18.81■□□□□ 0.6
UBR4-211ENST00000467272 NEXMIFQ5QGS0 1516 aa18.81■□□□□ 0.6
UBR4-211ENST00000467272 LAMC1P11047 1609 aa18.81■□□□□ 0.6
UBR4-211ENST00000467272 LRRC59Q96AG4 307 aaKnown RBP18.8■□□□□ 0.6
UBR4-211ENST00000467272 PRAG1Q86YV5 1406 aa18.8■□□□□ 0.6
UBR4-211ENST00000467272 SPHKAPQ2M3C7 1700 aa18.79■□□□□ 0.6
UBR4-211ENST00000467272 RGS12O14924 1447 aa18.78■□□□□ 0.6
UBR4-211ENST00000467272 NUTM2BA6NNL0 878 aaPredicted RBP18.78■□□□□ 0.6
UBR4-211ENST00000467272 NUTM2EB1AL46 878 aaPredicted RBP18.78■□□□□ 0.6
UBR4-211ENST00000467272 NUTM2AQ8IVF1 878 aaPredicted RBP18.78■□□□□ 0.6
UBR4-211ENST00000467272 DDX17Q92841 729 aaKnown RBP18.76■□□□□ 0.59
UBR4-211ENST00000467272 NALCNQ8IZF0 1738 aa18.76■□□□□ 0.59
UBR4-211ENST00000467272 C1orf167Q5SNV9 1468 aa18.76■□□□□ 0.59
UBR4-211ENST00000467272 PTCH1Q13635 1447 aa18.75■□□□□ 0.59
UBR4-211ENST00000467272 CLTCL1P53675 1640 aa18.75■□□□□ 0.59
UBR4-211ENST00000467272 SOS2Q07890 1332 aaPredicted RBP18.74■□□□□ 0.59
UBR4-211ENST00000467272 RBM6P78332 1123 aaKnown RBP18.73■□□□□ 0.59
UBR4-211ENST00000467272 ROBO2Q9HCK4 1378 aa18.72■□□□□ 0.59
UBR4-211ENST00000467272 QTRT2Q9H974 415 aaKnown RBP18.72■□□□□ 0.59
UBR4-211ENST00000467272 EP400Q96L91 3159 aa18.72■□□□□ 0.59
UBR4-211ENST00000467272 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
UBR4-211ENST00000467272 C8orf37Q96NL8 207 aa18.7■□□□□ 0.58
UBR4-211ENST00000467272 FNBP4Q8N3X1 1017 aaPredicted RBP18.68■□□□□ 0.58
UBR4-211ENST00000467272 NAIPQ13075 1403 aa18.67■□□□□ 0.58
UBR4-211ENST00000467272 ITGAEP38570 1179 aa18.67■□□□□ 0.58
UBR4-211ENST00000467272 ORAI2Q96SN7 254 aa18.67■□□□□ 0.58
UBR4-211ENST00000467272 COL22A1Q8NFW1 1626 aaPredicted RBP18.66■□□□□ 0.58
UBR4-211ENST00000467272 RRBP1Q9P2E9 1410 aaKnown RBP18.65■□□□□ 0.58
UBR4-211ENST00000467272 MYOM2P54296 1465 aa18.65■□□□□ 0.58
UBR4-211ENST00000467272 VGFO15240 615 aaPredicted RBP18.64■□□□□ 0.57
UBR4-211ENST00000467272 RPGRIP1LQ68CZ1 1315 aa18.64■□□□□ 0.57
UBR4-211ENST00000467272 ATRNO75882 1429 aa18.64■□□□□ 0.57
UBR4-211ENST00000467272 NGLY1Q96IV0 654 aa18.63■□□□□ 0.57
UBR4-211ENST00000467272 HFM1A2PYH4 1435 aa18.63■□□□□ 0.57
UBR4-211ENST00000467272 ADAMTS2O95450 1211 aa18.62■□□□□ 0.57
UBR4-211ENST00000467272 BCL9LQ86UU0 1499 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms