RNA–Protein interactions for RNA: ENST00000466185.1

PRPF4B-204, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,297 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-204ENST00000466185 LIMD1Q9UGP4 676 aa10.66□□□□□ -0.7
PRPF4B-204ENST00000466185 RIMBP2O15034 1052 aa10.65□□□□□ -0.7
PRPF4B-204ENST00000466185 FAM163AQ96GL9 167 aaPredicted RBP10.65□□□□□ -0.7
PRPF4B-204ENST00000466185 ZNF777Q9ULD5 760 aaPredicted RBP10.65□□□□□ -0.7
PRPF4B-204ENST00000466185 LHX6Q9UPM6 363 aa10.65□□□□□ -0.7
PRPF4B-204ENST00000466185 CD46P15529 392 aa10.64□□□□□ -0.71
PRPF4B-204ENST00000466185 TRIM26Q12899 539 aaPredicted RBP10.64□□□□□ -0.71
PRPF4B-204ENST00000466185 RIC3Q7Z5B4 369 aa10.64□□□□□ -0.71
PRPF4B-204ENST00000466185 SNRKQ9NRH2 765 aa10.64□□□□□ -0.71
PRPF4B-204ENST00000466185 PPP4R3BQ5MIZ7 849 aa10.63□□□□□ -0.71
PRPF4B-204ENST00000466185 PPP2R2DQ66LE6 453 aa10.63□□□□□ -0.71
PRPF4B-204ENST00000466185 BCL2L12Q9HB09 334 aa10.63□□□□□ -0.71
PRPF4B-204ENST00000466185 TSKSQ9UJT2 592 aa10.63□□□□□ -0.71
PRPF4B-204ENST00000466185 COG6Q9Y2V7 657 aa10.63□□□□□ -0.71
PRPF4B-204ENST00000466185 C3orf80F5H4A9 247 aa10.62□□□□□ -0.71
PRPF4B-204ENST00000466185 LCE2DQ5TA82 110 aaPredicted RBP10.62□□□□□ -0.71
PRPF4B-204ENST00000466185 SPTLC1O15269 473 aa10.61□□□□□ -0.71
PRPF4B-204ENST00000466185 TMEM259Q4ZIN3 620 aa10.61□□□□□ -0.71
PRPF4B-204ENST00000466185 NUDT18Q6ZVK8 323 aa10.61□□□□□ -0.71
PRPF4B-204ENST00000466185 SCRIBQ14160 1630 aa10.6□□□□□ -0.71
PRPF4B-204ENST00000466185 PPP1R3GB7ZBB8 358 aa10.6□□□□□ -0.71
PRPF4B-204ENST00000466185 TUSC1Q2TAM9 212 aa10.6□□□□□ -0.71
PRPF4B-204ENST00000466185 ZNF710Q8N1W2 664 aa10.6□□□□□ -0.71
PRPF4B-204ENST00000466185 PSDA5PKW4 1024 aaPredicted RBP10.59□□□□□ -0.71
PRPF4B-204ENST00000466185 DDX11L8A8MPP1 907 aa10.59□□□□□ -0.71
PRPF4B-204ENST00000466185 HRCP23327 699 aa10.59□□□□□ -0.71
PRPF4B-204ENST00000466185 DNAJB2P25686 324 aa10.59□□□□□ -0.71
PRPF4B-204ENST00000466185 RSBN1LQ6PCB5 846 aaPredicted RBP10.59□□□□□ -0.71
PRPF4B-204ENST00000466185 SULF1Q8IWU6 871 aa10.59□□□□□ -0.71
PRPF4B-204ENST00000466185 PTPREP23469 700 aa10.58□□□□□ -0.72
PRPF4B-204ENST00000466185 NUTM1Q86Y26 1132 aa10.58□□□□□ -0.72
PRPF4B-204ENST00000466185 MOXD2PA6NHM9 499 aa10.57□□□□□ -0.72
PRPF4B-204ENST00000466185 NBPF26B4DH59 902 aa10.57□□□□□ -0.72
PRPF4B-204ENST00000466185 TATDN2Q93075 761 aa10.57□□□□□ -0.72
PRPF4B-204ENST00000466185 TMEM134Q9H6X4 195 aa10.57□□□□□ -0.72
PRPF4B-204ENST00000466185 PNMA3Q9UL41 463 aa10.57□□□□□ -0.72
PRPF4B-204ENST00000466185 UNC13AQ9UPW8 1703 aa10.57□□□□□ -0.72
PRPF4B-204ENST00000466185 TRIM6-TRIM34B2RNG4 842 aa10.56□□□□□ -0.72
PRPF4B-204ENST00000466185 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
PRPF4B-204ENST00000466185 MTMR14Q8NCE2 650 aa10.56□□□□□ -0.72
PRPF4B-204ENST00000466185 SERPINA10Q9UK55 444 aa10.55□□□□□ -0.72
PRPF4B-204ENST00000466185 NDUFV2P19404 249 aa10.54□□□□□ -0.72
PRPF4B-204ENST00000466185 GJA5P36382 358 aa10.54□□□□□ -0.72
PRPF4B-204ENST00000466185 QPCTQ16769 361 aa10.54□□□□□ -0.72
PRPF4B-204ENST00000466185 PACS2Q86VP3 889 aa10.54□□□□□ -0.72
PRPF4B-204ENST00000466185 CCDC97Q96F63 343 aaPredicted RBP10.54□□□□□ -0.72
PRPF4B-204ENST00000466185 PDIA4P13667 645 aaKnown RBP10.53□□□□□ -0.72
PRPF4B-204ENST00000466185 ZNF330Q9Y3S2 320 aaPredicted RBP10.53□□□□□ -0.72
PRPF4B-204ENST00000466185 BICRAQ9NZM4 1560 aa10.52□□□□□ -0.72
PRPF4B-204ENST00000466185 SMAPO00193 183 aa10.52□□□□□ -0.73
PRPF4B-204ENST00000466185 LILRB3O75022 631 aa10.52□□□□□ -0.73
PRPF4B-204ENST00000466185 GDPD2Q9HCC8 539 aa10.52□□□□□ -0.73
PRPF4B-204ENST00000466185 PCDHB15Q9Y5E8 787 aa10.52□□□□□ -0.73
PRPF4B-204ENST00000466185 SOCS7O14512 581 aa10.5□□□□□ -0.73
PRPF4B-204ENST00000466185 PROX2Q3B8N5 592 aa10.5□□□□□ -0.73
PRPF4B-204ENST00000466185 RTL5Q5HYW3 569 aaPredicted RBP10.5□□□□□ -0.73
PRPF4B-204ENST00000466185 RDH13Q8NBN7 331 aa10.5□□□□□ -0.73
PRPF4B-204ENST00000466185 AP1G2O75843 785 aa10.49□□□□□ -0.73
PRPF4B-204ENST00000466185 KDM4AO75164 1064 aa10.48□□□□□ -0.73
PRPF4B-204ENST00000466185 HOXB1P14653 301 aaPredicted RBP10.48□□□□□ -0.73
PRPF4B-204ENST00000466185 CDAN1Q8IWY9 1227 aa10.48□□□□□ -0.73
PRPF4B-204ENST00000466185 CABLES1Q8TDN4 633 aa10.48□□□□□ -0.73
PRPF4B-204ENST00000466185 SHROOM4Q9ULL8 1493 aa10.48□□□□□ -0.73
PRPF4B-204ENST00000466185 SNPHO15079 494 aa10.47□□□□□ -0.73
PRPF4B-204ENST00000466185 KCNK17Q96T54 332 aa10.47□□□□□ -0.73
PRPF4B-204ENST00000466185 NUTM2BA6NNL0 878 aaPredicted RBP10.46□□□□□ -0.73
PRPF4B-204ENST00000466185 NUTM2EB1AL46 878 aaPredicted RBP10.46□□□□□ -0.73
PRPF4B-204ENST00000466185 ABL2P42684 1182 aa10.46□□□□□ -0.73
PRPF4B-204ENST00000466185 NUTM2DQ5VT03 806 aaPredicted RBP10.46□□□□□ -0.73
PRPF4B-204ENST00000466185 PRPF38BQ5VTL8 546 aaKnown RBP10.46□□□□□ -0.73
PRPF4B-204ENST00000466185 NUTM2AQ8IVF1 878 aaPredicted RBP10.46□□□□□ -0.73
PRPF4B-204ENST00000466185 TBC1D2BQ9UPU7 963 aa10.46□□□□□ -0.73
PRPF4B-204ENST00000466185 USP17L8P0C7I0 530 aa10.45□□□□□ -0.74
PRPF4B-204ENST00000466185 GCGRP47871 477 aa10.45□□□□□ -0.74
PRPF4B-204ENST00000466185 USP46P62068 366 aa10.45□□□□□ -0.74
PRPF4B-204ENST00000466185 WWC1Q8IX03 1113 aa10.45□□□□□ -0.74
PRPF4B-204ENST00000466185 PRM3Q9NNZ6 103 aa10.45□□□□□ -0.74
PRPF4B-204ENST00000466185 KIAA1468Q9P260 1216 aa10.45□□□□□ -0.74
PRPF4B-204ENST00000466185 HOXA2O43364 376 aa10.44□□□□□ -0.74
PRPF4B-204ENST00000466185 ST18O60284 1047 aa10.44□□□□□ -0.74
PRPF4B-204ENST00000466185 FDX1P10109 184 aa10.43□□□□□ -0.74
PRPF4B-204ENST00000466185 ZBTB3Q9H5J0 574 aa10.43□□□□□ -0.74
PRPF4B-204ENST00000466185 POM121CA8CG34 1229 aa10.42□□□□□ -0.74
PRPF4B-204ENST00000466185 NECTIN2Q92692 538 aa10.42□□□□□ -0.74
PRPF4B-204ENST00000466185 ZBED2Q9BTP6 218 aa10.42□□□□□ -0.74
PRPF4B-204ENST00000466185 PCDHGC3Q9UN70 934 aa10.42□□□□□ -0.74
PRPF4B-204ENST00000466185 ZBTB7CA1YPR0 619 aa10.41□□□□□ -0.74
PRPF4B-204ENST00000466185 SLC10A3P09131 477 aa10.41□□□□□ -0.74
PRPF4B-204ENST00000466185 SWT1Q5T5J6 900 aaKnown RBP10.41□□□□□ -0.74
PRPF4B-204ENST00000466185 RSPH4AQ5TD94 716 aa10.41□□□□□ -0.74
PRPF4B-204ENST00000466185 HLA-CQ95604 372 aa10.4□□□□□ -0.74
PRPF4B-204ENST00000466185 GJD4Q96KN9 370 aaPredicted RBP10.4□□□□□ -0.74
PRPF4B-204ENST00000466185 CALR3Q96L12 384 aaKnown RBP10.4□□□□□ -0.74
PRPF4B-204ENST00000466185 KCNH8Q96L42 1107 aa10.4□□□□□ -0.74
PRPF4B-204ENST00000466185 TRAIPQ9BWF2 469 aa10.4□□□□□ -0.74
PRPF4B-204ENST00000466185 GUCA2AQ02747 115 aa10.39□□□□□ -0.75
PRPF4B-204ENST00000466185 PSEN2P49810 448 aa10.38□□□□□ -0.75
PRPF4B-204ENST00000466185 GLMNQ92990 594 aa10.38□□□□□ -0.75
PRPF4B-204ENST00000466185 NDUFB9Q9Y6M9 179 aa10.38□□□□□ -0.75
PRPF4B-204ENST00000466185 CTDSPL2Q05D32 466 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms