RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 GCC2Q8IWJ2 1684 aa22.83■■□□□ 1.24
MCF2L-220ENST00000464800 SLC52A1Q9NWF4 448 aa22.81■■□□□ 1.24
MCF2L-220ENST00000464800 PHLPP1O60346 1717 aa22.79■■□□□ 1.24
MCF2L-220ENST00000464800 MSH6P52701 1360 aa22.79■■□□□ 1.24
MCF2L-220ENST00000464800 RBM33Q96EV2 1170 aaKnown RBP22.79■■□□□ 1.24
MCF2L-220ENST00000464800 CHD2O14647 1828 aaKnown RBP22.79■■□□□ 1.24
MCF2L-220ENST00000464800 BCANQ96GW7 911 aa22.78■■□□□ 1.24
MCF2L-220ENST00000464800 ZFYVE9O95405 1425 aa22.77■■□□□ 1.24
MCF2L-220ENST00000464800 ANKRD50Q9ULJ7 1429 aa22.76■■□□□ 1.23
MCF2L-220ENST00000464800 TMEM131LA2VDJ0 1609 aa22.76■■□□□ 1.23
MCF2L-220ENST00000464800 PLEKHG1Q9ULL1 1385 aa22.76■■□□□ 1.23
MCF2L-220ENST00000464800 UNC13BO14795 1591 aa22.73■■□□□ 1.23
MCF2L-220ENST00000464800 RIMS2Q9UQ26 1411 aa22.73■■□□□ 1.23
MCF2L-220ENST00000464800 PPP1R15AO75807 674 aaPredicted RBP22.72■■□□□ 1.23
MCF2L-220ENST00000464800 FAM50AQ14320 339 aaKnown RBP22.72■■□□□ 1.23
MCF2L-220ENST00000464800 POTEAQ6S8J7 498 aa22.72■■□□□ 1.23
MCF2L-220ENST00000464800 E9PCH4 1651 aa22.69■■□□□ 1.22
MCF2L-220ENST00000464800 COL16A1Q07092 1604 aaPredicted RBP22.69■■□□□ 1.22
MCF2L-220ENST00000464800 HDGFP51858 240 aaKnown RBP22.69■■□□□ 1.22
MCF2L-220ENST00000464800 SLAIN2Q9P270 581 aa22.69■■□□□ 1.22
MCF2L-220ENST00000464800 SETD1AO15047 1707 aaKnown RBP22.68■■□□□ 1.22
MCF2L-220ENST00000464800 DIP2AQ14689 1571 aa22.68■■□□□ 1.22
MCF2L-220ENST00000464800 JCADQ9P266 1359 aa22.68■■□□□ 1.22
MCF2L-220ENST00000464800 NCOA3Q9Y6Q9 1424 aa22.65■■□□□ 1.22
MCF2L-220ENST00000464800 IQGAP3Q86VI3 1631 aa22.64■■□□□ 1.22
MCF2L-220ENST00000464800 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.64■■□□□ 1.21
MCF2L-220ENST00000464800 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.63■■□□□ 1.21
MCF2L-220ENST00000464800 TBX22Q9Y458 520 aa22.63■■□□□ 1.21
MCF2L-220ENST00000464800 CHGAP10645 457 aaKnown RBP22.62■■□□□ 1.21
MCF2L-220ENST00000464800 ADAMTS13Q76LX8 1427 aa22.62■■□□□ 1.21
MCF2L-220ENST00000464800 C14orf37Q86TY3 774 aa22.61■■□□□ 1.21
MCF2L-220ENST00000464800 AHDC1Q5TGY3 1603 aaPredicted RBP22.6■■□□□ 1.21
MCF2L-220ENST00000464800 SHPRHQ149N8 1683 aa22.6■■□□□ 1.21
MCF2L-220ENST00000464800 TRPM2O94759 1503 aa22.6■■□□□ 1.21
MCF2L-220ENST00000464800 PIK3R4Q99570 1358 aa22.59■■□□□ 1.21
MCF2L-220ENST00000464800 LRP6O75581 1613 aa22.58■■□□□ 1.21
MCF2L-220ENST00000464800 SPATA31A6Q5VVP1 1343 aa22.57■■□□□ 1.2
MCF2L-220ENST00000464800 ROCK1Q13464 1354 aa22.56■■□□□ 1.2
MCF2L-220ENST00000464800 NUTM2DQ5VT03 806 aaPredicted RBP22.56■■□□□ 1.2
MCF2L-220ENST00000464800 CADPS2Q86UW7 1296 aa22.56■■□□□ 1.2
MCF2L-220ENST00000464800 ATF3P18847 181 aa22.54■■□□□ 1.2
MCF2L-220ENST00000464800 C19orf44Q9H6X5 657 aa22.54■■□□□ 1.2
MCF2L-220ENST00000464800 MEX3CQ5U5Q3 659 aaKnown RBP22.53■■□□□ 1.2
MCF2L-220ENST00000464800 XRN1Q8IZH2 1706 aaKnown RBP22.52■■□□□ 1.2
MCF2L-220ENST00000464800 SPHKAPQ2M3C7 1700 aa22.51■■□□□ 1.19
MCF2L-220ENST00000464800 NRXN3Q9Y4C0 1643 aa22.5■■□□□ 1.19
MCF2L-220ENST00000464800 DCCP43146 1447 aa22.49■■□□□ 1.19
MCF2L-220ENST00000464800 PTPRUQ92729 1446 aa22.49■■□□□ 1.19
MCF2L-220ENST00000464800 ZNF772Q68DY9 489 aaPredicted RBP22.49■■□□□ 1.19
MCF2L-220ENST00000464800 SETBP1Q9Y6X0 1596 aa22.49■■□□□ 1.19
MCF2L-220ENST00000464800 NUP155O75694 1391 aa22.49■■□□□ 1.19
MCF2L-220ENST00000464800 AMOTL2Q9Y2J4 779 aa22.48■■□□□ 1.19
MCF2L-220ENST00000464800 ASXL1Q8IXJ9 1541 aa22.47■■□□□ 1.19
MCF2L-220ENST00000464800 NHSL1Q5SYE7 1610 aa22.46■■□□□ 1.19
MCF2L-220ENST00000464800 BRINP3Q76B58 766 aa22.45■■□□□ 1.18
MCF2L-220ENST00000464800 TRIM52Q96A61 297 aa22.42■■□□□ 1.18
MCF2L-220ENST00000464800 MST1RQ04912 1400 aa22.41■■□□□ 1.18
MCF2L-220ENST00000464800 NALCNQ8IZF0 1738 aa22.4■■□□□ 1.18
MCF2L-220ENST00000464800 SETD5Q9C0A6 1442 aa22.4■■□□□ 1.18
MCF2L-220ENST00000464800 NUTM2BA6NNL0 878 aaPredicted RBP22.39■■□□□ 1.17
MCF2L-220ENST00000464800 NUTM2EB1AL46 878 aaPredicted RBP22.39■■□□□ 1.17
MCF2L-220ENST00000464800 ITGAEP38570 1179 aa22.39■■□□□ 1.17
MCF2L-220ENST00000464800 NUTM2AQ8IVF1 878 aaPredicted RBP22.39■■□□□ 1.17
MCF2L-220ENST00000464800 ZNF326Q5BKZ1 582 aaKnown RBP22.38■■□□□ 1.17
MCF2L-220ENST00000464800 CDK12Q9NYV4 1490 aaPredicted RBP22.38■■□□□ 1.17
MCF2L-220ENST00000464800 CLTCL1P53675 1640 aa22.38■■□□□ 1.17
MCF2L-220ENST00000464800 RXRBP28702 533 aa22.37■■□□□ 1.17
MCF2L-220ENST00000464800 UPF1Q92900 1129 aaKnown RBP eCLIP22.37■■□□□ 1.17
MCF2L-220ENST00000464800 ADGRL3Q9HAR2 1447 aa22.37■■□□□ 1.17
MCF2L-220ENST00000464800 METP08581 1390 aa22.37■■□□□ 1.17
MCF2L-220ENST00000464800 NEXMIFQ5QGS0 1516 aa22.36■■□□□ 1.17
MCF2L-220ENST00000464800 KIF1BO60333 1816 aa22.36■■□□□ 1.17
MCF2L-220ENST00000464800 AFF2P51816 1311 aa22.33■■□□□ 1.17
MCF2L-220ENST00000464800 LRRC59Q96AG4 307 aaKnown RBP22.31■■□□□ 1.16
MCF2L-220ENST00000464800 PNPLA6Q8IY17 1366 aa22.29■■□□□ 1.16
MCF2L-220ENST00000464800 LAMC1P11047 1609 aa22.28■■□□□ 1.16
MCF2L-220ENST00000464800 DDX17Q92841 729 aaKnown RBP22.26■■□□□ 1.15
MCF2L-220ENST00000464800 C8orf37Q96NL8 207 aa22.26■■□□□ 1.15
MCF2L-220ENST00000464800 RGS12O14924 1447 aa22.25■■□□□ 1.15
MCF2L-220ENST00000464800 PTCH1Q13635 1447 aa22.25■■□□□ 1.15
MCF2L-220ENST00000464800 C1orf167Q5SNV9 1468 aa22.24■■□□□ 1.15
MCF2L-220ENST00000464800 RBM6P78332 1123 aaKnown RBP22.21■■□□□ 1.15
MCF2L-220ENST00000464800 PPARGC1BQ86YN6 1023 aaKnown RBP22.21■■□□□ 1.15
MCF2L-220ENST00000464800 QTRT2Q9H974 415 aaKnown RBP22.21■■□□□ 1.15
MCF2L-220ENST00000464800 PRAG1Q86YV5 1406 aa22.19■■□□□ 1.14
MCF2L-220ENST00000464800 PPLO60437 1756 aa22.19■■□□□ 1.14
MCF2L-220ENST00000464800 NAIPQ13075 1403 aa22.18■■□□□ 1.14
MCF2L-220ENST00000464800 ROBO2Q9HCK4 1378 aa22.18■■□□□ 1.14
MCF2L-220ENST00000464800 VGFO15240 615 aaPredicted RBP22.17■■□□□ 1.14
MCF2L-220ENST00000464800 ADAMTS2O95450 1211 aa22.17■■□□□ 1.14
MCF2L-220ENST00000464800 NGLY1Q96IV0 654 aa22.17■■□□□ 1.14
MCF2L-220ENST00000464800 COL22A1Q8NFW1 1626 aaPredicted RBP22.17■■□□□ 1.14
MCF2L-220ENST00000464800 RRBP1Q9P2E9 1410 aaKnown RBP22.15■■□□□ 1.14
MCF2L-220ENST00000464800 SOS2Q07890 1332 aaPredicted RBP22.15■■□□□ 1.14
MCF2L-220ENST00000464800 HFM1A2PYH4 1435 aa22.14■■□□□ 1.14
MCF2L-220ENST00000464800 ORAI2Q96SN7 254 aa22.13■■□□□ 1.13
MCF2L-220ENST00000464800 CDC42BPGQ6DT37 1551 aa22.12■■□□□ 1.13
MCF2L-220ENST00000464800 MARF1Q9Y4F3 1742 aaKnown RBP22.11■■□□□ 1.13
MCF2L-220ENST00000464800 RPGRIP1LQ68CZ1 1315 aa22.11■■□□□ 1.13
MCF2L-220ENST00000464800 ATAD2Q6PL18 1390 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms