RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 MSH6P52701 1360 aa13.37□□□□□ -0.27
PKP4-207ENST00000457109 TBX22Q9Y458 520 aa13.37□□□□□ -0.27
PKP4-207ENST00000457109 SYNMO15061 1565 aa13.37□□□□□ -0.27
PKP4-207ENST00000457109 ZNF326Q5BKZ1 582 aaKnown RBP13.35□□□□□ -0.27
PKP4-207ENST00000457109 NUTM2DQ5VT03 806 aaPredicted RBP13.35□□□□□ -0.27
PKP4-207ENST00000457109 SLAIN2Q9P270 581 aa13.35□□□□□ -0.27
PKP4-207ENST00000457109 FAM135BQ49AJ0 1406 aa13.35□□□□□ -0.27
PKP4-207ENST00000457109 RIMS2Q9UQ26 1411 aa13.35□□□□□ -0.27
PKP4-207ENST00000457109 PLEKHG1Q9ULL1 1385 aa13.34□□□□□ -0.27
PKP4-207ENST00000457109 ADGRB3O60242 1522 aa13.34□□□□□ -0.27
PKP4-207ENST00000457109 ATF3P18847 181 aa13.33□□□□□ -0.28
PKP4-207ENST00000457109 MED1Q15648 1581 aaPredicted RBP13.32□□□□□ -0.28
PKP4-207ENST00000457109 KDM5AP29375 1690 aaKnown RBP13.31□□□□□ -0.28
PKP4-207ENST00000457109 CADPS2Q86UW7 1296 aa13.31□□□□□ -0.28
PKP4-207ENST00000457109 TRIM52Q96A61 297 aa13.3□□□□□ -0.28
PKP4-207ENST00000457109 C19orf44Q9H6X5 657 aa13.3□□□□□ -0.28
PKP4-207ENST00000457109 TET3O43151 1660 aa13.3□□□□□ -0.28
PKP4-207ENST00000457109 AMOTL2Q9Y2J4 779 aa13.29□□□□□ -0.28
PKP4-207ENST00000457109 STRCP1A6NGW2 1772 aa13.29□□□□□ -0.28
PKP4-207ENST00000457109 NKTRP30414 1462 aaKnown RBP13.29□□□□□ -0.28
PKP4-207ENST00000457109 ZFYVE9O95405 1425 aa13.28□□□□□ -0.28
PKP4-207ENST00000457109 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
PKP4-207ENST00000457109 PIK3R4Q99570 1358 aa13.27□□□□□ -0.29
PKP4-207ENST00000457109 NCOA3Q9Y6Q9 1424 aa13.27□□□□□ -0.29
PKP4-207ENST00000457109 MEX3CQ5U5Q3 659 aaKnown RBP13.25□□□□□ -0.29
PKP4-207ENST00000457109 UNC13BO14795 1591 aa13.24□□□□□ -0.29
PKP4-207ENST00000457109 JCADQ9P266 1359 aa13.23□□□□□ -0.29
PKP4-207ENST00000457109 VGFO15240 615 aaPredicted RBP13.23□□□□□ -0.29
PKP4-207ENST00000457109 TMEM131LA2VDJ0 1609 aa13.22□□□□□ -0.29
PKP4-207ENST00000457109 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
PKP4-207ENST00000457109 GCC2Q8IWJ2 1684 aa13.21□□□□□ -0.29
PKP4-207ENST00000457109 RGS17Q9UGC6 210 aaPredicted RBP13.21□□□□□ -0.29
PKP4-207ENST00000457109 ADAMTS13Q76LX8 1427 aa13.2□□□□□ -0.3
PKP4-207ENST00000457109 IQGAP3Q86VI3 1631 aa13.2□□□□□ -0.3
PKP4-207ENST00000457109 NWD1Q149M9 1564 aa13.2□□□□□ -0.3
PKP4-207ENST00000457109 SPATA31A6Q5VVP1 1343 aa13.19□□□□□ -0.3
PKP4-207ENST00000457109 E9PCH4 1651 aa13.18□□□□□ -0.3
PKP4-207ENST00000457109 POTEAQ6S8J7 498 aa13.18□□□□□ -0.3
PKP4-207ENST00000457109 DIP2AQ14689 1571 aa13.18□□□□□ -0.3
PKP4-207ENST00000457109 TRPM2O94759 1503 aa13.18□□□□□ -0.3
PKP4-207ENST00000457109 RPGRIP1LQ68CZ1 1315 aa13.17□□□□□ -0.3
PKP4-207ENST00000457109 RRBP1Q9P2E9 1410 aaKnown RBP13.17□□□□□ -0.3
PKP4-207ENST00000457109 ZNF772Q68DY9 489 aaPredicted RBP13.17□□□□□ -0.3
PKP4-207ENST00000457109 ROBO1Q9Y6N7 1651 aa13.17□□□□□ -0.3
PKP4-207ENST00000457109 NUTM2BA6NNL0 878 aaPredicted RBP13.16□□□□□ -0.3
PKP4-207ENST00000457109 NUTM2EB1AL46 878 aaPredicted RBP13.16□□□□□ -0.3
PKP4-207ENST00000457109 BRINP3Q76B58 766 aa13.16□□□□□ -0.3
PKP4-207ENST00000457109 NUTM2AQ8IVF1 878 aaPredicted RBP13.16□□□□□ -0.3
PKP4-207ENST00000457109 LRRC59Q96AG4 307 aaKnown RBP13.16□□□□□ -0.3
PKP4-207ENST00000457109 NAIPQ13075 1403 aa13.15□□□□□ -0.3
PKP4-207ENST00000457109 XIRP1Q702N8 1843 aaKnown RBP13.15□□□□□ -0.3
PKP4-207ENST00000457109 PTPRUQ92729 1446 aa13.13□□□□□ -0.31
PKP4-207ENST00000457109 CHD2O14647 1828 aaKnown RBP13.13□□□□□ -0.31
PKP4-207ENST00000457109 METP08581 1390 aa13.13□□□□□ -0.31
PKP4-207ENST00000457109 ACIN1Q9UKV3 1341 aaKnown RBP13.13□□□□□ -0.31
PKP4-207ENST00000457109 DCCP43146 1447 aa13.12□□□□□ -0.31
PKP4-207ENST00000457109 RGL3Q3MIN7 710 aa13.11□□□□□ -0.31
PKP4-207ENST00000457109 HFM1A2PYH4 1435 aa13.11□□□□□ -0.31
PKP4-207ENST00000457109 MYO5BQ9ULV0 1848 aa13.11□□□□□ -0.31
PKP4-207ENST00000457109 PHLPP1O60346 1717 aa13.1□□□□□ -0.31
PKP4-207ENST00000457109 RXRBP28702 533 aa13.1□□□□□ -0.31
PKP4-207ENST00000457109 SETBP1Q9Y6X0 1596 aa13.08□□□□□ -0.32
PKP4-207ENST00000457109 FOXD1Q16676 465 aa13.08□□□□□ -0.32
PKP4-207ENST00000457109 MPHOSPH9Q99550 1183 aa13.08□□□□□ -0.32
PKP4-207ENST00000457109 STK26Q9P289 416 aa13.07□□□□□ -0.32
PKP4-207ENST00000457109 SPHKAPQ2M3C7 1700 aa13.07□□□□□ -0.32
PKP4-207ENST00000457109 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.07□□□□□ -0.32
PKP4-207ENST00000457109 ADGRL3Q9HAR2 1447 aa13.06□□□□□ -0.32
PKP4-207ENST00000457109 NGLY1Q96IV0 654 aa13.06□□□□□ -0.32
PKP4-207ENST00000457109 CCDC144AA2RUR9 1427 aa13.05□□□□□ -0.32
PKP4-207ENST00000457109 MST1RQ04912 1400 aa13.05□□□□□ -0.32
PKP4-207ENST00000457109 ESCO1Q5FWF5 840 aa13.05□□□□□ -0.32
PKP4-207ENST00000457109 DDX17Q92841 729 aaKnown RBP13.05□□□□□ -0.32
PKP4-207ENST00000457109 C8orf37Q96NL8 207 aa13.05□□□□□ -0.32
PKP4-207ENST00000457109 AFF2P51816 1311 aa13.05□□□□□ -0.32
PKP4-207ENST00000457109 AHDC1Q5TGY3 1603 aaPredicted RBP13.04□□□□□ -0.32
PKP4-207ENST00000457109 ORAI2Q96SN7 254 aa13.04□□□□□ -0.32
PKP4-207ENST00000457109 QTRT2Q9H974 415 aaKnown RBP13.04□□□□□ -0.32
PKP4-207ENST00000457109 SETD5Q9C0A6 1442 aa13.04□□□□□ -0.32
PKP4-207ENST00000457109 NEXMIFQ5QGS0 1516 aa13.03□□□□□ -0.32
PKP4-207ENST00000457109 CLTCL1P53675 1640 aa13.03□□□□□ -0.32
PKP4-207ENST00000457109 COL16A1Q07092 1604 aaPredicted RBP13.03□□□□□ -0.32
PKP4-207ENST00000457109 ADAMTS2O95450 1211 aa13.03□□□□□ -0.32
PKP4-207ENST00000457109 ANKRD30BQ9BXX2 1392 aa13.03□□□□□ -0.32
PKP4-207ENST00000457109 ASXL1Q8IXJ9 1541 aa13.03□□□□□ -0.32
PKP4-207ENST00000457109 ROBO2Q9HCK4 1378 aa13.02□□□□□ -0.33
PKP4-207ENST00000457109 C1orf167Q5SNV9 1468 aa13.02□□□□□ -0.33
PKP4-207ENST00000457109 RBM6P78332 1123 aaKnown RBP13.01□□□□□ -0.33
PKP4-207ENST00000457109 NPHP3Q7Z494 1330 aa13.01□□□□□ -0.33
PKP4-207ENST00000457109 ADGRF5Q8IZF2 1346 aa13.01□□□□□ -0.33
PKP4-207ENST00000457109 PTCH1Q13635 1447 aa13.01□□□□□ -0.33
PKP4-207ENST00000457109 KIF1BO60333 1816 aa13□□□□□ -0.33
PKP4-207ENST00000457109 LRP6O75581 1613 aa13□□□□□ -0.33
PKP4-207ENST00000457109 LRPPRCP42704 1394 aaKnown RBP13□□□□□ -0.33
PKP4-207ENST00000457109 XRN1Q8IZH2 1706 aaKnown RBP12.99□□□□□ -0.33
PKP4-207ENST00000457109 NRXN3Q9Y4C0 1643 aa12.99□□□□□ -0.33
PKP4-207ENST00000457109 NUTM2FA1L443 756 aa12.99□□□□□ -0.33
PKP4-207ENST00000457109 TMEM132EQ6IEE7 984 aa12.99□□□□□ -0.33
PKP4-207ENST00000457109 WAPLQ7Z5K2 1190 aa12.99□□□□□ -0.33
PKP4-207ENST00000457109 PNPLA6Q8IY17 1366 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms