RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 IL27Q8NEV9 243 aa12.08□□□□□ -0.48
SPTA1-203ENST00000465741 ANKK1Q8NFD2 765 aa12.08□□□□□ -0.48
SPTA1-203ENST00000465741 SOWAHBA6NEL2 793 aa12.06□□□□□ -0.48
SPTA1-203ENST00000465741 ERICH6Q7L0X2 663 aa12.06□□□□□ -0.48
SPTA1-203ENST00000465741 METTL3Q86U44 580 aaKnown RBP12.06□□□□□ -0.48
SPTA1-203ENST00000465741 GPCPD1Q9NPB8 672 aa12.06□□□□□ -0.48
SPTA1-203ENST00000465741 ADGRG1Q9Y653 693 aa12.06□□□□□ -0.48
SPTA1-203ENST00000465741 GIGYF2Q6Y7W6 1299 aaKnown RBP12.05□□□□□ -0.48
SPTA1-203ENST00000465741 RBM46Q8TBY0 533 aaKnown RBP12.05□□□□□ -0.48
SPTA1-203ENST00000465741 KIAA1468Q9P260 1216 aa12.05□□□□□ -0.48
SPTA1-203ENST00000465741 LAPTM4BQ86VI4 370 aa12.03□□□□□ -0.48
SPTA1-203ENST00000465741 PXYLP1Q8TE99 480 aa12.03□□□□□ -0.48
SPTA1-203ENST00000465741 ZFRQ96KR1 1074 aaKnown RBP12.03□□□□□ -0.48
SPTA1-203ENST00000465741 FAM117AQ9C073 453 aa12.03□□□□□ -0.48
SPTA1-203ENST00000465741 MDM2Q00987 491 aaPredicted RBP12.02□□□□□ -0.49
SPTA1-203ENST00000465741 WBP1LQ9NX94 342 aa12.02□□□□□ -0.49
SPTA1-203ENST00000465741 FAM161AQ3B820 660 aa12.01□□□□□ -0.49
SPTA1-203ENST00000465741 SEPT9Q9UHD8 586 aaPredicted RBP12.01□□□□□ -0.49
SPTA1-203ENST00000465741 NBPF26B4DH59 902 aa12□□□□□ -0.49
SPTA1-203ENST00000465741 PHOX2BQ99453 314 aa12□□□□□ -0.49
SPTA1-203ENST00000465741 TMUB1Q9BVT8 246 aa12□□□□□ -0.49
SPTA1-203ENST00000465741 SCRIBQ14160 1630 aa12□□□□□ -0.49
SPTA1-203ENST00000465741 TRIM6-TRIM34B2RNG4 842 aa11.99□□□□□ -0.49
SPTA1-203ENST00000465741 PACS2Q86VP3 889 aa11.99□□□□□ -0.49
SPTA1-203ENST00000465741 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.98□□□□□ -0.49
SPTA1-203ENST00000465741 ONECUT3O60422 494 aaPredicted RBP11.98□□□□□ -0.49
SPTA1-203ENST00000465741 REPIN1Q9BWE0 567 aaKnown RBP11.97□□□□□ -0.49
SPTA1-203ENST00000465741 TSKSQ9UJT2 592 aa11.97□□□□□ -0.49
SPTA1-203ENST00000465741 MS4A1P11836 297 aa11.96□□□□□ -0.49
SPTA1-203ENST00000465741 PLEKHG3A1L390 1219 aa11.95□□□□□ -0.5
SPTA1-203ENST00000465741 NYAP1Q6ZVC0 841 aa11.95□□□□□ -0.5
SPTA1-203ENST00000465741 FAM198AQ9UFP1 575 aa11.95□□□□□ -0.5
SPTA1-203ENST00000465741 SSTR3P32745 418 aaPredicted RBP11.94□□□□□ -0.5
SPTA1-203ENST00000465741 NUDT18Q6ZVK8 323 aa11.94□□□□□ -0.5
SPTA1-203ENST00000465741 PNMA3Q9UL41 463 aa11.94□□□□□ -0.5
SPTA1-203ENST00000465741 KCNC4Q03721 635 aa11.93□□□□□ -0.5
SPTA1-203ENST00000465741 TATDN2Q93075 761 aa11.93□□□□□ -0.5
SPTA1-203ENST00000465741 EYA1Q99502 592 aa11.93□□□□□ -0.5
SPTA1-203ENST00000465741 GOPCQ9HD26 462 aa11.93□□□□□ -0.5
SPTA1-203ENST00000465741 FAM217BQ9NTX9 383 aaPredicted RBP11.93□□□□□ -0.5
SPTA1-203ENST00000465741 RCCD1A6NED2 376 aa11.92□□□□□ -0.5
SPTA1-203ENST00000465741 LCE2BO14633 110 aa11.92□□□□□ -0.5
SPTA1-203ENST00000465741 DNAJB2P25686 324 aa11.92□□□□□ -0.5
SPTA1-203ENST00000465741 FAM98CQ17RN3 349 aaKnown RBP11.92□□□□□ -0.5
SPTA1-203ENST00000465741 NLRP7Q8WX94 980 aa11.91□□□□□ -0.5
SPTA1-203ENST00000465741 Q6ZNB5 142 aa11.9□□□□□ -0.5
SPTA1-203ENST00000465741 HPS5Q9UPZ3 1129 aa11.9□□□□□ -0.5
SPTA1-203ENST00000465741 RSPH6AQ9H0K4 717 aa11.89□□□□□ -0.51
SPTA1-203ENST00000465741 SULF1Q8IWU6 871 aa11.88□□□□□ -0.51
SPTA1-203ENST00000465741 BEGAINQ9BUH8 593 aa11.88□□□□□ -0.51
SPTA1-203ENST00000465741 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.88□□□□□ -0.51
SPTA1-203ENST00000465741 TSR3Q9UJK0 312 aaKnown RBP11.88□□□□□ -0.51
SPTA1-203ENST00000465741 TIMELESSQ9UNS1 1208 aa11.87□□□□□ -0.51
SPTA1-203ENST00000465741 UNC13AQ9UPW8 1703 aa11.86□□□□□ -0.51
SPTA1-203ENST00000465741 LRCH3Q96II8 777 aa11.86□□□□□ -0.51
SPTA1-203ENST00000465741 PCMTD1Q96MG8 357 aaPredicted RBP11.86□□□□□ -0.51
SPTA1-203ENST00000465741 DIXDC1Q155Q3 683 aa11.85□□□□□ -0.51
SPTA1-203ENST00000465741 SH3D19Q5HYK7 790 aa11.85□□□□□ -0.51
SPTA1-203ENST00000465741 C14orf37Q86TY3 774 aa11.85□□□□□ -0.51
SPTA1-203ENST00000465741 TMEM134Q9H6X4 195 aa11.85□□□□□ -0.51
SPTA1-203ENST00000465741 SMAPO00193 183 aa11.83□□□□□ -0.52
SPTA1-203ENST00000465741 C3orf80F5H4A9 247 aa11.82□□□□□ -0.52
SPTA1-203ENST00000465741 DDX11L8A8MPP1 907 aa11.8□□□□□ -0.52
SPTA1-203ENST00000465741 HDGFP51858 240 aaKnown RBP11.8□□□□□ -0.52
SPTA1-203ENST00000465741 SKIV2LQ15477 1246 aaKnown RBP11.8□□□□□ -0.52
SPTA1-203ENST00000465741 TJAP1Q5JTD0 557 aa11.8□□□□□ -0.52
SPTA1-203ENST00000465741 RSPH4AQ5TD94 716 aa11.8□□□□□ -0.52
SPTA1-203ENST00000465741 CD46P15529 392 aa11.79□□□□□ -0.52
SPTA1-203ENST00000465741 SLC4A3P48751 1232 aa11.79□□□□□ -0.52
SPTA1-203ENST00000465741 SUPT5HO00267 1087 aaKnown RBP11.77□□□□□ -0.53
SPTA1-203ENST00000465741 BICRAQ9NZM4 1560 aa11.76□□□□□ -0.53
SPTA1-203ENST00000465741 SAMD7Q7Z3H4 446 aa11.76□□□□□ -0.53
SPTA1-203ENST00000465741 RDH13Q8NBN7 331 aa11.76□□□□□ -0.53
SPTA1-203ENST00000465741 TBC1D2Q9BYX2 928 aa11.76□□□□□ -0.53
SPTA1-203ENST00000465741 ATP1B4Q9UN42 357 aaPredicted RBP11.76□□□□□ -0.53
SPTA1-203ENST00000465741 MYSM1Q5VVJ2 828 aa11.75□□□□□ -0.53
SPTA1-203ENST00000465741 NUTM1Q86Y26 1132 aa11.75□□□□□ -0.53
SPTA1-203ENST00000465741 PPP4CP60510 307 aa11.74□□□□□ -0.53
SPTA1-203ENST00000465741 GFRA3O60609 400 aa11.73□□□□□ -0.53
SPTA1-203ENST00000465741 CLK2P49760 499 aaKnown RBP11.73□□□□□ -0.53
SPTA1-203ENST00000465741 SWT1Q5T5J6 900 aaKnown RBP11.73□□□□□ -0.53
SPTA1-203ENST00000465741 LAPTM4AQ15012 233 aa11.72□□□□□ -0.53
SPTA1-203ENST00000465741 SLF2Q8IX21 1173 aa11.72□□□□□ -0.53
SPTA1-203ENST00000465741 SPIRE2Q8WWL2 714 aa11.72□□□□□ -0.53
SPTA1-203ENST00000465741 MTRQ99707 1265 aa11.72□□□□□ -0.53
SPTA1-203ENST00000465741 POLR3EQ9NVU0 708 aa11.72□□□□□ -0.53
SPTA1-203ENST00000465741 FLIIQ13045 1269 aa11.71□□□□□ -0.53
SPTA1-203ENST00000465741 PRKD2Q9BZL6 878 aa11.71□□□□□ -0.53
SPTA1-203ENST00000465741 CECR2Q9BXF3 1484 aa11.7□□□□□ -0.54
SPTA1-203ENST00000465741 TRAF7Q6Q0C0 670 aa11.7□□□□□ -0.54
SPTA1-203ENST00000465741 PPP1R18Q6NYC8 613 aa11.69□□□□□ -0.54
SPTA1-203ENST00000465741 ZNF516Q92618 1163 aa11.69□□□□□ -0.54
SPTA1-203ENST00000465741 USP46P62068 366 aa11.68□□□□□ -0.54
SPTA1-203ENST00000465741 NECTIN2Q92692 538 aa11.68□□□□□ -0.54
SPTA1-203ENST00000465741 KDM4AO75164 1064 aa11.67□□□□□ -0.54
SPTA1-203ENST00000465741 GCGRP47871 477 aa11.67□□□□□ -0.54
SPTA1-203ENST00000465741 RIC3Q7Z5B4 369 aa11.67□□□□□ -0.54
SPTA1-203ENST00000465741 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.67□□□□□ -0.54
SPTA1-203ENST00000465741 IL21Q9HBE4 155 aa11.67□□□□□ -0.54
SPTA1-203ENST00000465741 GJA5P36382 358 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms