RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 RBM33Q96EV2 1170 aaKnown RBP4.33□□□□□ -1.72
NUCKS1-202ENST00000464938 PRR20EP86478 221 aa4.32□□□□□ -1.72
NUCKS1-202ENST00000464938 PRR20CP86479 221 aa4.32□□□□□ -1.72
NUCKS1-202ENST00000464938 PRR20DP86480 221 aa4.32□□□□□ -1.72
NUCKS1-202ENST00000464938 PRR20BP86481 221 aa4.32□□□□□ -1.72
NUCKS1-202ENST00000464938 PRR20AP86496 221 aa4.32□□□□□ -1.72
NUCKS1-202ENST00000464938 TREML4Q6UXN2 200 aa4.32□□□□□ -1.72
NUCKS1-202ENST00000464938 TMUB1Q9BVT8 246 aa4.32□□□□□ -1.72
NUCKS1-202ENST00000464938 SLC24A3Q9HC58 644 aa4.32□□□□□ -1.72
NUCKS1-202ENST00000464938 NPDC1Q9NQX5 325 aaPredicted RBP4.32□□□□□ -1.72
NUCKS1-202ENST00000464938 CDCA7LQ96GN5 454 aa4.31□□□□□ -1.72
NUCKS1-202ENST00000464938 DGAT1O75907 488 aa4.3□□□□□ -1.72
NUCKS1-202ENST00000464938 BRPF1P55201 1214 aaPredicted RBP4.3□□□□□ -1.72
NUCKS1-202ENST00000464938 PRSS12P56730 875 aa4.3□□□□□ -1.72
NUCKS1-202ENST00000464938 PTGDRQ13258 359 aa4.3□□□□□ -1.72
NUCKS1-202ENST00000464938 TATDN2Q93075 761 aa4.3□□□□□ -1.72
NUCKS1-202ENST00000464938 AK7Q96M32 723 aa4.3□□□□□ -1.72
NUCKS1-202ENST00000464938 MINK1Q8N4C8 1332 aaPredicted RBP4.29□□□□□ -1.72
NUCKS1-202ENST00000464938 NUTM2FA1L443 756 aa4.29□□□□□ -1.72
NUCKS1-202ENST00000464938 RNF223E7ERA6 249 aa4.29□□□□□ -1.72
NUCKS1-202ENST00000464938 GNPATO15228 680 aa4.29□□□□□ -1.72
NUCKS1-202ENST00000464938 ZPR1O75312 459 aa4.29□□□□□ -1.72
NUCKS1-202ENST00000464938 FCHSD2O94868 740 aa4.29□□□□□ -1.72
NUCKS1-202ENST00000464938 HIC1Q14526 733 aa4.29□□□□□ -1.72
NUCKS1-202ENST00000464938 NBPF26B4DH59 902 aa4.28□□□□□ -1.72
NUCKS1-202ENST00000464938 IRF6O14896 467 aa4.28□□□□□ -1.72
NUCKS1-202ENST00000464938 TRIM66O15016 1216 aa4.28□□□□□ -1.72
NUCKS1-202ENST00000464938 MAP3K7O43318 606 aa4.28□□□□□ -1.72
NUCKS1-202ENST00000464938 GDF9O60383 454 aa4.28□□□□□ -1.72
NUCKS1-202ENST00000464938 MAP2K5Q13163 448 aa4.28□□□□□ -1.72
NUCKS1-202ENST00000464938 SPRYD7Q5W111 196 aa4.28□□□□□ -1.72
NUCKS1-202ENST00000464938 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
NUCKS1-202ENST00000464938 FECHP22830 423 aa4.27□□□□□ -1.73
NUCKS1-202ENST00000464938 GGCXP38435 758 aa4.27□□□□□ -1.73
NUCKS1-202ENST00000464938 SLC19A1P41440 591 aa4.27□□□□□ -1.73
NUCKS1-202ENST00000464938 PKDCCQ504Y2 493 aa4.27□□□□□ -1.73
NUCKS1-202ENST00000464938 ZNF598Q86UK7 904 aaKnown RBP4.27□□□□□ -1.73
NUCKS1-202ENST00000464938 TTC13Q8NBP0 860 aa4.27□□□□□ -1.73
NUCKS1-202ENST00000464938 CERKQ8TCT0 537 aa4.27□□□□□ -1.73
NUCKS1-202ENST00000464938 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
NUCKS1-202ENST00000464938 CDHR5Q9HBB8 845 aa4.27□□□□□ -1.73
NUCKS1-202ENST00000464938 RBM27Q9P2N5 1060 aaKnown RBP4.27□□□□□ -1.73
NUCKS1-202ENST00000464938 PNMA3Q9UL41 463 aa4.27□□□□□ -1.73
NUCKS1-202ENST00000464938 COPS2P61201 443 aa4.26□□□□□ -1.73
NUCKS1-202ENST00000464938 LCE2CQ5TA81 110 aa4.26□□□□□ -1.73
NUCKS1-202ENST00000464938 KRI1Q8N9T8 703 aaKnown RBP4.26□□□□□ -1.73
NUCKS1-202ENST00000464938 AAASQ9NRG9 546 aa4.26□□□□□ -1.73
NUCKS1-202ENST00000464938 ST8SIA5O15466 376 aa4.25□□□□□ -1.73
NUCKS1-202ENST00000464938 AMHR2Q16671 573 aa4.25□□□□□ -1.73
NUCKS1-202ENST00000464938 TMEM132AQ24JP5 1023 aa4.25□□□□□ -1.73
NUCKS1-202ENST00000464938 LIAT1Q6ZQX7 453 aa4.25□□□□□ -1.73
NUCKS1-202ENST00000464938 NUDT18Q6ZVK8 323 aa4.25□□□□□ -1.73
NUCKS1-202ENST00000464938 CRIPAKQ8N1N5 446 aa4.25□□□□□ -1.73
NUCKS1-202ENST00000464938 ANKLE1Q8NAG6 615 aa4.25□□□□□ -1.73
NUCKS1-202ENST00000464938 CCDC102AQ96A19 550 aa4.25□□□□□ -1.73
NUCKS1-202ENST00000464938 WIPF1O43516 503 aa4.24□□□□□ -1.73
NUCKS1-202ENST00000464938 PDE4DQ08499 809 aa4.24□□□□□ -1.73
NUCKS1-202ENST00000464938 NFX1Q12986 1120 aaKnown RBP4.24□□□□□ -1.73
NUCKS1-202ENST00000464938 SWT1Q5T5J6 900 aaKnown RBP4.24□□□□□ -1.73
NUCKS1-202ENST00000464938 FAM187AA6NFU0 413 aa4.23□□□□□ -1.73
NUCKS1-202ENST00000464938 TLL1O43897 1013 aa4.23□□□□□ -1.73
NUCKS1-202ENST00000464938 RNF40O75150 1001 aa4.23□□□□□ -1.73
NUCKS1-202ENST00000464938 NEUROD2Q15784 382 aa4.23□□□□□ -1.73
NUCKS1-202ENST00000464938 PLA2G2CQ5R387 149 aa4.23□□□□□ -1.73
NUCKS1-202ENST00000464938 ZNF697Q5TEC3 545 aa4.23□□□□□ -1.73
NUCKS1-202ENST00000464938 NECTIN2Q92692 538 aa4.23□□□□□ -1.73
NUCKS1-202ENST00000464938 STK17AQ9UEE5 414 aa4.23□□□□□ -1.73
NUCKS1-202ENST00000464938 DACH1Q9UI36 760 aa4.23□□□□□ -1.73
NUCKS1-202ENST00000464938 AVPP01185 164 aa4.22□□□□□ -1.73
NUCKS1-202ENST00000464938 BLOC1S3Q6QNY0 202 aa4.22□□□□□ -1.73
NUCKS1-202ENST00000464938 SLF2Q8IX21 1173 aa4.22□□□□□ -1.73
NUCKS1-202ENST00000464938 PHOX2BQ99453 314 aa4.22□□□□□ -1.73
NUCKS1-202ENST00000464938 EYA1Q99502 592 aa4.22□□□□□ -1.73
NUCKS1-202ENST00000464938 PKD2L1Q9P0L9 805 aa4.22□□□□□ -1.73
NUCKS1-202ENST00000464938 TNFRSF10AO00220 468 aa4.21□□□□□ -1.74
NUCKS1-202ENST00000464938 PPEF1O14829 653 aaPredicted RBP4.21□□□□□ -1.74
NUCKS1-202ENST00000464938 KDM4CQ9H3R0 1056 aa4.21□□□□□ -1.74
NUCKS1-202ENST00000464938 GPBP1L1Q9HC44 474 aaPredicted RBP4.21□□□□□ -1.74
NUCKS1-202ENST00000464938 ADGRG1Q9Y653 693 aa4.21□□□□□ -1.74
NUCKS1-202ENST00000464938 WFS1O76024 890 aa4.2□□□□□ -1.74
NUCKS1-202ENST00000464938 S1PR4O95977 384 aa4.2□□□□□ -1.74
NUCKS1-202ENST00000464938 OATP04181 439 aa4.2□□□□□ -1.74
NUCKS1-202ENST00000464938 PADI6Q6TGC4 694 aa4.2□□□□□ -1.74
NUCKS1-202ENST00000464938 PARP9Q8IXQ6 854 aa4.2□□□□□ -1.74
NUCKS1-202ENST00000464938 PXYLP1Q8TE99 480 aa4.2□□□□□ -1.74
NUCKS1-202ENST00000464938 REPIN1Q9BWE0 567 aaKnown RBP4.2□□□□□ -1.74
NUCKS1-202ENST00000464938 PCDHB3Q9Y5E6 796 aa4.2□□□□□ -1.74
NUCKS1-202ENST00000464938 HDGFP51858 240 aaKnown RBP4.19□□□□□ -1.74
NUCKS1-202ENST00000464938 METTL3Q86U44 580 aaKnown RBP4.19□□□□□ -1.74
NUCKS1-202ENST00000464938 TOR4AQ9NXH8 423 aa4.19□□□□□ -1.74
NUCKS1-202ENST00000464938 PLEKHG3A1L390 1219 aa4.18□□□□□ -1.74
NUCKS1-202ENST00000464938 SMCPP49901 116 aaPredicted RBP4.18□□□□□ -1.74
NUCKS1-202ENST00000464938 PRR14Q9BWN1 585 aa4.18□□□□□ -1.74
NUCKS1-202ENST00000464938 FAM117AQ9C073 453 aa4.18□□□□□ -1.74
NUCKS1-202ENST00000464938 GMPR2Q9P2T1 348 aaKnown RBP4.18□□□□□ -1.74
NUCKS1-202ENST00000464938 FAM161AQ3B820 660 aa4.17□□□□□ -1.74
NUCKS1-202ENST00000464938 DAXXQ9UER7 740 aaPredicted RBP4.17□□□□□ -1.74
NUCKS1-202ENST00000464938 ACTN4O43707 911 aaKnown RBP4.16□□□□□ -1.74
NUCKS1-202ENST00000464938 ADH1BP00325 375 aa4.16□□□□□ -1.74
NUCKS1-202ENST00000464938 MS4A1P11836 297 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms