RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 KMT5BQ4FZB7 885 aa12.65□□□□□ -0.38
XRN1-206ENST00000467077 SPRYD7Q5W111 196 aa12.65□□□□□ -0.38
XRN1-206ENST00000467077 TRIM67Q6ZTA4 783 aa12.65□□□□□ -0.38
XRN1-206ENST00000467077 ANKLE1Q8NAG6 615 aa12.65□□□□□ -0.38
XRN1-206ENST00000467077 ZNF598Q86UK7 904 aaKnown RBP12.64□□□□□ -0.39
XRN1-206ENST00000467077 PRR20EP86478 221 aa12.63□□□□□ -0.39
XRN1-206ENST00000467077 PRR20CP86479 221 aa12.63□□□□□ -0.39
XRN1-206ENST00000467077 PRR20DP86480 221 aa12.63□□□□□ -0.39
XRN1-206ENST00000467077 PRR20BP86481 221 aa12.63□□□□□ -0.39
XRN1-206ENST00000467077 PRR20AP86496 221 aa12.63□□□□□ -0.39
XRN1-206ENST00000467077 CFAP44Q96MT7 982 aa12.63□□□□□ -0.39
XRN1-206ENST00000467077 MYT1Q01538 1121 aa12.62□□□□□ -0.39
XRN1-206ENST00000467077 ZNF697Q5TEC3 545 aa12.61□□□□□ -0.39
XRN1-206ENST00000467077 RBM46Q8TBY0 533 aaKnown RBP12.61□□□□□ -0.39
XRN1-206ENST00000467077 FAM187AA6NFU0 413 aa12.6□□□□□ -0.39
XRN1-206ENST00000467077 S1PR4O95977 384 aa12.6□□□□□ -0.39
XRN1-206ENST00000467077 PAXIP1Q6ZW49 1069 aaPredicted RBP12.6□□□□□ -0.39
XRN1-206ENST00000467077 CFHP08603 1231 aa12.58□□□□□ -0.4
XRN1-206ENST00000467077 EMID1Q96A84 441 aaPredicted RBP12.58□□□□□ -0.4
XRN1-206ENST00000467077 PPEF1O14829 653 aaPredicted RBP12.57□□□□□ -0.4
XRN1-206ENST00000467077 ACTN4O43707 911 aaKnown RBP12.57□□□□□ -0.4
XRN1-206ENST00000467077 TMEM134Q9H6X4 195 aa12.57□□□□□ -0.4
XRN1-206ENST00000467077 TNFRSF10AO00220 468 aa12.55□□□□□ -0.4
XRN1-206ENST00000467077 ADH1BP00325 375 aa12.55□□□□□ -0.4
XRN1-206ENST00000467077 NR1I2O75469 434 aa12.54□□□□□ -0.4
XRN1-206ENST00000467077 LIAT1Q6ZQX7 453 aa12.54□□□□□ -0.4
XRN1-206ENST00000467077 SLC6A16Q9GZN6 736 aa12.52□□□□□ -0.41
XRN1-206ENST00000467077 PTGDRQ13258 359 aa12.51□□□□□ -0.41
XRN1-206ENST00000467077 ADGRG1Q9Y653 693 aa12.51□□□□□ -0.41
XRN1-206ENST00000467077 RCCD1A6NED2 376 aa12.5□□□□□ -0.41
XRN1-206ENST00000467077 GDF9O60383 454 aa12.5□□□□□ -0.41
XRN1-206ENST00000467077 POTECB2RU33 542 aa12.49□□□□□ -0.41
XRN1-206ENST00000467077 MLLT3P42568 568 aaPredicted RBP12.49□□□□□ -0.41
XRN1-206ENST00000467077 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.41
XRN1-206ENST00000467077 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.45□□□□□ -0.42
XRN1-206ENST00000467077 NUTM2FA1L443 756 aa12.45□□□□□ -0.42
XRN1-206ENST00000467077 ST8SIA5O15466 376 aa12.45□□□□□ -0.42
XRN1-206ENST00000467077 LMOD2Q6P5Q4 547 aa12.45□□□□□ -0.42
XRN1-206ENST00000467077 RSPH4AQ5TD94 716 aa12.44□□□□□ -0.42
XRN1-206ENST00000467077 FOXC1Q12948 553 aa12.43□□□□□ -0.42
XRN1-206ENST00000467077 AAASQ9NRG9 546 aa12.43□□□□□ -0.42
XRN1-206ENST00000467077 FAM161AQ3B820 660 aa12.42□□□□□ -0.42
XRN1-206ENST00000467077 PLA2G2CQ5R387 149 aa12.42□□□□□ -0.42
XRN1-206ENST00000467077 SLC10A3P09131 477 aa12.41□□□□□ -0.42
XRN1-206ENST00000467077 TREML4Q6UXN2 200 aa12.41□□□□□ -0.42
XRN1-206ENST00000467077 FCHSD2O94868 740 aa12.39□□□□□ -0.43
XRN1-206ENST00000467077 SCUBE3Q8IX30 993 aa12.39□□□□□ -0.43
XRN1-206ENST00000467077 SPSB2Q99619 263 aa12.39□□□□□ -0.43
XRN1-206ENST00000467077 PUS10Q3MIT2 529 aaKnown RBP12.37□□□□□ -0.43
XRN1-206ENST00000467077 KCNV2Q8TDN2 545 aa12.37□□□□□ -0.43
XRN1-206ENST00000467077 OATP04181 439 aa12.36□□□□□ -0.43
XRN1-206ENST00000467077 PKD2L1Q9P0L9 805 aa12.36□□□□□ -0.43
XRN1-206ENST00000467077 RPIAP49247 311 aa12.35□□□□□ -0.43
XRN1-206ENST00000467077 CYP4X1Q8N118 509 aa12.34□□□□□ -0.43
XRN1-206ENST00000467077 CRIPAKQ8N1N5 446 aa12.34□□□□□ -0.43
XRN1-206ENST00000467077 PXYLP1Q8TE99 480 aa12.33□□□□□ -0.44
XRN1-206ENST00000467077 AXIN1O15169 862 aa12.32□□□□□ -0.44
XRN1-206ENST00000467077 CD2BP2O95400 341 aaKnown RBP12.32□□□□□ -0.44
XRN1-206ENST00000467077 FCF1Q9Y324 198 aaKnown RBP12.32□□□□□ -0.44
XRN1-206ENST00000467077 CTC1Q2NKJ3 1217 aa12.3□□□□□ -0.44
XRN1-206ENST00000467077 AMER1Q5JTC6 1135 aaPredicted RBP12.3□□□□□ -0.44
XRN1-206ENST00000467077 C11orf95C9JLR9 678 aaPredicted RBP12.29□□□□□ -0.44
XRN1-206ENST00000467077 WFS1O76024 890 aa12.29□□□□□ -0.44
XRN1-206ENST00000467077 AVPP01185 164 aa12.29□□□□□ -0.44
XRN1-206ENST00000467077 RDH13Q8NBN7 331 aa12.29□□□□□ -0.44
XRN1-206ENST00000467077 LCE2AQ5TA79 106 aaPredicted RBP12.28□□□□□ -0.44
XRN1-206ENST00000467077 TOR4AQ9NXH8 423 aa12.28□□□□□ -0.44
XRN1-206ENST00000467077 GMPR2Q9P2T1 348 aaKnown RBP12.28□□□□□ -0.44
XRN1-206ENST00000467077 METTL3Q86U44 580 aaKnown RBP12.27□□□□□ -0.45
XRN1-206ENST00000467077 FMNL1O95466 1100 aaPredicted RBP12.26□□□□□ -0.45
XRN1-206ENST00000467077 P3H3Q8IVL6 736 aa12.26□□□□□ -0.45
XRN1-206ENST00000467077 ZBTB24O43167 697 aaPredicted RBP12.25□□□□□ -0.45
XRN1-206ENST00000467077 DACH1Q9UI36 760 aa12.25□□□□□ -0.45
XRN1-206ENST00000467077 TTC24A2A3L6 582 aaPredicted RBP12.24□□□□□ -0.45
XRN1-206ENST00000467077 HIC1Q14526 733 aa12.24□□□□□ -0.45
XRN1-206ENST00000467077 MORN1Q5T089 497 aa12.23□□□□□ -0.45
XRN1-206ENST00000467077 ATP6V1AP38606 617 aa12.22□□□□□ -0.45
XRN1-206ENST00000467077 FUT2Q10981 343 aa12.22□□□□□ -0.45
XRN1-206ENST00000467077 STK17AQ9UEE5 414 aa12.22□□□□□ -0.45
XRN1-206ENST00000467077 DDX11L8A8MPP1 907 aa12.21□□□□□ -0.45
XRN1-206ENST00000467077 SMCPP49901 116 aaPredicted RBP12.21□□□□□ -0.45
XRN1-206ENST00000467077 INSM1Q01101 510 aaPredicted RBP12.2□□□□□ -0.46
XRN1-206ENST00000467077 THAP11Q96EK4 314 aa12.2□□□□□ -0.46
XRN1-206ENST00000467077 DAXXQ9UER7 740 aaPredicted RBP12.2□□□□□ -0.46
XRN1-206ENST00000467077 SULF1Q8IWU6 871 aa12.18□□□□□ -0.46
XRN1-206ENST00000467077 PRDM9Q9NQV7 894 aa12.18□□□□□ -0.46
XRN1-206ENST00000467077 TSHZ2Q9NRE2 1034 aa12.18□□□□□ -0.46
XRN1-206ENST00000467077 SEMA3EO15041 775 aa12.17□□□□□ -0.46
XRN1-206ENST00000467077 SLC27A5Q9Y2P5 690 aa12.17□□□□□ -0.46
XRN1-206ENST00000467077 NFX1Q12986 1120 aaKnown RBP12.16□□□□□ -0.46
XRN1-206ENST00000467077 FAM160A2Q8N612 972 aaPredicted RBP12.16□□□□□ -0.46
XRN1-206ENST00000467077 SALL2Q9Y467 1007 aaPredicted RBP12.15□□□□□ -0.46
XRN1-206ENST00000467077 WIPF1O43516 503 aa12.14□□□□□ -0.47
XRN1-206ENST00000467077 GRIPAP1Q4V328 841 aa12.14□□□□□ -0.47
XRN1-206ENST00000467077 MSS51Q4VC12 460 aa12.14□□□□□ -0.47
XRN1-206ENST00000467077 WNT7AO00755 349 aa12.13□□□□□ -0.47
XRN1-206ENST00000467077 GNPATO15228 680 aa12.13□□□□□ -0.47
XRN1-206ENST00000467077 SNIP1Q8TAD8 396 aaKnown RBP12.13□□□□□ -0.47
XRN1-206ENST00000467077 GCGRP47871 477 aa12.12□□□□□ -0.47
XRN1-206ENST00000467077 SENP2Q9HC62 589 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms