RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 SLC52A1Q9NWF4 448 aa20.79■□□□□ 0.92
MRPL55-224ENST00000464148 NWD1Q149M9 1564 aa20.79■□□□□ 0.92
MRPL55-224ENST00000464148 SLAIN2Q9P270 581 aa20.78■□□□□ 0.92
MRPL55-224ENST00000464148 PHLPP1O60346 1717 aa20.78■□□□□ 0.92
MRPL55-224ENST00000464148 PPP1R15AO75807 674 aaPredicted RBP20.75■□□□□ 0.91
MRPL55-224ENST00000464148 JCADQ9P266 1359 aa20.74■□□□□ 0.91
MRPL55-224ENST00000464148 HDGFP51858 240 aaKnown RBP20.73■□□□□ 0.91
MRPL55-224ENST00000464148 PLEKHG1Q9ULL1 1385 aa20.72■□□□□ 0.91
MRPL55-224ENST00000464148 RPRD2Q5VT52 1461 aaKnown RBP20.71■□□□□ 0.91
MRPL55-224ENST00000464148 SETD1AO15047 1707 aaKnown RBP20.71■□□□□ 0.91
MRPL55-224ENST00000464148 C14orf37Q86TY3 774 aa20.71■□□□□ 0.91
MRPL55-224ENST00000464148 CHD2O14647 1828 aaKnown RBP20.71■□□□□ 0.91
MRPL55-224ENST00000464148 MYO5BQ9ULV0 1848 aa20.7■□□□□ 0.9
MRPL55-224ENST00000464148 GCC2Q8IWJ2 1684 aa20.7■□□□□ 0.9
MRPL55-224ENST00000464148 ZFYVE9O95405 1425 aa20.7■□□□□ 0.9
MRPL55-224ENST00000464148 RIMS2Q9UQ26 1411 aa20.7■□□□□ 0.9
MRPL55-224ENST00000464148 ADGRL2O95490 1459 aa20.69■□□□□ 0.9
MRPL55-224ENST00000464148 FAM50AQ14320 339 aaKnown RBP20.68■□□□□ 0.9
MRPL55-224ENST00000464148 CHGAP10645 457 aaKnown RBP20.67■□□□□ 0.9
MRPL55-224ENST00000464148 MEX3CQ5U5Q3 659 aaKnown RBP20.67■□□□□ 0.9
MRPL55-224ENST00000464148 ANKRD50Q9ULJ7 1429 aa20.67■□□□□ 0.9
MRPL55-224ENST00000464148 TBX22Q9Y458 520 aa20.66■□□□□ 0.9
MRPL55-224ENST00000464148 TMEM131LA2VDJ0 1609 aa20.66■□□□□ 0.9
MRPL55-224ENST00000464148 COL16A1Q07092 1604 aaPredicted RBP20.66■□□□□ 0.9
MRPL55-224ENST00000464148 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.65■□□□□ 0.9
MRPL55-224ENST00000464148 NCOA3Q9Y6Q9 1424 aa20.63■□□□□ 0.89
MRPL55-224ENST00000464148 SPATA31A6Q5VVP1 1343 aa20.63■□□□□ 0.89
MRPL55-224ENST00000464148 ATF3P18847 181 aa20.62■□□□□ 0.89
MRPL55-224ENST00000464148 NUTM2DQ5VT03 806 aaPredicted RBP20.62■□□□□ 0.89
MRPL55-224ENST00000464148 LRP6O75581 1613 aa20.61■□□□□ 0.89
MRPL55-224ENST00000464148 ZNF772Q68DY9 489 aaPredicted RBP20.61■□□□□ 0.89
MRPL55-224ENST00000464148 CADPS2Q86UW7 1296 aa20.61■□□□□ 0.89
MRPL55-224ENST00000464148 C19orf44Q9H6X5 657 aa20.6■□□□□ 0.89
MRPL55-224ENST00000464148 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.6■□□□□ 0.89
MRPL55-224ENST00000464148 TRIM52Q96A61 297 aa20.59■□□□□ 0.89
MRPL55-224ENST00000464148 DIP2AQ14689 1571 aa20.58■□□□□ 0.88
MRPL55-224ENST00000464148 AHDC1Q5TGY3 1603 aaPredicted RBP20.57■□□□□ 0.88
MRPL55-224ENST00000464148 ADAMTS13Q76LX8 1427 aa20.57■□□□□ 0.88
MRPL55-224ENST00000464148 SHPRHQ149N8 1683 aa20.57■□□□□ 0.88
MRPL55-224ENST00000464148 PIK3R4Q99570 1358 aa20.57■□□□□ 0.88
MRPL55-224ENST00000464148 UNC13BO14795 1591 aa20.56■□□□□ 0.88
MRPL55-224ENST00000464148 E9PCH4 1651 aa20.55■□□□□ 0.88
MRPL55-224ENST00000464148 UPF1Q92900 1129 aaKnown RBP eCLIP20.55■□□□□ 0.88
MRPL55-224ENST00000464148 TRPM2O94759 1503 aa20.54■□□□□ 0.88
MRPL55-224ENST00000464148 NUTM2BA6NNL0 878 aaPredicted RBP20.53■□□□□ 0.88
MRPL55-224ENST00000464148 NUTM2EB1AL46 878 aaPredicted RBP20.53■□□□□ 0.88
MRPL55-224ENST00000464148 NUTM2AQ8IVF1 878 aaPredicted RBP20.53■□□□□ 0.88
MRPL55-224ENST00000464148 AMOTL2Q9Y2J4 779 aa20.53■□□□□ 0.88
MRPL55-224ENST00000464148 RXRBP28702 533 aa20.52■□□□□ 0.88
MRPL55-224ENST00000464148 BRINP3Q76B58 766 aa20.52■□□□□ 0.88
MRPL55-224ENST00000464148 IQGAP3Q86VI3 1631 aa20.49■□□□□ 0.87
MRPL55-224ENST00000464148 PTPRUQ92729 1446 aa20.48■□□□□ 0.87
MRPL55-224ENST00000464148 DCCP43146 1447 aa20.46■□□□□ 0.87
MRPL55-224ENST00000464148 ASXL1Q8IXJ9 1541 aa20.46■□□□□ 0.87
MRPL55-224ENST00000464148 AFF2P51816 1311 aa20.46■□□□□ 0.87
MRPL55-224ENST00000464148 NUP155O75694 1391 aa20.46■□□□□ 0.87
MRPL55-224ENST00000464148 ROCK1Q13464 1354 aa20.44■□□□□ 0.86
MRPL55-224ENST00000464148 ZNF326Q5BKZ1 582 aaKnown RBP20.43■□□□□ 0.86
MRPL55-224ENST00000464148 CDK12Q9NYV4 1490 aaPredicted RBP20.43■□□□□ 0.86
MRPL55-224ENST00000464148 XRN1Q8IZH2 1706 aaKnown RBP20.42■□□□□ 0.86
MRPL55-224ENST00000464148 LRRC59Q96AG4 307 aaKnown RBP20.42■□□□□ 0.86
MRPL55-224ENST00000464148 SETD5Q9C0A6 1442 aa20.42■□□□□ 0.86
MRPL55-224ENST00000464148 MST1RQ04912 1400 aa20.41■□□□□ 0.86
MRPL55-224ENST00000464148 NHSL1Q5SYE7 1610 aa20.41■□□□□ 0.86
MRPL55-224ENST00000464148 NRXN3Q9Y4C0 1643 aa20.41■□□□□ 0.86
MRPL55-224ENST00000464148 ITGAEP38570 1179 aa20.4■□□□□ 0.86
MRPL55-224ENST00000464148 C8orf37Q96NL8 207 aa20.4■□□□□ 0.86
MRPL55-224ENST00000464148 SETBP1Q9Y6X0 1596 aa20.4■□□□□ 0.86
MRPL55-224ENST00000464148 METP08581 1390 aa20.37■□□□□ 0.85
MRPL55-224ENST00000464148 SPHKAPQ2M3C7 1700 aa20.37■□□□□ 0.85
MRPL55-224ENST00000464148 DDX17Q92841 729 aaKnown RBP20.37■□□□□ 0.85
MRPL55-224ENST00000464148 QTRT2Q9H974 415 aaKnown RBP20.37■□□□□ 0.85
MRPL55-224ENST00000464148 RBM6P78332 1123 aaKnown RBP20.35■□□□□ 0.85
MRPL55-224ENST00000464148 ADGRL3Q9HAR2 1447 aa20.35■□□□□ 0.85
MRPL55-224ENST00000464148 PNPLA6Q8IY17 1366 aa20.34■□□□□ 0.85
MRPL55-224ENST00000464148 RGS12O14924 1447 aa20.34■□□□□ 0.85
MRPL55-224ENST00000464148 NALCNQ8IZF0 1738 aa20.33■□□□□ 0.84
MRPL55-224ENST00000464148 ADAMTS2O95450 1211 aa20.32■□□□□ 0.84
MRPL55-224ENST00000464148 NGLY1Q96IV0 654 aa20.32■□□□□ 0.84
MRPL55-224ENST00000464148 NEXMIFQ5QGS0 1516 aa20.27■□□□□ 0.84
MRPL55-224ENST00000464148 C1orf167Q5SNV9 1468 aa20.27■□□□□ 0.84
MRPL55-224ENST00000464148 CLTCL1P53675 1640 aa20.27■□□□□ 0.83
MRPL55-224ENST00000464148 USP21Q9UK80 565 aa20.25■□□□□ 0.83
MRPL55-224ENST00000464148 ATAD2Q6PL18 1390 aa20.24■□□□□ 0.83
MRPL55-224ENST00000464148 KIF1BO60333 1816 aa20.24■□□□□ 0.83
MRPL55-224ENST00000464148 ORAI2Q96SN7 254 aa20.23■□□□□ 0.83
MRPL55-224ENST00000464148 SRCAPQ6ZRS2 3230 aa20.22■□□□□ 0.83
MRPL55-224ENST00000464148 LAMC1P11047 1609 aa20.22■□□□□ 0.83
MRPL55-224ENST00000464148 SOS2Q07890 1332 aaPredicted RBP20.22■□□□□ 0.83
MRPL55-224ENST00000464148 PTCH1Q13635 1447 aa20.21■□□□□ 0.83
MRPL55-224ENST00000464148 VGFO15240 615 aaPredicted RBP20.21■□□□□ 0.83
MRPL55-224ENST00000464148 PPARGC1BQ86YN6 1023 aaKnown RBP20.21■□□□□ 0.83
MRPL55-224ENST00000464148 TRPC5Q9UL62 973 aaPredicted RBP20.21■□□□□ 0.83
MRPL55-224ENST00000464148 ROBO2Q9HCK4 1378 aa20.2■□□□□ 0.82
MRPL55-224ENST00000464148 FOXD1Q16676 465 aa20.18■□□□□ 0.82
MRPL55-224ENST00000464148 FNBP4Q8N3X1 1017 aaPredicted RBP20.17■□□□□ 0.82
MRPL55-224ENST00000464148 COL22A1Q8NFW1 1626 aaPredicted RBP20.14■□□□□ 0.81
MRPL55-224ENST00000464148 HFM1A2PYH4 1435 aa20.14■□□□□ 0.81
MRPL55-224ENST00000464148 ATRNO75882 1429 aa20.14■□□□□ 0.81
MRPL55-224ENST00000464148 ESCO1Q5FWF5 840 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms