RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 CERKQ8TCT0 537 aa11.97□□□□□ -0.49
COMMD3-204ENST00000456711 ZFRQ96KR1 1074 aaKnown RBP11.96□□□□□ -0.49
COMMD3-204ENST00000456711 NYAP1Q6ZVC0 841 aa11.95□□□□□ -0.5
COMMD3-204ENST00000456711 FHAD1B1AJZ9 1412 aa11.94□□□□□ -0.5
COMMD3-204ENST00000456711 LAPTM4BQ86VI4 370 aa11.93□□□□□ -0.5
COMMD3-204ENST00000456711 KIAA1468Q9P260 1216 aa11.93□□□□□ -0.5
COMMD3-204ENST00000456711 PCDHGA10Q9Y5H3 936 aa11.93□□□□□ -0.5
COMMD3-204ENST00000456711 NCKAP5LQ9HCH0 1330 aa11.92□□□□□ -0.5
COMMD3-204ENST00000456711 SEPT9Q9UHD8 586 aaPredicted RBP11.91□□□□□ -0.5
COMMD3-204ENST00000456711 PCF11O94913 1555 aaKnown RBP11.91□□□□□ -0.5
COMMD3-204ENST00000456711 PLB1Q6P1J6 1458 aa11.89□□□□□ -0.51
COMMD3-204ENST00000456711 TEX14Q8IWB6 1497 aa11.89□□□□□ -0.51
COMMD3-204ENST00000456711 HS6ST3Q8IZP7 471 aa11.89□□□□□ -0.51
COMMD3-204ENST00000456711 PTPRMP28827 1452 aa11.89□□□□□ -0.51
COMMD3-204ENST00000456711 ASXL2Q76L83 1435 aa11.88□□□□□ -0.51
COMMD3-204ENST00000456711 NRG2O14511 850 aaPredicted RBP11.88□□□□□ -0.51
COMMD3-204ENST00000456711 MAP3K4Q9Y6R4 1608 aa11.88□□□□□ -0.51
COMMD3-204ENST00000456711 RUSC2Q8N2Y8 1516 aa11.87□□□□□ -0.51
COMMD3-204ENST00000456711 PRKD2Q9BZL6 878 aa11.87□□□□□ -0.51
COMMD3-204ENST00000456711 ZNF787Q6DD87 383 aa11.86□□□□□ -0.51
COMMD3-204ENST00000456711 KIF21BO75037 1637 aa11.86□□□□□ -0.51
COMMD3-204ENST00000456711 ZNF775Q96BV0 537 aaPredicted RBP11.85□□□□□ -0.51
COMMD3-204ENST00000456711 HPS5Q9UPZ3 1129 aa11.85□□□□□ -0.51
COMMD3-204ENST00000456711 NKX1-1Q15270 411 aaPredicted RBP11.84□□□□□ -0.51
COMMD3-204ENST00000456711 ABCC2Q92887 1545 aa11.84□□□□□ -0.51
COMMD3-204ENST00000456711 MAP3K9P80192 1104 aa11.83□□□□□ -0.52
COMMD3-204ENST00000456711 TSR3Q9UJK0 312 aaKnown RBP11.83□□□□□ -0.52
COMMD3-204ENST00000456711 ADAMTSL3P82987 1691 aa11.82□□□□□ -0.52
COMMD3-204ENST00000456711 ERICH3Q5RHP9 1530 aa11.81□□□□□ -0.52
COMMD3-204ENST00000456711 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.81□□□□□ -0.52
COMMD3-204ENST00000456711 EPRSP07814 1512 aaKnown RBP11.81□□□□□ -0.52
COMMD3-204ENST00000456711 PDE4AP27815 886 aa11.8□□□□□ -0.52
COMMD3-204ENST00000456711 EMILIN3Q9NT22 766 aa11.8□□□□□ -0.52
COMMD3-204ENST00000456711 CUL7Q14999 1698 aa11.8□□□□□ -0.52
COMMD3-204ENST00000456711 TYW1BQ6NUM6 668 aa11.79□□□□□ -0.52
COMMD3-204ENST00000456711 KIAA0586Q9BVV6 1533 aa11.79□□□□□ -0.52
COMMD3-204ENST00000456711 FAM98CQ17RN3 349 aaKnown RBP11.78□□□□□ -0.52
COMMD3-204ENST00000456711 TJAP1Q5JTD0 557 aa11.78□□□□□ -0.52
COMMD3-204ENST00000456711 LRCH3Q96II8 777 aa11.78□□□□□ -0.52
COMMD3-204ENST00000456711 PTPRGP23470 1445 aa11.77□□□□□ -0.52
COMMD3-204ENST00000456711 ONECUT3O60422 494 aaPredicted RBP11.77□□□□□ -0.53
COMMD3-204ENST00000456711 HSPA2P54652 639 aa11.77□□□□□ -0.53
COMMD3-204ENST00000456711 FBXW7Q969H0 707 aa11.77□□□□□ -0.53
COMMD3-204ENST00000456711 TRIM6-TRIM34B2RNG4 842 aa11.76□□□□□ -0.53
COMMD3-204ENST00000456711 PHF14O94880 888 aa11.76□□□□□ -0.53
COMMD3-204ENST00000456711 WRNQ14191 1432 aaPredicted RBP eCLIP11.76□□□□□ -0.53
COMMD3-204ENST00000456711 PPP1R18Q6NYC8 613 aa11.75□□□□□ -0.53
COMMD3-204ENST00000456711 LARP6Q9BRS8 491 aaKnown RBP11.75□□□□□ -0.53
COMMD3-204ENST00000456711 CHGAP10645 457 aaKnown RBP11.74□□□□□ -0.53
COMMD3-204ENST00000456711 C6orf132Q5T0Z8 1188 aa11.74□□□□□ -0.53
COMMD3-204ENST00000456711 DDX27Q96GQ7 796 aaKnown RBP11.73□□□□□ -0.53
COMMD3-204ENST00000456711 V9GY48 417 aaPredicted RBP11.73□□□□□ -0.53
COMMD3-204ENST00000456711 MADDQ8WXG6 1647 aa11.72□□□□□ -0.53
COMMD3-204ENST00000456711 UHRF1BP1LA0JNW5 1464 aa11.72□□□□□ -0.53
COMMD3-204ENST00000456711 PDZRN3Q9UPQ7 1066 aa11.72□□□□□ -0.53
COMMD3-204ENST00000456711 TTBK1Q5TCY1 1321 aaPredicted RBP11.7□□□□□ -0.54
COMMD3-204ENST00000456711 BCORL1Q5H9F3 1711 aa11.7□□□□□ -0.54
COMMD3-204ENST00000456711 MTRQ99707 1265 aa11.69□□□□□ -0.54
COMMD3-204ENST00000456711 MAGI3Q5TCQ9 1506 aa11.69□□□□□ -0.54
COMMD3-204ENST00000456711 TNIKQ9UKE5 1360 aa11.68□□□□□ -0.54
COMMD3-204ENST00000456711 PPP4CP60510 307 aa11.68□□□□□ -0.54
COMMD3-204ENST00000456711 MFSD10Q14728 455 aa11.68□□□□□ -0.54
COMMD3-204ENST00000456711 KDM5BQ9UGL1 1544 aa11.67□□□□□ -0.54
COMMD3-204ENST00000456711 ZNF516Q92618 1163 aa11.67□□□□□ -0.54
COMMD3-204ENST00000456711 RIMS1Q86UR5 1692 aaKnown RBP11.65□□□□□ -0.54
COMMD3-204ENST00000456711 ZCCHC11Q5TAX3 1644 aaKnown RBP11.65□□□□□ -0.54
COMMD3-204ENST00000456711 RBM33Q96EV2 1170 aaKnown RBP11.65□□□□□ -0.54
COMMD3-204ENST00000456711 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.65□□□□□ -0.54
COMMD3-204ENST00000456711 TSKSQ9UJT2 592 aa11.65□□□□□ -0.54
COMMD3-204ENST00000456711 UACAQ9BZF9 1416 aa11.65□□□□□ -0.54
COMMD3-204ENST00000456711 CFAP43Q8NDM7 1665 aa11.65□□□□□ -0.55
COMMD3-204ENST00000456711 CD109Q6YHK3 1445 aa11.64□□□□□ -0.55
COMMD3-204ENST00000456711 IL21Q9HBE4 155 aa11.63□□□□□ -0.55
COMMD3-204ENST00000456711 ARAP3Q8WWN8 1544 aa11.63□□□□□ -0.55
COMMD3-204ENST00000456711 CARMIL2Q6F5E8 1435 aa11.62□□□□□ -0.55
COMMD3-204ENST00000456711 EPAS1Q99814 870 aa11.62□□□□□ -0.55
COMMD3-204ENST00000456711 WDR7Q9Y4E6 1490 aa11.62□□□□□ -0.55
COMMD3-204ENST00000456711 POTECB2RU33 542 aa11.61□□□□□ -0.55
COMMD3-204ENST00000456711 SAMD7Q7Z3H4 446 aa11.61□□□□□ -0.55
COMMD3-204ENST00000456711 NKX2-3Q8TAU0 364 aa11.61□□□□□ -0.55
COMMD3-204ENST00000456711 RYDENQ9NUL5 291 aaKnown RBP11.61□□□□□ -0.55
COMMD3-204ENST00000456711 BIVM-ERCC5R4GMW8 1640 aa11.6□□□□□ -0.55
COMMD3-204ENST00000456711 ARID4BQ4LE39 1312 aaPredicted RBP11.6□□□□□ -0.55
COMMD3-204ENST00000456711 IQSEC2Q5JU85 1478 aa11.59□□□□□ -0.55
COMMD3-204ENST00000456711 SMAPO00193 183 aa11.59□□□□□ -0.55
COMMD3-204ENST00000456711 YEATS2Q9ULM3 1422 aa11.59□□□□□ -0.55
COMMD3-204ENST00000456711 STRCQ7RTU9 1775 aa11.57□□□□□ -0.56
COMMD3-204ENST00000456711 TRIM67Q6ZTA4 783 aa11.57□□□□□ -0.56
COMMD3-204ENST00000456711 C3orf80F5H4A9 247 aa11.56□□□□□ -0.56
COMMD3-204ENST00000456711 PACS2Q86VP3 889 aa11.56□□□□□ -0.56
COMMD3-204ENST00000456711 TSR1Q2NL82 804 aaKnown RBP11.55□□□□□ -0.56
COMMD3-204ENST00000456711 MED1Q15648 1581 aaPredicted RBP11.54□□□□□ -0.56
COMMD3-204ENST00000456711 DDX12PQ92771 950 aa11.54□□□□□ -0.56
COMMD3-204ENST00000456711 LTBP4Q8N2S1 1624 aa11.53□□□□□ -0.56
COMMD3-204ENST00000456711 GTPBP6O43824 516 aaPredicted RBP11.53□□□□□ -0.56
COMMD3-204ENST00000456711 MYT1Q01538 1121 aa11.53□□□□□ -0.56
COMMD3-204ENST00000456711 FAM198AQ9UFP1 575 aa11.53□□□□□ -0.56
COMMD3-204ENST00000456711 APLP1P51693 650 aa11.52□□□□□ -0.57
COMMD3-204ENST00000456711 PREX1Q8TCU6 1659 aa11.52□□□□□ -0.57
COMMD3-204ENST00000456711 DPYSL4O14531 572 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms