RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 ALKQ9UM73 1620 aa31.63■■■□□ 2.65
SRM-202ENST00000459997 BCANQ96GW7 911 aa31.62■■■□□ 2.65
SRM-202ENST00000459997 PPP1R15AO75807 674 aaPredicted RBP31.61■■■□□ 2.65
SRM-202ENST00000459997 SPHKAPQ2M3C7 1700 aa31.61■■■□□ 2.65
SRM-202ENST00000459997 HDGFP51858 240 aaKnown RBP31.59■■■□□ 2.65
SRM-202ENST00000459997 SENP3Q9H4L4 574 aaPredicted RBP31.59■■■□□ 2.65
SRM-202ENST00000459997 XIRP1Q702N8 1843 aaKnown RBP31.59■■■□□ 2.65
SRM-202ENST00000459997 PLEKHG1Q9ULL1 1385 aa31.58■■■□□ 2.65
SRM-202ENST00000459997 HFM1A2PYH4 1435 aa31.57■■■□□ 2.64
SRM-202ENST00000459997 DISP3Q9P2K9 1392 aa31.56■■■□□ 2.64
SRM-202ENST00000459997 KCNA6P17658 529 aa31.55■■■□□ 2.64
SRM-202ENST00000459997 HSPA1LP34931 641 aa31.54■■■□□ 2.64
SRM-202ENST00000459997 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.54■■■□□ 2.64
SRM-202ENST00000459997 NWD1Q149M9 1564 aa31.52■■■□□ 2.64
SRM-202ENST00000459997 NUTM2DQ5VT03 806 aaPredicted RBP31.5■■■□□ 2.63
SRM-202ENST00000459997 NKTRP30414 1462 aaKnown RBP31.49■■■□□ 2.63
SRM-202ENST00000459997 TMEM94Q12767 1356 aa31.49■■■□□ 2.63
SRM-202ENST00000459997 PROSER2Q86WR7 435 aaPredicted RBP31.47■■■□□ 2.63
SRM-202ENST00000459997 TRIM52Q96A61 297 aa31.47■■■□□ 2.63
SRM-202ENST00000459997 TRPM2O94759 1503 aa31.45■■■□□ 2.63
SRM-202ENST00000459997 CLTCL1P53675 1640 aa31.45■■■□□ 2.62
SRM-202ENST00000459997 CHD2O14647 1828 aaKnown RBP31.45■■■□□ 2.62
SRM-202ENST00000459997 RBM33Q96EV2 1170 aaKnown RBP31.43■■■□□ 2.62
SRM-202ENST00000459997 TBX22Q9Y458 520 aa31.43■■■□□ 2.62
SRM-202ENST00000459997 DIP2AQ14689 1571 aa31.43■■■□□ 2.62
SRM-202ENST00000459997 ADAMTS13Q76LX8 1427 aa31.42■■■□□ 2.62
SRM-202ENST00000459997 ZNF326Q5BKZ1 582 aaKnown RBP31.39■■■□□ 2.62
SRM-202ENST00000459997 SLC4A1APQ9BWU0 796 aaKnown RBP31.36■■■□□ 2.61
SRM-202ENST00000459997 KIF1BO60333 1816 aa31.35■■■□□ 2.61
SRM-202ENST00000459997 PIK3R4Q99570 1358 aa31.32■■■□□ 2.6
SRM-202ENST00000459997 MSH6P52701 1360 aa31.31■■■□□ 2.6
SRM-202ENST00000459997 NRXN3Q9Y4C0 1643 aa31.31■■■□□ 2.6
SRM-202ENST00000459997 SETBP1Q9Y6X0 1596 aa31.31■■■□□ 2.6
SRM-202ENST00000459997 NEXMIFQ5QGS0 1516 aa31.3■■■□□ 2.6
SRM-202ENST00000459997 ILDR2Q71H61 639 aa31.3■■■□□ 2.6
SRM-202ENST00000459997 MED1Q15648 1581 aaPredicted RBP31.3■■■□□ 2.6
SRM-202ENST00000459997 FAM135BQ49AJ0 1406 aa31.28■■■□□ 2.6
SRM-202ENST00000459997 ROBO1Q9Y6N7 1651 aa31.25■■■□□ 2.59
SRM-202ENST00000459997 PTPRUQ92729 1446 aa31.24■■■□□ 2.59
SRM-202ENST00000459997 NCOA3Q9Y6Q9 1424 aa31.24■■■□□ 2.59
SRM-202ENST00000459997 AMOTL2Q9Y2J4 779 aa31.23■■■□□ 2.59
SRM-202ENST00000459997 FOXD1Q16676 465 aa31.22■■■□□ 2.59
SRM-202ENST00000459997 C14orf37Q86TY3 774 aa31.22■■■□□ 2.59
SRM-202ENST00000459997 XRN1Q8IZH2 1706 aaKnown RBP31.2■■■□□ 2.58
SRM-202ENST00000459997 SLAIN2Q9P270 581 aa31.18■■■□□ 2.58
SRM-202ENST00000459997 METP08581 1390 aa31.17■■■□□ 2.58
SRM-202ENST00000459997 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.16■■■□□ 2.58
SRM-202ENST00000459997 MPHOSPH9Q99550 1183 aa31.16■■■□□ 2.58
SRM-202ENST00000459997 SETD5Q9C0A6 1442 aa31.14■■■□□ 2.58
SRM-202ENST00000459997 VGFO15240 615 aaPredicted RBP31.13■■■□□ 2.57
SRM-202ENST00000459997 PPLO60437 1756 aa31.12■■■□□ 2.57
SRM-202ENST00000459997 C19orf44Q9H6X5 657 aa31.12■■■□□ 2.57
SRM-202ENST00000459997 RPGRIP1LQ68CZ1 1315 aa31.12■■■□□ 2.57
SRM-202ENST00000459997 CCDC144AA2RUR9 1427 aa31.12■■■□□ 2.57
SRM-202ENST00000459997 ACIN1Q9UKV3 1341 aaKnown RBP31.09■■■□□ 2.57
SRM-202ENST00000459997 ATF3P18847 181 aa31.09■■■□□ 2.57
SRM-202ENST00000459997 CADPS2Q86UW7 1296 aa31.09■■■□□ 2.57
SRM-202ENST00000459997 SETD1AO15047 1707 aaKnown RBP31.07■■■□□ 2.56
SRM-202ENST00000459997 PHLPP1O60346 1717 aa31.07■■■□□ 2.56
SRM-202ENST00000459997 PHF23Q9BUL5 403 aaPredicted RBP31.07■■■□□ 2.56
SRM-202ENST00000459997 SOCS7O14512 581 aa31.03■■■□□ 2.56
SRM-202ENST00000459997 DCCP43146 1447 aa31.03■■■□□ 2.56
SRM-202ENST00000459997 RAB3GAP2Q9H2M9 1393 aa31.03■■■□□ 2.56
SRM-202ENST00000459997 SPATA31E1Q6ZUB1 1445 aa31.02■■■□□ 2.56
SRM-202ENST00000459997 RGL3Q3MIN7 710 aa31■■■□□ 2.55
SRM-202ENST00000459997 IFT172Q9UG01 1749 aa30.98■■■□□ 2.55
SRM-202ENST00000459997 NALCNQ8IZF0 1738 aa30.98■■■□□ 2.55
SRM-202ENST00000459997 ADGRL3Q9HAR2 1447 aa30.98■■■□□ 2.55
SRM-202ENST00000459997 COL16A1Q07092 1604 aaPredicted RBP30.97■■■□□ 2.55
SRM-202ENST00000459997 PTCH1Q13635 1447 aa30.96■■■□□ 2.55
SRM-202ENST00000459997 AHDC1Q5TGY3 1603 aaPredicted RBP30.94■■■□□ 2.54
SRM-202ENST00000459997 ADGRF5Q8IZF2 1346 aa30.94■■■□□ 2.54
SRM-202ENST00000459997 ANKRD30BQ9BXX2 1392 aa30.93■■■□□ 2.54
SRM-202ENST00000459997 MST1RQ04912 1400 aa30.93■■■□□ 2.54
SRM-202ENST00000459997 ROBO2Q9HCK4 1378 aa30.92■■■□□ 2.54
SRM-202ENST00000459997 JCADQ9P266 1359 aa30.92■■■□□ 2.54
SRM-202ENST00000459997 BRINP3Q76B58 766 aa30.91■■■□□ 2.54
SRM-202ENST00000459997 PRAG1Q86YV5 1406 aa30.9■■■□□ 2.54
SRM-202ENST00000459997 ASXL1Q8IXJ9 1541 aa30.89■■■□□ 2.54
SRM-202ENST00000459997 PIK3C2GO75747 1445 aa30.84■■■□□ 2.53
SRM-202ENST00000459997 RGS17Q9UGC6 210 aaPredicted RBP30.83■■■□□ 2.53
SRM-202ENST00000459997 NHSL1Q5SYE7 1610 aa30.82■■■□□ 2.52
SRM-202ENST00000459997 SHPRHQ149N8 1683 aa30.81■■■□□ 2.52
SRM-202ENST00000459997 C1orf167Q5SNV9 1468 aa30.78■■■□□ 2.52
SRM-202ENST00000459997 STK26Q9P289 416 aa30.78■■■□□ 2.52
SRM-202ENST00000459997 LRPPRCP42704 1394 aaKnown RBP30.77■■■□□ 2.52
SRM-202ENST00000459997 MYOM2P54296 1465 aa30.76■■■□□ 2.52
SRM-202ENST00000459997 SPATA31A6Q5VVP1 1343 aa30.76■■■□□ 2.52
SRM-202ENST00000459997 HRCP23327 699 aa30.76■■■□□ 2.51
SRM-202ENST00000459997 TECPR2O15040 1411 aa30.75■■■□□ 2.51
SRM-202ENST00000459997 TMEM132EQ6IEE7 984 aa30.75■■■□□ 2.51
SRM-202ENST00000459997 KNDC1Q76NI1 1749 aa30.75■■■□□ 2.51
SRM-202ENST00000459997 NRXN1Q9ULB1 1477 aa30.74■■■□□ 2.51
SRM-202ENST00000459997 LRP6O75581 1613 aa30.73■■■□□ 2.51
SRM-202ENST00000459997 CDC42BPGQ6DT37 1551 aa30.72■■■□□ 2.51
SRM-202ENST00000459997 DDX17Q92841 729 aaKnown RBP30.72■■■□□ 2.51
SRM-202ENST00000459997 LAMC1P11047 1609 aa30.72■■■□□ 2.51
SRM-202ENST00000459997 ABCC11Q96J66 1382 aa30.71■■■□□ 2.51
SRM-202ENST00000459997 YTHDC2Q9H6S0 1430 aaKnown RBP30.71■■■□□ 2.51
SRM-202ENST00000459997 WAPLQ7Z5K2 1190 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms