RNA–Protein interactions for RNA: ENST00000463003.1

CHAMP1-202, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

TSL 3

Gene CHAMP1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-202ENST00000463003 GFRA3O60609 400 aa10.37□□□□□ -0.75
CHAMP1-202ENST00000463003 ZPR1O75312 459 aa10.37□□□□□ -0.75
CHAMP1-202ENST00000463003 FCHSD2O94868 740 aa10.37□□□□□ -0.75
CHAMP1-202ENST00000463003 TMUB1Q9BVT8 246 aa10.37□□□□□ -0.75
CHAMP1-202ENST00000463003 TMEM134Q9H6X4 195 aa10.37□□□□□ -0.75
CHAMP1-202ENST00000463003 PCDHB3Q9Y5E6 796 aa10.37□□□□□ -0.75
CHAMP1-202ENST00000463003 NKX2-3Q8TAU0 364 aa10.36□□□□□ -0.75
CHAMP1-202ENST00000463003 RCCD1A6NED2 376 aa10.34□□□□□ -0.75
CHAMP1-202ENST00000463003 KMT5BQ4FZB7 885 aa10.34□□□□□ -0.75
CHAMP1-202ENST00000463003 NRG2O14511 850 aaPredicted RBP10.33□□□□□ -0.76
CHAMP1-202ENST00000463003 SEMA3EO15041 775 aa10.33□□□□□ -0.76
CHAMP1-202ENST00000463003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.32□□□□□ -0.76
CHAMP1-202ENST00000463003 BLOC1S3Q6QNY0 202 aa10.31□□□□□ -0.76
CHAMP1-202ENST00000463003 ACTN4O43707 911 aaKnown RBP10.3□□□□□ -0.76
CHAMP1-202ENST00000463003 SLC24A1O60721 1099 aa10.3□□□□□ -0.76
CHAMP1-202ENST00000463003 OATP04181 439 aa10.3□□□□□ -0.76
CHAMP1-202ENST00000463003 CFHP08603 1231 aa10.29□□□□□ -0.76
CHAMP1-202ENST00000463003 FAM161AQ3B820 660 aa10.29□□□□□ -0.76
CHAMP1-202ENST00000463003 SMYD5Q6GMV2 418 aa10.29□□□□□ -0.76
CHAMP1-202ENST00000463003 TRAF7Q6Q0C0 670 aa10.29□□□□□ -0.76
CHAMP1-202ENST00000463003 HIC1Q14526 733 aa10.28□□□□□ -0.76
CHAMP1-202ENST00000463003 PDZRN3Q9UPQ7 1066 aa10.27□□□□□ -0.77
CHAMP1-202ENST00000463003 RSPH4AQ5TD94 716 aa10.26□□□□□ -0.77
CHAMP1-202ENST00000463003 PXYLP1Q8TE99 480 aa10.26□□□□□ -0.77
CHAMP1-202ENST00000463003 TESPA1A2RU30 521 aaPredicted RBP10.25□□□□□ -0.77
CHAMP1-202ENST00000463003 RNF223E7ERA6 249 aa10.24□□□□□ -0.77
CHAMP1-202ENST00000463003 NR1I2O75469 434 aa10.24□□□□□ -0.77
CHAMP1-202ENST00000463003 TLL1O43897 1013 aa10.23□□□□□ -0.77
CHAMP1-202ENST00000463003 SLC10A3P09131 477 aa10.23□□□□□ -0.77
CHAMP1-202ENST00000463003 LCE2BO14633 110 aa10.22□□□□□ -0.77
CHAMP1-202ENST00000463003 SLC19A1P41440 591 aa10.22□□□□□ -0.77
CHAMP1-202ENST00000463003 METTL3Q86U44 580 aaKnown RBP10.22□□□□□ -0.77
CHAMP1-202ENST00000463003 ANKLE1Q8NAG6 615 aa10.22□□□□□ -0.77
CHAMP1-202ENST00000463003 GNPATO15228 680 aa10.21□□□□□ -0.77
CHAMP1-202ENST00000463003 ADH1BP00325 375 aa10.21□□□□□ -0.77
CHAMP1-202ENST00000463003 RBM26Q5T8P6 1007 aaKnown RBP10.21□□□□□ -0.77
CHAMP1-202ENST00000463003 S1PR4O95977 384 aa10.19□□□□□ -0.78
CHAMP1-202ENST00000463003 SPRYD7Q5W111 196 aa10.16□□□□□ -0.78
CHAMP1-202ENST00000463003 ZNF598Q86UK7 904 aaKnown RBP10.16□□□□□ -0.78
CHAMP1-202ENST00000463003 SLC6A16Q9GZN6 736 aa10.16□□□□□ -0.78
CHAMP1-202ENST00000463003 DAXXQ9UER7 740 aaPredicted RBP10.16□□□□□ -0.78
CHAMP1-202ENST00000463003 SCUBE3Q8IX30 993 aa10.15□□□□□ -0.78
CHAMP1-202ENST00000463003 PPEF1O14829 653 aaPredicted RBP10.14□□□□□ -0.79
CHAMP1-202ENST00000463003 GPR37O15354 613 aa10.14□□□□□ -0.79
CHAMP1-202ENST00000463003 EMID1Q96A84 441 aaPredicted RBP10.14□□□□□ -0.79
CHAMP1-202ENST00000463003 FECHP22830 423 aa10.13□□□□□ -0.79
CHAMP1-202ENST00000463003 PRR20EP86478 221 aa10.13□□□□□ -0.79
CHAMP1-202ENST00000463003 PRR20CP86479 221 aa10.13□□□□□ -0.79
CHAMP1-202ENST00000463003 PRR20DP86480 221 aa10.13□□□□□ -0.79
CHAMP1-202ENST00000463003 PRR20BP86481 221 aa10.13□□□□□ -0.79
CHAMP1-202ENST00000463003 PRR20AP86496 221 aa10.13□□□□□ -0.79
CHAMP1-202ENST00000463003 TRIM67Q6ZTA4 783 aa10.13□□□□□ -0.79
CHAMP1-202ENST00000463003 RDH13Q8NBN7 331 aa10.13□□□□□ -0.79
CHAMP1-202ENST00000463003 PUS10Q3MIT2 529 aaKnown RBP10.12□□□□□ -0.79
CHAMP1-202ENST00000463003 SULF1Q8IWU6 871 aa10.12□□□□□ -0.79
CHAMP1-202ENST00000463003 SPSB2Q99619 263 aa10.12□□□□□ -0.79
CHAMP1-202ENST00000463003 ZNF697Q5TEC3 545 aa10.11□□□□□ -0.79
CHAMP1-202ENST00000463003 LIAT1Q6ZQX7 453 aa10.11□□□□□ -0.79
CHAMP1-202ENST00000463003 DDX11L8A8MPP1 907 aa10.1□□□□□ -0.79
CHAMP1-202ENST00000463003 PKDCCQ504Y2 493 aa10.1□□□□□ -0.79
CHAMP1-202ENST00000463003 DGAT1O75907 488 aa10.09□□□□□ -0.79
CHAMP1-202ENST00000463003 GPIHBP1Q8IV16 184 aa10.09□□□□□ -0.79
CHAMP1-202ENST00000463003 ATP6V1AP38606 617 aa10.08□□□□□ -0.8
CHAMP1-202ENST00000463003 MORN1Q5T089 497 aa10.08□□□□□ -0.8
CHAMP1-202ENST00000463003 ZNF787Q6DD87 383 aa10.08□□□□□ -0.8
CHAMP1-202ENST00000463003 FUT2Q10981 343 aa10.07□□□□□ -0.8
CHAMP1-202ENST00000463003 GCGRP47871 477 aa10.06□□□□□ -0.8
CHAMP1-202ENST00000463003 GDF9O60383 454 aa10.05□□□□□ -0.8
CHAMP1-202ENST00000463003 FMNL1O95466 1100 aaPredicted RBP10.05□□□□□ -0.8
CHAMP1-202ENST00000463003 PLA2G2CQ5R387 149 aa10.05□□□□□ -0.8
CHAMP1-202ENST00000463003 LMOD2Q6P5Q4 547 aa10.04□□□□□ -0.8
CHAMP1-202ENST00000463003 NLRP7Q8WX94 980 aa10.04□□□□□ -0.8
CHAMP1-202ENST00000463003 THAP11Q96EK4 314 aa10.04□□□□□ -0.8
CHAMP1-202ENST00000463003 SALL2Q9Y467 1007 aaPredicted RBP10.04□□□□□ -0.8
CHAMP1-202ENST00000463003 RPIAP49247 311 aa10.03□□□□□ -0.8
CHAMP1-202ENST00000463003 GRIPAP1Q4V328 841 aa10.03□□□□□ -0.8
CHAMP1-202ENST00000463003 PHOX2BQ99453 314 aa10.03□□□□□ -0.8
CHAMP1-202ENST00000463003 FAM187AA6NFU0 413 aa10.02□□□□□ -0.81
CHAMP1-202ENST00000463003 TNFRSF10AO00220 468 aa10.02□□□□□ -0.81
CHAMP1-202ENST00000463003 TULP1O00294 542 aaPredicted RBP10.02□□□□□ -0.81
CHAMP1-202ENST00000463003 MYT1Q01538 1121 aa10.02□□□□□ -0.81
CHAMP1-202ENST00000463003 SLC27A5Q9Y2P5 690 aa10.02□□□□□ -0.81
CHAMP1-202ENST00000463003 FCF1Q9Y324 198 aaKnown RBP10□□□□□ -0.81
CHAMP1-202ENST00000463003 CD2BP2O95400 341 aaKnown RBP9.99□□□□□ -0.81
CHAMP1-202ENST00000463003 BRICD5Q6PL45 260 aa9.99□□□□□ -0.81
CHAMP1-202ENST00000463003 MAP2K5Q13163 448 aa9.98□□□□□ -0.81
CHAMP1-202ENST00000463003 MSS51Q4VC12 460 aa9.98□□□□□ -0.81
CHAMP1-202ENST00000463003 FAM160A2Q8N612 972 aaPredicted RBP9.98□□□□□ -0.81
CHAMP1-202ENST00000463003 Q3C1V9 767 aa9.97□□□□□ -0.81
CHAMP1-202ENST00000463003 PKD2L1Q9P0L9 805 aa9.97□□□□□ -0.81
CHAMP1-202ENST00000463003 FOXC1Q12948 553 aa9.96□□□□□ -0.82
CHAMP1-202ENST00000463003 ZBTB24O43167 697 aaPredicted RBP9.94□□□□□ -0.82
CHAMP1-202ENST00000463003 CD46P15529 392 aa9.94□□□□□ -0.82
CHAMP1-202ENST00000463003 PRDM9Q9NQV7 894 aa9.94□□□□□ -0.82
CHAMP1-202ENST00000463003 IRF6O14896 467 aa9.93□□□□□ -0.82
CHAMP1-202ENST00000463003 RNF19BQ6ZMZ0 732 aa9.93□□□□□ -0.82
CHAMP1-202ENST00000463003 MINK1Q8N4C8 1332 aaPredicted RBP9.92□□□□□ -0.82
CHAMP1-202ENST00000463003 ZNF775Q96BV0 537 aaPredicted RBP9.92□□□□□ -0.82
CHAMP1-202ENST00000463003 KDM4AO75164 1064 aa9.91□□□□□ -0.82
CHAMP1-202ENST00000463003 USP46P62068 366 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms