RNA–Protein interactions for RNA: ENST00000458478.5

RPSA-204, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-204ENST00000458478 TMEM94Q12767 1356 aa17.28■□□□□ 0.36
RPSA-204ENST00000458478 HDGFP51858 240 aaKnown RBP17.28■□□□□ 0.36
RPSA-204ENST00000458478 UNC13BO14795 1591 aa17.28■□□□□ 0.36
RPSA-204ENST00000458478 CHGAP10645 457 aaKnown RBP17.27■□□□□ 0.36
RPSA-204ENST00000458478 ZFYVE9O95405 1425 aa17.27■□□□□ 0.35
RPSA-204ENST00000458478 GCC2Q8IWJ2 1684 aa17.26■□□□□ 0.35
RPSA-204ENST00000458478 MYO5BQ9ULV0 1848 aa17.26■□□□□ 0.35
RPSA-204ENST00000458478 RIMS2Q9UQ26 1411 aa17.25■□□□□ 0.35
RPSA-204ENST00000458478 NUP155O75694 1391 aa17.25■□□□□ 0.35
RPSA-204ENST00000458478 TMEM131LA2VDJ0 1609 aa17.25■□□□□ 0.35
RPSA-204ENST00000458478 E9PCH4 1651 aa17.24■□□□□ 0.35
RPSA-204ENST00000458478 PPP1R15AO75807 674 aaPredicted RBP17.24■□□□□ 0.35
RPSA-204ENST00000458478 PLEKHG1Q9ULL1 1385 aa17.24■□□□□ 0.35
RPSA-204ENST00000458478 FAM135BQ49AJ0 1406 aa17.23■□□□□ 0.35
RPSA-204ENST00000458478 NUTM2DQ5VT03 806 aaPredicted RBP17.23■□□□□ 0.35
RPSA-204ENST00000458478 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.22■□□□□ 0.35
RPSA-204ENST00000458478 PHF23Q9BUL5 403 aaPredicted RBP17.22■□□□□ 0.35
RPSA-204ENST00000458478 TBX22Q9Y458 520 aa17.22■□□□□ 0.35
RPSA-204ENST00000458478 IQGAP3Q86VI3 1631 aa17.21■□□□□ 0.35
RPSA-204ENST00000458478 NWD1Q149M9 1564 aa17.19■□□□□ 0.34
RPSA-204ENST00000458478 CHD2O14647 1828 aaKnown RBP17.19■□□□□ 0.34
RPSA-204ENST00000458478 NKTRP30414 1462 aaKnown RBP17.18■□□□□ 0.34
RPSA-204ENST00000458478 SLAIN2Q9P270 581 aa17.17■□□□□ 0.34
RPSA-204ENST00000458478 MSH6P52701 1360 aa17.16■□□□□ 0.34
RPSA-204ENST00000458478 ADAMTS13Q76LX8 1427 aa17.15■□□□□ 0.34
RPSA-204ENST00000458478 RGS17Q9UGC6 210 aaPredicted RBP17.15■□□□□ 0.34
RPSA-204ENST00000458478 ROBO1Q9Y6N7 1651 aa17.14■□□□□ 0.33
RPSA-204ENST00000458478 RRBP1Q9P2E9 1410 aaKnown RBP17.12■□□□□ 0.33
RPSA-204ENST00000458478 NCOA3Q9Y6Q9 1424 aa17.12■□□□□ 0.33
RPSA-204ENST00000458478 AMOTL2Q9Y2J4 779 aa17.11■□□□□ 0.33
RPSA-204ENST00000458478 PIK3R4Q99570 1358 aa17.11■□□□□ 0.33
RPSA-204ENST00000458478 ZNF326Q5BKZ1 582 aaKnown RBP17.1■□□□□ 0.33
RPSA-204ENST00000458478 C14orf37Q86TY3 774 aa17.1■□□□□ 0.33
RPSA-204ENST00000458478 C19orf44Q9H6X5 657 aa17.09■□□□□ 0.33
RPSA-204ENST00000458478 DIP2AQ14689 1571 aa17.08■□□□□ 0.32
RPSA-204ENST00000458478 NAIPQ13075 1403 aa17.08■□□□□ 0.32
RPSA-204ENST00000458478 PTPRUQ92729 1446 aa17.08■□□□□ 0.32
RPSA-204ENST00000458478 SPHKAPQ2M3C7 1700 aa17.07■□□□□ 0.32
RPSA-204ENST00000458478 ATF3P18847 181 aa17.06■□□□□ 0.32
RPSA-204ENST00000458478 CADPS2Q86UW7 1296 aa17.06■□□□□ 0.32
RPSA-204ENST00000458478 TRPM2O94759 1503 aa17.06■□□□□ 0.32
RPSA-204ENST00000458478 PHLPP1O60346 1717 aa17.04■□□□□ 0.32
RPSA-204ENST00000458478 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.04■□□□□ 0.32
RPSA-204ENST00000458478 POTEAQ6S8J7 498 aa17.04■□□□□ 0.32
RPSA-204ENST00000458478 TRIM52Q96A61 297 aa17.04■□□□□ 0.32
RPSA-204ENST00000458478 NRXN3Q9Y4C0 1643 aa17.03■□□□□ 0.32
RPSA-204ENST00000458478 METP08581 1390 aa17.02■□□□□ 0.32
RPSA-204ENST00000458478 JCADQ9P266 1359 aa17.02■□□□□ 0.32
RPSA-204ENST00000458478 CLTCL1P53675 1640 aa17.02■□□□□ 0.31
RPSA-204ENST00000458478 SETBP1Q9Y6X0 1596 aa17.02■□□□□ 0.31
RPSA-204ENST00000458478 HFM1A2PYH4 1435 aa16.99■□□□□ 0.31
RPSA-204ENST00000458478 BRINP3Q76B58 766 aa16.99■□□□□ 0.31
RPSA-204ENST00000458478 NEXMIFQ5QGS0 1516 aa16.99■□□□□ 0.31
RPSA-204ENST00000458478 SLC4A1APQ9BWU0 796 aaKnown RBP16.98■□□□□ 0.31
RPSA-204ENST00000458478 COL16A1Q07092 1604 aaPredicted RBP16.98■□□□□ 0.31
RPSA-204ENST00000458478 XRN1Q8IZH2 1706 aaKnown RBP16.97■□□□□ 0.31
RPSA-204ENST00000458478 KIF1BO60333 1816 aa16.97■□□□□ 0.31
RPSA-204ENST00000458478 VGFO15240 615 aaPredicted RBP16.96■□□□□ 0.31
RPSA-204ENST00000458478 SPATA31A6Q5VVP1 1343 aa16.95■□□□□ 0.3
RPSA-204ENST00000458478 AHDC1Q5TGY3 1603 aaPredicted RBP16.94■□□□□ 0.3
RPSA-204ENST00000458478 DCCP43146 1447 aa16.94■□□□□ 0.3
RPSA-204ENST00000458478 FOXD1Q16676 465 aa16.93■□□□□ 0.3
RPSA-204ENST00000458478 RPGRIP1LQ68CZ1 1315 aa16.93■□□□□ 0.3
RPSA-204ENST00000458478 MST1RQ04912 1400 aa16.92■□□□□ 0.3
RPSA-204ENST00000458478 MEX3CQ5U5Q3 659 aaKnown RBP16.91■□□□□ 0.3
RPSA-204ENST00000458478 LRP6O75581 1613 aa16.91■□□□□ 0.3
RPSA-204ENST00000458478 ADGRL3Q9HAR2 1447 aa16.89■□□□□ 0.29
RPSA-204ENST00000458478 DDX17Q92841 729 aaKnown RBP16.89■□□□□ 0.29
RPSA-204ENST00000458478 ASXL1Q8IXJ9 1541 aa16.89■□□□□ 0.29
RPSA-204ENST00000458478 SHPRHQ149N8 1683 aa16.88■□□□□ 0.29
RPSA-204ENST00000458478 NUTM2BA6NNL0 878 aaPredicted RBP16.88■□□□□ 0.29
RPSA-204ENST00000458478 NUTM2EB1AL46 878 aaPredicted RBP16.88■□□□□ 0.29
RPSA-204ENST00000458478 NUTM2AQ8IVF1 878 aaPredicted RBP16.88■□□□□ 0.29
RPSA-204ENST00000458478 LRRC59Q96AG4 307 aaKnown RBP16.87■□□□□ 0.29
RPSA-204ENST00000458478 MPHOSPH9Q99550 1183 aa16.87■□□□□ 0.29
RPSA-204ENST00000458478 ROBO2Q9HCK4 1378 aa16.87■□□□□ 0.29
RPSA-204ENST00000458478 SETD5Q9C0A6 1442 aa16.87■□□□□ 0.29
RPSA-204ENST00000458478 ZNF772Q68DY9 489 aaPredicted RBP16.86■□□□□ 0.29
RPSA-204ENST00000458478 SETD1AO15047 1707 aaKnown RBP16.86■□□□□ 0.29
RPSA-204ENST00000458478 NALCNQ8IZF0 1738 aa16.86■□□□□ 0.29
RPSA-204ENST00000458478 RGL3Q3MIN7 710 aa16.85■□□□□ 0.29
RPSA-204ENST00000458478 PPLO60437 1756 aa16.84■□□□□ 0.29
RPSA-204ENST00000458478 ADGRF5Q8IZF2 1346 aa16.84■□□□□ 0.29
RPSA-204ENST00000458478 PTCH1Q13635 1447 aa16.84■□□□□ 0.29
RPSA-204ENST00000458478 C1orf167Q5SNV9 1468 aa16.84■□□□□ 0.29
RPSA-204ENST00000458478 NHSL1Q5SYE7 1610 aa16.84■□□□□ 0.29
RPSA-204ENST00000458478 ORAI2Q96SN7 254 aa16.83■□□□□ 0.28
RPSA-204ENST00000458478 CCDC144AA2RUR9 1427 aa16.81■□□□□ 0.28
RPSA-204ENST00000458478 PRAG1Q86YV5 1406 aa16.8■□□□□ 0.28
RPSA-204ENST00000458478 SPATA31E1Q6ZUB1 1445 aa16.79■□□□□ 0.28
RPSA-204ENST00000458478 PNPLA6Q8IY17 1366 aa16.79■□□□□ 0.28
RPSA-204ENST00000458478 AFF2P51816 1311 aa16.79■□□□□ 0.28
RPSA-204ENST00000458478 RXRBP28702 533 aa16.79■□□□□ 0.28
RPSA-204ENST00000458478 STK26Q9P289 416 aa16.78■□□□□ 0.28
RPSA-204ENST00000458478 SOS2Q07890 1332 aaPredicted RBP16.77■□□□□ 0.28
RPSA-204ENST00000458478 TMEM132EQ6IEE7 984 aa16.77■□□□□ 0.28
RPSA-204ENST00000458478 WAPLQ7Z5K2 1190 aa16.77■□□□□ 0.28
RPSA-204ENST00000458478 C8orf37Q96NL8 207 aa16.77■□□□□ 0.28
RPSA-204ENST00000458478 ANKRD30BQ9BXX2 1392 aa16.77■□□□□ 0.27
RPSA-204ENST00000458478 ESCO1Q5FWF5 840 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms