RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 E9PCH4 1651 aa27.38■■□□□ 1.97
SSB-206ENST00000461708 NKTRP30414 1462 aaKnown RBP27.37■■□□□ 1.97
SSB-206ENST00000461708 MYO5BQ9ULV0 1848 aa27.37■■□□□ 1.97
SSB-206ENST00000461708 PLEKHG1Q9ULL1 1385 aa27.36■■□□□ 1.97
SSB-206ENST00000461708 NWD1Q149M9 1564 aa27.36■■□□□ 1.97
SSB-206ENST00000461708 TMEM94Q12767 1356 aa27.35■■□□□ 1.97
SSB-206ENST00000461708 RIMS2Q9UQ26 1411 aa27.34■■□□□ 1.97
SSB-206ENST00000461708 NUP155O75694 1391 aa27.33■■□□□ 1.97
SSB-206ENST00000461708 FAM135BQ49AJ0 1406 aa27.33■■□□□ 1.96
SSB-206ENST00000461708 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.32■■□□□ 1.96
SSB-206ENST00000461708 PROSER2Q86WR7 435 aaPredicted RBP27.31■■□□□ 1.96
SSB-206ENST00000461708 PPP1R15AO75807 674 aaPredicted RBP27.29■■□□□ 1.96
SSB-206ENST00000461708 BCANQ96GW7 911 aa27.29■■□□□ 1.96
SSB-206ENST00000461708 ITGAEP38570 1179 aa27.28■■□□□ 1.96
SSB-206ENST00000461708 TBX22Q9Y458 520 aa27.28■■□□□ 1.96
SSB-206ENST00000461708 CHD2O14647 1828 aaKnown RBP27.27■■□□□ 1.96
SSB-206ENST00000461708 PPARGC1BQ86YN6 1023 aaKnown RBP27.25■■□□□ 1.95
SSB-206ENST00000461708 RRBP1Q9P2E9 1410 aaKnown RBP27.24■■□□□ 1.95
SSB-206ENST00000461708 CHGAP10645 457 aaKnown RBP27.23■■□□□ 1.95
SSB-206ENST00000461708 DIP2AQ14689 1571 aa27.22■■□□□ 1.95
SSB-206ENST00000461708 PIK3R4Q99570 1358 aa27.22■■□□□ 1.95
SSB-206ENST00000461708 NCOA3Q9Y6Q9 1424 aa27.21■■□□□ 1.95
SSB-206ENST00000461708 MSH6P52701 1360 aa27.21■■□□□ 1.95
SSB-206ENST00000461708 ADAMTS13Q76LX8 1427 aa27.2■■□□□ 1.94
SSB-206ENST00000461708 PHF23Q9BUL5 403 aaPredicted RBP27.18■■□□□ 1.94
SSB-206ENST00000461708 SENP3Q9H4L4 574 aaPredicted RBP27.18■■□□□ 1.94
SSB-206ENST00000461708 SPHKAPQ2M3C7 1700 aa27.17■■□□□ 1.94
SSB-206ENST00000461708 RBM33Q96EV2 1170 aaKnown RBP27.17■■□□□ 1.94
SSB-206ENST00000461708 ROBO1Q9Y6N7 1651 aa27.17■■□□□ 1.94
SSB-206ENST00000461708 SLAIN2Q9P270 581 aa27.14■■□□□ 1.94
SSB-206ENST00000461708 NAIPQ13075 1403 aa27.12■■□□□ 1.93
SSB-206ENST00000461708 NUTM2DQ5VT03 806 aaPredicted RBP27.11■■□□□ 1.93
SSB-206ENST00000461708 TRPM2O94759 1503 aa27.11■■□□□ 1.93
SSB-206ENST00000461708 SETBP1Q9Y6X0 1596 aa27.07■■□□□ 1.92
SSB-206ENST00000461708 C19orf44Q9H6X5 657 aa27.05■■□□□ 1.92
SSB-206ENST00000461708 HFM1A2PYH4 1435 aa27.05■■□□□ 1.92
SSB-206ENST00000461708 NRXN3Q9Y4C0 1643 aa27.04■■□□□ 1.92
SSB-206ENST00000461708 CADPS2Q86UW7 1296 aa27.03■■□□□ 1.92
SSB-206ENST00000461708 AMOTL2Q9Y2J4 779 aa27.03■■□□□ 1.92
SSB-206ENST00000461708 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.02■■□□□ 1.92
SSB-206ENST00000461708 PTPRUQ92729 1446 aa27.02■■□□□ 1.92
SSB-206ENST00000461708 C14orf37Q86TY3 774 aa27.02■■□□□ 1.92
SSB-206ENST00000461708 CLTCL1P53675 1640 aa27.01■■□□□ 1.92
SSB-206ENST00000461708 ZNF326Q5BKZ1 582 aaKnown RBP27.01■■□□□ 1.91
SSB-206ENST00000461708 RGS17Q9UGC6 210 aaPredicted RBP27.01■■□□□ 1.91
SSB-206ENST00000461708 PHLPP1O60346 1717 aa27■■□□□ 1.91
SSB-206ENST00000461708 XRN1Q8IZH2 1706 aaKnown RBP26.99■■□□□ 1.91
SSB-206ENST00000461708 KIF1BO60333 1816 aa26.98■■□□□ 1.91
SSB-206ENST00000461708 ATF3P18847 181 aa26.98■■□□□ 1.91
SSB-206ENST00000461708 NEXMIFQ5QGS0 1516 aa26.98■■□□□ 1.91
SSB-206ENST00000461708 DCCP43146 1447 aa26.98■■□□□ 1.91
SSB-206ENST00000461708 JCADQ9P266 1359 aa26.97■■□□□ 1.91
SSB-206ENST00000461708 COL16A1Q07092 1604 aaPredicted RBP26.94■■□□□ 1.9
SSB-206ENST00000461708 METP08581 1390 aa26.93■■□□□ 1.9
SSB-206ENST00000461708 AHDC1Q5TGY3 1603 aaPredicted RBP26.92■■□□□ 1.9
SSB-206ENST00000461708 TRIM52Q96A61 297 aa26.92■■□□□ 1.9
SSB-206ENST00000461708 SLC4A1APQ9BWU0 796 aaKnown RBP26.89■■□□□ 1.9
SSB-206ENST00000461708 RPGRIP1LQ68CZ1 1315 aa26.89■■□□□ 1.89
SSB-206ENST00000461708 VGFO15240 615 aaPredicted RBP26.88■■□□□ 1.89
SSB-206ENST00000461708 SPATA31A6Q5VVP1 1343 aa26.86■■□□□ 1.89
SSB-206ENST00000461708 BRINP3Q76B58 766 aa26.85■■□□□ 1.89
SSB-206ENST00000461708 ADGRL3Q9HAR2 1447 aa26.83■■□□□ 1.89
SSB-206ENST00000461708 POTEAQ6S8J7 498 aa26.83■■□□□ 1.89
SSB-206ENST00000461708 MST1RQ04912 1400 aa26.82■■□□□ 1.88
SSB-206ENST00000461708 SHPRHQ149N8 1683 aa26.82■■□□□ 1.88
SSB-206ENST00000461708 PRAG1Q86YV5 1406 aa26.82■■□□□ 1.88
SSB-206ENST00000461708 SETD1AO15047 1707 aaKnown RBP26.81■■□□□ 1.88
SSB-206ENST00000461708 PTCH1Q13635 1447 aa26.8■■□□□ 1.88
SSB-206ENST00000461708 ASXL1Q8IXJ9 1541 aa26.8■■□□□ 1.88
SSB-206ENST00000461708 PPLO60437 1756 aa26.79■■□□□ 1.88
SSB-206ENST00000461708 NALCNQ8IZF0 1738 aa26.76■■□□□ 1.88
SSB-206ENST00000461708 ACIN1Q9UKV3 1341 aaKnown RBP26.76■■□□□ 1.87
SSB-206ENST00000461708 LRP6O75581 1613 aa26.76■■□□□ 1.87
SSB-206ENST00000461708 NHSL1Q5SYE7 1610 aa26.76■■□□□ 1.87
SSB-206ENST00000461708 SETD5Q9C0A6 1442 aa26.75■■□□□ 1.87
SSB-206ENST00000461708 CCDC144AA2RUR9 1427 aa26.72■■□□□ 1.87
SSB-206ENST00000461708 ROBO2Q9HCK4 1378 aa26.71■■□□□ 1.87
SSB-206ENST00000461708 MPHOSPH9Q99550 1183 aa26.7■■□□□ 1.86
SSB-206ENST00000461708 FOXD1Q16676 465 aa26.69■■□□□ 1.86
SSB-206ENST00000461708 ZNF772Q68DY9 489 aaPredicted RBP26.69■■□□□ 1.86
SSB-206ENST00000461708 SPATA31E1Q6ZUB1 1445 aa26.69■■□□□ 1.86
SSB-206ENST00000461708 LRRC59Q96AG4 307 aaKnown RBP26.69■■□□□ 1.86
SSB-206ENST00000461708 MEX3CQ5U5Q3 659 aaKnown RBP26.68■■□□□ 1.86
SSB-206ENST00000461708 C1orf167Q5SNV9 1468 aa26.68■■□□□ 1.86
SSB-206ENST00000461708 ANKRD30BQ9BXX2 1392 aa26.67■■□□□ 1.86
SSB-206ENST00000461708 LAMC1P11047 1609 aa26.66■■□□□ 1.86
SSB-206ENST00000461708 IFT172Q9UG01 1749 aa26.62■■□□□ 1.85
SSB-206ENST00000461708 ADGRF5Q8IZF2 1346 aa26.61■■□□□ 1.85
SSB-206ENST00000461708 TECPR2O15040 1411 aa26.6■■□□□ 1.85
SSB-206ENST00000461708 PNPLA6Q8IY17 1366 aa26.59■■□□□ 1.85
SSB-206ENST00000461708 NUTM2BA6NNL0 878 aaPredicted RBP26.58■■□□□ 1.85
SSB-206ENST00000461708 NUTM2EB1AL46 878 aaPredicted RBP26.58■■□□□ 1.85
SSB-206ENST00000461708 RGL3Q3MIN7 710 aa26.58■■□□□ 1.85
SSB-206ENST00000461708 NUTM2AQ8IVF1 878 aaPredicted RBP26.58■■□□□ 1.85
SSB-206ENST00000461708 SOS2Q07890 1332 aaPredicted RBP26.58■■□□□ 1.85
SSB-206ENST00000461708 CDC42BPGQ6DT37 1551 aa26.58■■□□□ 1.85
SSB-206ENST00000461708 DDX17Q92841 729 aaKnown RBP26.57■■□□□ 1.84
SSB-206ENST00000461708 LRPPRCP42704 1394 aaKnown RBP26.56■■□□□ 1.84
SSB-206ENST00000461708 PIK3C2GO75747 1445 aa26.56■■□□□ 1.84
SSB-206ENST00000461708 ORAI2Q96SN7 254 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms