RNA–Protein interactions for RNA: ENST00000465768.1

SAMM50-202, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 169 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-202ENST00000465768 PRKD2Q9BZL6 878 aa8.35□□□□□ -1.07
SAMM50-202ENST00000465768 V9GY48 417 aaPredicted RBP8.35□□□□□ -1.07
SAMM50-202ENST00000465768 PPP1R18Q6NYC8 613 aa8.34□□□□□ -1.07
SAMM50-202ENST00000465768 PRR14Q9BWN1 585 aa8.34□□□□□ -1.07
SAMM50-202ENST00000465768 GGCXP38435 758 aa8.33□□□□□ -1.08
SAMM50-202ENST00000465768 SWT1Q5T5J6 900 aaKnown RBP8.33□□□□□ -1.08
SAMM50-202ENST00000465768 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.33□□□□□ -1.08
SAMM50-202ENST00000465768 NRG2O14511 850 aaPredicted RBP8.32□□□□□ -1.08
SAMM50-202ENST00000465768 GFRA3O60609 400 aa8.32□□□□□ -1.08
SAMM50-202ENST00000465768 SLC24A3Q9HC58 644 aa8.32□□□□□ -1.08
SAMM50-202ENST00000465768 NPDC1Q9NQX5 325 aaPredicted RBP8.32□□□□□ -1.08
SAMM50-202ENST00000465768 ZNF516Q92618 1163 aa8.3□□□□□ -1.08
SAMM50-202ENST00000465768 EYA1Q99502 592 aa8.29□□□□□ -1.08
SAMM50-202ENST00000465768 TRAF7Q6Q0C0 670 aa8.28□□□□□ -1.08
SAMM50-202ENST00000465768 TMUB1Q9BVT8 246 aa8.28□□□□□ -1.08
SAMM50-202ENST00000465768 NUTM2FA1L443 756 aa8.27□□□□□ -1.09
SAMM50-202ENST00000465768 BRPF1P55201 1214 aaPredicted RBP8.27□□□□□ -1.09
SAMM50-202ENST00000465768 COPS2P61201 443 aa8.27□□□□□ -1.09
SAMM50-202ENST00000465768 DNAJB2P25686 324 aa8.26□□□□□ -1.09
SAMM50-202ENST00000465768 AK7Q96M32 723 aa8.26□□□□□ -1.09
SAMM50-202ENST00000465768 LCE2BO14633 110 aa8.25□□□□□ -1.09
SAMM50-202ENST00000465768 ZPR1O75312 459 aa8.25□□□□□ -1.09
SAMM50-202ENST00000465768 FCHSD2O94868 740 aa8.25□□□□□ -1.09
SAMM50-202ENST00000465768 PTGDRQ13258 359 aa8.25□□□□□ -1.09
SAMM50-202ENST00000465768 HIC1Q14526 733 aa8.25□□□□□ -1.09
SAMM50-202ENST00000465768 NKX2-3Q8TAU0 364 aa8.25□□□□□ -1.09
SAMM50-202ENST00000465768 RBM46Q8TBY0 533 aaKnown RBP8.25□□□□□ -1.09
SAMM50-202ENST00000465768 PCDHB3Q9Y5E6 796 aa8.25□□□□□ -1.09
SAMM50-202ENST00000465768 GNPATO15228 680 aa8.24□□□□□ -1.09
SAMM50-202ENST00000465768 MAP2K5Q13163 448 aa8.23□□□□□ -1.09
SAMM50-202ENST00000465768 KRI1Q8N9T8 703 aaKnown RBP8.23□□□□□ -1.09
SAMM50-202ENST00000465768 KMT5BQ4FZB7 885 aa8.22□□□□□ -1.09
SAMM50-202ENST00000465768 TMEM134Q9H6X4 195 aa8.22□□□□□ -1.09
SAMM50-202ENST00000465768 PDZRN3Q9UPQ7 1066 aa8.22□□□□□ -1.09
SAMM50-202ENST00000465768 MINK1Q8N4C8 1332 aaPredicted RBP8.22□□□□□ -1.09
SAMM50-202ENST00000465768 NEUROD2Q15784 382 aa8.21□□□□□ -1.1
SAMM50-202ENST00000465768 ADGRG1Q9Y653 693 aa8.21□□□□□ -1.1
SAMM50-202ENST00000465768 TRIM66O15016 1216 aa8.2□□□□□ -1.1
SAMM50-202ENST00000465768 TMEM132AQ24JP5 1023 aa8.2□□□□□ -1.1
SAMM50-202ENST00000465768 BLOC1S3Q6QNY0 202 aa8.2□□□□□ -1.1
SAMM50-202ENST00000465768 ACTN4O43707 911 aaKnown RBP8.19□□□□□ -1.1
SAMM50-202ENST00000465768 CCDC102AQ96A19 550 aa8.19□□□□□ -1.1
SAMM50-202ENST00000465768 IRF6O14896 467 aa8.18□□□□□ -1.1
SAMM50-202ENST00000465768 FECHP22830 423 aa8.18□□□□□ -1.1
SAMM50-202ENST00000465768 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.17□□□□□ -1.1
SAMM50-202ENST00000465768 RCCD1A6NED2 376 aa8.17□□□□□ -1.1
SAMM50-202ENST00000465768 RNF223E7ERA6 249 aa8.17□□□□□ -1.1
SAMM50-202ENST00000465768 CFHP08603 1231 aa8.17□□□□□ -1.1
SAMM50-202ENST00000465768 TLL1O43897 1013 aa8.16□□□□□ -1.1
SAMM50-202ENST00000465768 PDE4DQ08499 809 aa8.16□□□□□ -1.1
SAMM50-202ENST00000465768 ANKLE1Q8NAG6 615 aa8.16□□□□□ -1.1
SAMM50-202ENST00000465768 SLC19A1P41440 591 aa8.15□□□□□ -1.1
SAMM50-202ENST00000465768 AMHR2Q16671 573 aa8.15□□□□□ -1.1
SAMM50-202ENST00000465768 NR1I2O75469 434 aa8.13□□□□□ -1.11
SAMM50-202ENST00000465768 ADH1BP00325 375 aa8.13□□□□□ -1.11
SAMM50-202ENST00000465768 PRR20EP86478 221 aa8.13□□□□□ -1.11
SAMM50-202ENST00000465768 PRR20CP86479 221 aa8.13□□□□□ -1.11
SAMM50-202ENST00000465768 PRR20DP86480 221 aa8.13□□□□□ -1.11
SAMM50-202ENST00000465768 PRR20BP86481 221 aa8.13□□□□□ -1.11
SAMM50-202ENST00000465768 PRR20AP86496 221 aa8.13□□□□□ -1.11
SAMM50-202ENST00000465768 GPBP1L1Q9HC44 474 aaPredicted RBP8.13□□□□□ -1.11
SAMM50-202ENST00000465768 S1PR4O95977 384 aa8.12□□□□□ -1.11
SAMM50-202ENST00000465768 OATP04181 439 aa8.12□□□□□ -1.11
SAMM50-202ENST00000465768 SPRYD7Q5W111 196 aa8.12□□□□□ -1.11
SAMM50-202ENST00000465768 TRIM67Q6ZTA4 783 aa8.12□□□□□ -1.11
SAMM50-202ENST00000465768 KDM4CQ9H3R0 1056 aa8.12□□□□□ -1.11
SAMM50-202ENST00000465768 RSPH4AQ5TD94 716 aa8.11□□□□□ -1.11
SAMM50-202ENST00000465768 ZNF598Q86UK7 904 aaKnown RBP8.11□□□□□ -1.11
SAMM50-202ENST00000465768 SLC10A3P09131 477 aa8.1□□□□□ -1.11
SAMM50-202ENST00000465768 PKDCCQ504Y2 493 aa8.1□□□□□ -1.11
SAMM50-202ENST00000465768 ZNF787Q6DD87 383 aa8.1□□□□□ -1.11
SAMM50-202ENST00000465768 PXYLP1Q8TE99 480 aa8.1□□□□□ -1.11
SAMM50-202ENST00000465768 EMID1Q96A84 441 aaPredicted RBP8.1□□□□□ -1.11
SAMM50-202ENST00000465768 DGAT1O75907 488 aa8.09□□□□□ -1.11
SAMM50-202ENST00000465768 FAM161AQ3B820 660 aa8.09□□□□□ -1.11
SAMM50-202ENST00000465768 PARP9Q8IXQ6 854 aa8.09□□□□□ -1.11
SAMM50-202ENST00000465768 SLC6A16Q9GZN6 736 aa8.09□□□□□ -1.11
SAMM50-202ENST00000465768 DAXXQ9UER7 740 aaPredicted RBP8.09□□□□□ -1.11
SAMM50-202ENST00000465768 ZNF697Q5TEC3 545 aa8.08□□□□□ -1.12
SAMM50-202ENST00000465768 METTL3Q86U44 580 aaKnown RBP8.07□□□□□ -1.12
SAMM50-202ENST00000465768 PPEF1O14829 653 aaPredicted RBP8.05□□□□□ -1.12
SAMM50-202ENST00000465768 TTLL12Q14166 644 aaPredicted RBP8.05□□□□□ -1.12
SAMM50-202ENST00000465768 LIAT1Q6ZQX7 453 aa8.05□□□□□ -1.12
SAMM50-202ENST00000465768 GDF9O60383 454 aa8.04□□□□□ -1.12
SAMM50-202ENST00000465768 MYT1Q01538 1121 aa8.04□□□□□ -1.12
SAMM50-202ENST00000465768 PHOX2BQ99453 314 aa8.04□□□□□ -1.12
SAMM50-202ENST00000465768 SPSB2Q99619 263 aa8.04□□□□□ -1.12
SAMM50-202ENST00000465768 CLCN1P35523 988 aa8.03□□□□□ -1.12
SAMM50-202ENST00000465768 GIGYF2Q6Y7W6 1299 aaKnown RBP8.03□□□□□ -1.12
SAMM50-202ENST00000465768 SCUBE3Q8IX30 993 aa8.03□□□□□ -1.12
SAMM50-202ENST00000465768 GTF3C3Q9Y5Q9 886 aa8.03□□□□□ -1.12
SAMM50-202ENST00000465768 FAM187AA6NFU0 413 aa8.02□□□□□ -1.13
SAMM50-202ENST00000465768 DDRGK1Q96HY6 314 aa8.02□□□□□ -1.13
SAMM50-202ENST00000465768 GPCPD1Q9NPB8 672 aa8.02□□□□□ -1.13
SAMM50-202ENST00000465768 TNFRSF10AO00220 468 aa8.01□□□□□ -1.13
SAMM50-202ENST00000465768 PUS10Q3MIT2 529 aaKnown RBP8.01□□□□□ -1.13
SAMM50-202ENST00000465768 PLA2G2CQ5R387 149 aa8.01□□□□□ -1.13
SAMM50-202ENST00000465768 RDH13Q8NBN7 331 aa8.01□□□□□ -1.13
SAMM50-202ENST00000465768 REPIN1Q9BWE0 567 aaKnown RBP8.01□□□□□ -1.13
SAMM50-202ENST00000465768 FAM117AQ9C073 453 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms