RNA–Protein interactions for RNA: ENST00000457431.1

FARP1-206, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-206ENST00000457431 RGS20O76081 388 aa12□□□□□ -0.49
FARP1-206ENST00000457431 RBM46Q8TBY0 533 aaKnown RBP12□□□□□ -0.49
FARP1-206ENST00000457431 MTRQ99707 1265 aa12□□□□□ -0.49
FARP1-206ENST00000457431 DNAJB2P25686 324 aa11.98□□□□□ -0.49
FARP1-206ENST00000457431 SMYD5Q6GMV2 418 aa11.98□□□□□ -0.49
FARP1-206ENST00000457431 C14orf37Q86TY3 774 aa11.97□□□□□ -0.49
FARP1-206ENST00000457431 RCCD1A6NED2 376 aa11.96□□□□□ -0.49
FARP1-206ENST00000457431 SLC4A3P48751 1232 aa11.96□□□□□ -0.49
FARP1-206ENST00000457431 ZNF516Q92618 1163 aa11.96□□□□□ -0.49
FARP1-206ENST00000457431 IL21Q9HBE4 155 aa11.96□□□□□ -0.49
FARP1-206ENST00000457431 TMEM134Q9H6X4 195 aa11.95□□□□□ -0.5
FARP1-206ENST00000457431 HIC1Q14526 733 aa11.94□□□□□ -0.5
FARP1-206ENST00000457431 NECTIN2Q92692 538 aa11.94□□□□□ -0.5
FARP1-206ENST00000457431 FECHP22830 423 aa11.93□□□□□ -0.5
FARP1-206ENST00000457431 COPS2P61201 443 aa11.93□□□□□ -0.5
FARP1-206ENST00000457431 GPR37O15354 613 aa11.91□□□□□ -0.5
FARP1-206ENST00000457431 PXYLP1Q8TE99 480 aa11.9□□□□□ -0.5
FARP1-206ENST00000457431 GNPATO15228 680 aa11.89□□□□□ -0.51
FARP1-206ENST00000457431 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.88□□□□□ -0.51
FARP1-206ENST00000457431 OATP04181 439 aa11.88□□□□□ -0.51
FARP1-206ENST00000457431 NKX2-3Q8TAU0 364 aa11.88□□□□□ -0.51
FARP1-206ENST00000457431 METTL3Q86U44 580 aaKnown RBP11.87□□□□□ -0.51
FARP1-206ENST00000457431 IRX2Q9BZI1 471 aaPredicted RBP11.87□□□□□ -0.51
FARP1-206ENST00000457431 PCDHB3Q9Y5E6 796 aa11.87□□□□□ -0.51
FARP1-206ENST00000457431 GPIHBP1Q8IV16 184 aa11.86□□□□□ -0.51
FARP1-206ENST00000457431 CFHP08603 1231 aa11.85□□□□□ -0.51
FARP1-206ENST00000457431 PPP1R18Q6NYC8 613 aa11.85□□□□□ -0.51
FARP1-206ENST00000457431 PRR14Q9BWN1 585 aa11.85□□□□□ -0.51
FARP1-206ENST00000457431 SLC10A3P09131 477 aa11.84□□□□□ -0.51
FARP1-206ENST00000457431 BLOC1S3Q6QNY0 202 aa11.84□□□□□ -0.51
FARP1-206ENST00000457431 NLRP7Q8WX94 980 aa11.83□□□□□ -0.52
FARP1-206ENST00000457431 ZPR1O75312 459 aa11.82□□□□□ -0.52
FARP1-206ENST00000457431 KMT5BQ4FZB7 885 aa11.82□□□□□ -0.52
FARP1-206ENST00000457431 ACTN4O43707 911 aaKnown RBP11.8□□□□□ -0.52
FARP1-206ENST00000457431 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.8□□□□□ -0.52
FARP1-206ENST00000457431 TLL1O43897 1013 aa11.79□□□□□ -0.52
FARP1-206ENST00000457431 PHOX2BQ99453 314 aa11.78□□□□□ -0.52
FARP1-206ENST00000457431 PRKD2Q9BZL6 878 aa11.78□□□□□ -0.52
FARP1-206ENST00000457431 RANGAP1P46060 587 aaPredicted RBP11.74□□□□□ -0.53
FARP1-206ENST00000457431 RDH13Q8NBN7 331 aa11.74□□□□□ -0.53
FARP1-206ENST00000457431 DDX11L8A8MPP1 907 aa11.73□□□□□ -0.53
FARP1-206ENST00000457431 GGCXP38435 758 aa11.73□□□□□ -0.53
FARP1-206ENST00000457431 RSPH4AQ5TD94 716 aa11.73□□□□□ -0.53
FARP1-206ENST00000457431 PUS10Q3MIT2 529 aaKnown RBP11.72□□□□□ -0.53
FARP1-206ENST00000457431 NR1I2O75469 434 aa11.69□□□□□ -0.54
FARP1-206ENST00000457431 TMUB1Q9BVT8 246 aa11.69□□□□□ -0.54
FARP1-206ENST00000457431 RNF223E7ERA6 249 aa11.68□□□□□ -0.54
FARP1-206ENST00000457431 V9GY48 417 aaPredicted RBP11.68□□□□□ -0.54
FARP1-206ENST00000457431 S1PR4O95977 384 aa11.67□□□□□ -0.54
FARP1-206ENST00000457431 MAP2K5Q13163 448 aa11.67□□□□□ -0.54
FARP1-206ENST00000457431 Q6ZNB5 142 aa11.67□□□□□ -0.54
FARP1-206ENST00000457431 SCUBE3Q8IX30 993 aa11.67□□□□□ -0.54
FARP1-206ENST00000457431 PPEF1O14829 653 aaPredicted RBP11.66□□□□□ -0.54
FARP1-206ENST00000457431 GFRA3O60609 400 aa11.66□□□□□ -0.54
FARP1-206ENST00000457431 ADH1BP00325 375 aa11.66□□□□□ -0.54
FARP1-206ENST00000457431 FUT2Q10981 343 aa11.65□□□□□ -0.54
FARP1-206ENST00000457431 SULF1Q8IWU6 871 aa11.65□□□□□ -0.54
FARP1-206ENST00000457431 IRF6O14896 467 aa11.63□□□□□ -0.55
FARP1-206ENST00000457431 GCGRP47871 477 aa11.63□□□□□ -0.55
FARP1-206ENST00000457431 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.62□□□□□ -0.55
FARP1-206ENST00000457431 EMID1Q96A84 441 aaPredicted RBP11.62□□□□□ -0.55
FARP1-206ENST00000457431 PODXL2Q9NZ53 605 aa11.62□□□□□ -0.55
FARP1-206ENST00000457431 MORN1Q5T089 497 aa11.61□□□□□ -0.55
FARP1-206ENST00000457431 SLC6A16Q9GZN6 736 aa11.61□□□□□ -0.55
FARP1-206ENST00000457431 MINK1Q8N4C8 1332 aaPredicted RBP11.6□□□□□ -0.55
FARP1-206ENST00000457431 ATP6V1AP38606 617 aa11.6□□□□□ -0.55
FARP1-206ENST00000457431 MDM2Q00987 491 aaPredicted RBP11.6□□□□□ -0.55
FARP1-206ENST00000457431 LAPTM4AQ15012 233 aa11.6□□□□□ -0.55
FARP1-206ENST00000457431 ANKLE1Q8NAG6 615 aa11.6□□□□□ -0.55
FARP1-206ENST00000457431 CCDC102AQ96A19 550 aa11.6□□□□□ -0.55
FARP1-206ENST00000457431 SPSB2Q99619 263 aa11.6□□□□□ -0.55
FARP1-206ENST00000457431 SLC19A1P41440 591 aa11.59□□□□□ -0.55
FARP1-206ENST00000457431 SLC27A5Q9Y2P5 690 aa11.58□□□□□ -0.56
FARP1-206ENST00000457431 LMOD2Q6P5Q4 547 aa11.57□□□□□ -0.56
FARP1-206ENST00000457431 PDZRN3Q9UPQ7 1066 aa11.57□□□□□ -0.56
FARP1-206ENST00000457431 SUPT5HO00267 1087 aaKnown RBP11.56□□□□□ -0.56
FARP1-206ENST00000457431 NRG2O14511 850 aaPredicted RBP11.55□□□□□ -0.56
FARP1-206ENST00000457431 CD46P15529 392 aa11.55□□□□□ -0.56
FARP1-206ENST00000457431 PLA2G2CQ5R387 149 aa11.55□□□□□ -0.56
FARP1-206ENST00000457431 LIAT1Q6ZQX7 453 aa11.55□□□□□ -0.56
FARP1-206ENST00000457431 THAP11Q96EK4 314 aa11.55□□□□□ -0.56
FARP1-206ENST00000457431 LCE2BO14633 110 aa11.54□□□□□ -0.56
FARP1-206ENST00000457431 FMNL1O95466 1100 aaPredicted RBP11.52□□□□□ -0.57
FARP1-206ENST00000457431 SPRYD7Q5W111 196 aa11.52□□□□□ -0.57
FARP1-206ENST00000457431 FAM160A2Q8N612 972 aaPredicted RBP11.51□□□□□ -0.57
FARP1-206ENST00000457431 PRDM9Q9NQV7 894 aa11.51□□□□□ -0.57
FARP1-206ENST00000457431 GRIPAP1Q4V328 841 aa11.5□□□□□ -0.57
FARP1-206ENST00000457431 BRICD5Q6PL45 260 aa11.5□□□□□ -0.57
FARP1-206ENST00000457431 RNF19BQ6ZMZ0 732 aa11.5□□□□□ -0.57
FARP1-206ENST00000457431 TRIM67Q6ZTA4 783 aa11.5□□□□□ -0.57
FARP1-206ENST00000457431 KDM4AO75164 1064 aa11.49□□□□□ -0.57
FARP1-206ENST00000457431 TRAF7Q6Q0C0 670 aa11.49□□□□□ -0.57
FARP1-206ENST00000457431 ZNF598Q86UK7 904 aaKnown RBP11.49□□□□□ -0.57
FARP1-206ENST00000457431 KRI1Q8N9T8 703 aaKnown RBP11.49□□□□□ -0.57
FARP1-206ENST00000457431 GPCPD1Q9NPB8 672 aa11.49□□□□□ -0.57
FARP1-206ENST00000457431 ZNF697Q5TEC3 545 aa11.48□□□□□ -0.57
FARP1-206ENST00000457431 HLA-CQ95604 372 aa11.48□□□□□ -0.57
FARP1-206ENST00000457431 FCF1Q9Y324 198 aaKnown RBP11.48□□□□□ -0.57
FARP1-206ENST00000457431 CLCN1P35523 988 aa11.47□□□□□ -0.57
FARP1-206ENST00000457431 SALL2Q9Y467 1007 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms