RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.62■□□□□ 0.73
SRM-203ENST00000465788 BCANQ96GW7 911 aa19.62■□□□□ 0.73
SRM-203ENST00000465788 MYO5BQ9ULV0 1848 aa19.62■□□□□ 0.73
SRM-203ENST00000465788 TMEM131LA2VDJ0 1609 aa19.62■□□□□ 0.73
SRM-203ENST00000465788 ZFYVE9O95405 1425 aa19.61■□□□□ 0.73
SRM-203ENST00000465788 TMEM94Q12767 1356 aa19.61■□□□□ 0.73
SRM-203ENST00000465788 PROSER2Q86WR7 435 aaPredicted RBP19.61■□□□□ 0.73
SRM-203ENST00000465788 SLC26A8Q96RN1 970 aa19.61■□□□□ 0.73
SRM-203ENST00000465788 FAM135BQ49AJ0 1406 aa19.6■□□□□ 0.73
SRM-203ENST00000465788 RIMS2Q9UQ26 1411 aa19.6■□□□□ 0.73
SRM-203ENST00000465788 E9PCH4 1651 aa19.6■□□□□ 0.73
SRM-203ENST00000465788 PPP1R15AO75807 674 aaPredicted RBP19.6■□□□□ 0.73
SRM-203ENST00000465788 PHF23Q9BUL5 403 aaPredicted RBP19.6■□□□□ 0.73
SRM-203ENST00000465788 CHD2O14647 1828 aaKnown RBP19.57■□□□□ 0.72
SRM-203ENST00000465788 NUP155O75694 1391 aa19.57■□□□□ 0.72
SRM-203ENST00000465788 DIP2AQ14689 1571 aa19.56■□□□□ 0.72
SRM-203ENST00000465788 MSH6P52701 1360 aa19.56■□□□□ 0.72
SRM-203ENST00000465788 TBX22Q9Y458 520 aa19.55■□□□□ 0.72
SRM-203ENST00000465788 NCOA3Q9Y6Q9 1424 aa19.54■□□□□ 0.72
SRM-203ENST00000465788 CHGAP10645 457 aaKnown RBP19.54■□□□□ 0.72
SRM-203ENST00000465788 PIK3R4Q99570 1358 aa19.53■□□□□ 0.72
SRM-203ENST00000465788 ITGAEP38570 1179 aa19.51■□□□□ 0.71
SRM-203ENST00000465788 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
SRM-203ENST00000465788 ROBO1Q9Y6N7 1651 aa19.51■□□□□ 0.71
SRM-203ENST00000465788 SPHKAPQ2M3C7 1700 aa19.48■□□□□ 0.71
SRM-203ENST00000465788 TRPM2O94759 1503 aa19.46■□□□□ 0.71
SRM-203ENST00000465788 ADAMTS13Q76LX8 1427 aa19.46■□□□□ 0.71
SRM-203ENST00000465788 SLAIN2Q9P270 581 aa19.46■□□□□ 0.71
SRM-203ENST00000465788 RRBP1Q9P2E9 1410 aaKnown RBP19.45■□□□□ 0.7
SRM-203ENST00000465788 RBM33Q96EV2 1170 aaKnown RBP19.43■□□□□ 0.7
SRM-203ENST00000465788 C14orf37Q86TY3 774 aa19.42■□□□□ 0.7
SRM-203ENST00000465788 CADPS2Q86UW7 1296 aa19.42■□□□□ 0.7
SRM-203ENST00000465788 PHLPP1O60346 1717 aa19.42■□□□□ 0.7
SRM-203ENST00000465788 PPARGC1BQ86YN6 1023 aaKnown RBP19.41■□□□□ 0.7
SRM-203ENST00000465788 C19orf44Q9H6X5 657 aa19.41■□□□□ 0.7
SRM-203ENST00000465788 SETBP1Q9Y6X0 1596 aa19.4■□□□□ 0.7
SRM-203ENST00000465788 ATF3P18847 181 aa19.39■□□□□ 0.69
SRM-203ENST00000465788 NUTM2DQ5VT03 806 aaPredicted RBP19.39■□□□□ 0.69
SRM-203ENST00000465788 JCADQ9P266 1359 aa19.39■□□□□ 0.69
SRM-203ENST00000465788 ZNF326Q5BKZ1 582 aaKnown RBP19.38■□□□□ 0.69
SRM-203ENST00000465788 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.38■□□□□ 0.69
SRM-203ENST00000465788 KIF1BO60333 1816 aa19.37■□□□□ 0.69
SRM-203ENST00000465788 DCCP43146 1447 aa19.37■□□□□ 0.69
SRM-203ENST00000465788 NAIPQ13075 1403 aa19.37■□□□□ 0.69
SRM-203ENST00000465788 AMOTL2Q9Y2J4 779 aa19.37■□□□□ 0.69
SRM-203ENST00000465788 XRN1Q8IZH2 1706 aaKnown RBP19.34■□□□□ 0.69
SRM-203ENST00000465788 NRXN3Q9Y4C0 1643 aa19.34■□□□□ 0.69
SRM-203ENST00000465788 HFM1A2PYH4 1435 aa19.34■□□□□ 0.69
SRM-203ENST00000465788 CLTCL1P53675 1640 aa19.33■□□□□ 0.69
SRM-203ENST00000465788 COL16A1Q07092 1604 aaPredicted RBP19.33■□□□□ 0.69
SRM-203ENST00000465788 AHDC1Q5TGY3 1603 aaPredicted RBP19.33■□□□□ 0.69
SRM-203ENST00000465788 RGS17Q9UGC6 210 aaPredicted RBP19.33■□□□□ 0.68
SRM-203ENST00000465788 PTPRUQ92729 1446 aa19.33■□□□□ 0.68
SRM-203ENST00000465788 NEXMIFQ5QGS0 1516 aa19.31■□□□□ 0.68
SRM-203ENST00000465788 SPATA31A6Q5VVP1 1343 aa19.31■□□□□ 0.68
SRM-203ENST00000465788 TRIM52Q96A61 297 aa19.29■□□□□ 0.68
SRM-203ENST00000465788 VGFO15240 615 aaPredicted RBP19.28■□□□□ 0.68
SRM-203ENST00000465788 RPGRIP1LQ68CZ1 1315 aa19.27■□□□□ 0.68
SRM-203ENST00000465788 SHPRHQ149N8 1683 aa19.27■□□□□ 0.68
SRM-203ENST00000465788 METP08581 1390 aa19.26■□□□□ 0.67
SRM-203ENST00000465788 SLC4A1APQ9BWU0 796 aaKnown RBP19.25■□□□□ 0.67
SRM-203ENST00000465788 ADGRL3Q9HAR2 1447 aa19.25■□□□□ 0.67
SRM-203ENST00000465788 POTEAQ6S8J7 498 aa19.24■□□□□ 0.67
SRM-203ENST00000465788 BRINP3Q76B58 766 aa19.24■□□□□ 0.67
SRM-203ENST00000465788 ACIN1Q9UKV3 1341 aaKnown RBP19.23■□□□□ 0.67
SRM-203ENST00000465788 ASXL1Q8IXJ9 1541 aa19.22■□□□□ 0.67
SRM-203ENST00000465788 MEX3CQ5U5Q3 659 aaKnown RBP19.22■□□□□ 0.67
SRM-203ENST00000465788 MST1RQ04912 1400 aa19.22■□□□□ 0.67
SRM-203ENST00000465788 PTCH1Q13635 1447 aa19.22■□□□□ 0.67
SRM-203ENST00000465788 NHSL1Q5SYE7 1610 aa19.21■□□□□ 0.67
SRM-203ENST00000465788 PRAG1Q86YV5 1406 aa19.2■□□□□ 0.66
SRM-203ENST00000465788 ZNF772Q68DY9 489 aaPredicted RBP19.2■□□□□ 0.66
SRM-203ENST00000465788 PPLO60437 1756 aa19.19■□□□□ 0.66
SRM-203ENST00000465788 SETD5Q9C0A6 1442 aa19.19■□□□□ 0.66
SRM-203ENST00000465788 NALCNQ8IZF0 1738 aa19.19■□□□□ 0.66
SRM-203ENST00000465788 SETD1AO15047 1707 aaKnown RBP19.18■□□□□ 0.66
SRM-203ENST00000465788 LRRC59Q96AG4 307 aaKnown RBP19.17■□□□□ 0.66
SRM-203ENST00000465788 LRP6O75581 1613 aa19.17■□□□□ 0.66
SRM-203ENST00000465788 CCDC144AA2RUR9 1427 aa19.16■□□□□ 0.66
SRM-203ENST00000465788 C1orf167Q5SNV9 1468 aa19.12■□□□□ 0.65
SRM-203ENST00000465788 LAMC1P11047 1609 aa19.11■□□□□ 0.65
SRM-203ENST00000465788 ANKRD30BQ9BXX2 1392 aa19.11■□□□□ 0.65
SRM-203ENST00000465788 ROBO2Q9HCK4 1378 aa19.11■□□□□ 0.65
SRM-203ENST00000465788 NUTM2BA6NNL0 878 aaPredicted RBP19.09■□□□□ 0.65
SRM-203ENST00000465788 NUTM2EB1AL46 878 aaPredicted RBP19.09■□□□□ 0.65
SRM-203ENST00000465788 NUTM2AQ8IVF1 878 aaPredicted RBP19.09■□□□□ 0.65
SRM-203ENST00000465788 MPHOSPH9Q99550 1183 aa19.08■□□□□ 0.64
SRM-203ENST00000465788 PNPLA6Q8IY17 1366 aa19.07■□□□□ 0.64
SRM-203ENST00000465788 CDK12Q9NYV4 1490 aaPredicted RBP19.07■□□□□ 0.64
SRM-203ENST00000465788 SPATA31E1Q6ZUB1 1445 aa19.07■□□□□ 0.64
SRM-203ENST00000465788 CDC42BPGQ6DT37 1551 aa19.06■□□□□ 0.64
SRM-203ENST00000465788 IFT172Q9UG01 1749 aa19.06■□□□□ 0.64
SRM-203ENST00000465788 RXRBP28702 533 aa19.06■□□□□ 0.64
SRM-203ENST00000465788 AFF2P51816 1311 aa19.04■□□□□ 0.64
SRM-203ENST00000465788 TECPR2O15040 1411 aa19.04■□□□□ 0.64
SRM-203ENST00000465788 FOXD1Q16676 465 aa19.04■□□□□ 0.64
SRM-203ENST00000465788 SOS2Q07890 1332 aaPredicted RBP19.03■□□□□ 0.64
SRM-203ENST00000465788 RGL3Q3MIN7 710 aa19.03■□□□□ 0.64
SRM-203ENST00000465788 KNDC1Q76NI1 1749 aa19.03■□□□□ 0.64
SRM-203ENST00000465788 ADGRF5Q8IZF2 1346 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms