RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 CFAP44Q96MT7 982 aa7.28□□□□□ -1.24
LINC02540-201ENST00000455554 TMUB1Q9BVT8 246 aa7.28□□□□□ -1.24
LINC02540-201ENST00000455554 LIAT1Q6ZQX7 453 aa7.27□□□□□ -1.25
LINC02540-201ENST00000455554 PRR14Q9BWN1 585 aa7.27□□□□□ -1.25
LINC02540-201ENST00000455554 SLC19A1P41440 591 aa7.26□□□□□ -1.25
LINC02540-201ENST00000455554 MYT1Q01538 1121 aa7.26□□□□□ -1.25
LINC02540-201ENST00000455554 PCDHB3Q9Y5E6 796 aa7.26□□□□□ -1.25
LINC02540-201ENST00000455554 S1PR4O95977 384 aa7.25□□□□□ -1.25
LINC02540-201ENST00000455554 PLA2G2CQ5R387 149 aa7.25□□□□□ -1.25
LINC02540-201ENST00000455554 SPRYD7Q5W111 196 aa7.25□□□□□ -1.25
LINC02540-201ENST00000455554 TNFRSF10AO00220 468 aa7.22□□□□□ -1.25
LINC02540-201ENST00000455554 SLC10A3P09131 477 aa7.22□□□□□ -1.25
LINC02540-201ENST00000455554 ADGRG1Q9Y653 693 aa7.22□□□□□ -1.25
LINC02540-201ENST00000455554 GDF9O60383 454 aa7.21□□□□□ -1.26
LINC02540-201ENST00000455554 DNAJB2P25686 324 aa7.21□□□□□ -1.26
LINC02540-201ENST00000455554 PTGDRQ13258 359 aa7.21□□□□□ -1.26
LINC02540-201ENST00000455554 ST8SIA5O15466 376 aa7.2□□□□□ -1.26
LINC02540-201ENST00000455554 ZNF598Q86UK7 904 aaKnown RBP7.2□□□□□ -1.26
LINC02540-201ENST00000455554 TMEM134Q9H6X4 195 aa7.2□□□□□ -1.26
LINC02540-201ENST00000455554 RCCD1A6NED2 376 aa7.19□□□□□ -1.26
LINC02540-201ENST00000455554 ACTN4O43707 911 aaKnown RBP7.19□□□□□ -1.26
LINC02540-201ENST00000455554 CFHP08603 1231 aa7.19□□□□□ -1.26
LINC02540-201ENST00000455554 PKDCCQ504Y2 493 aa7.19□□□□□ -1.26
LINC02540-201ENST00000455554 ZNF697Q5TEC3 545 aa7.19□□□□□ -1.26
LINC02540-201ENST00000455554 ANKLE1Q8NAG6 615 aa7.19□□□□□ -1.26
LINC02540-201ENST00000455554 RBM46Q8TBY0 533 aaKnown RBP7.19□□□□□ -1.26
LINC02540-201ENST00000455554 PRR20EP86478 221 aa7.18□□□□□ -1.26
LINC02540-201ENST00000455554 PRR20CP86479 221 aa7.18□□□□□ -1.26
LINC02540-201ENST00000455554 PRR20DP86480 221 aa7.18□□□□□ -1.26
LINC02540-201ENST00000455554 PRR20BP86481 221 aa7.18□□□□□ -1.26
LINC02540-201ENST00000455554 PRR20AP86496 221 aa7.18□□□□□ -1.26
LINC02540-201ENST00000455554 KMT5BQ4FZB7 885 aa7.18□□□□□ -1.26
LINC02540-201ENST00000455554 KCNV2Q8TDN2 545 aa7.18□□□□□ -1.26
LINC02540-201ENST00000455554 ARHGEF1Q92888 912 aaKnown RBP7.18□□□□□ -1.26
LINC02540-201ENST00000455554 FAM187AA6NFU0 413 aa7.17□□□□□ -1.26
LINC02540-201ENST00000455554 DGAT1O75907 488 aa7.17□□□□□ -1.26
LINC02540-201ENST00000455554 AMER1Q5JTC6 1135 aaPredicted RBP7.17□□□□□ -1.26
LINC02540-201ENST00000455554 LCE2AQ5TA79 106 aaPredicted RBP7.17□□□□□ -1.26
LINC02540-201ENST00000455554 DACH1Q9UI36 760 aa7.17□□□□□ -1.26
LINC02540-201ENST00000455554 PUS10Q3MIT2 529 aaKnown RBP7.16□□□□□ -1.26
LINC02540-201ENST00000455554 ADH1BP00325 375 aa7.15□□□□□ -1.26
LINC02540-201ENST00000455554 AAASQ9NRG9 546 aa7.15□□□□□ -1.26
LINC02540-201ENST00000455554 PKD2L1Q9P0L9 805 aa7.15□□□□□ -1.26
LINC02540-201ENST00000455554 TSHZ2Q9NRE2 1034 aa7.14□□□□□ -1.27
LINC02540-201ENST00000455554 NUTM2FA1L443 756 aa7.13□□□□□ -1.27
LINC02540-201ENST00000455554 NR1I2O75469 434 aa7.12□□□□□ -1.27
LINC02540-201ENST00000455554 SCUBE3Q8IX30 993 aa7.12□□□□□ -1.27
LINC02540-201ENST00000455554 SLC6A16Q9GZN6 736 aa7.12□□□□□ -1.27
LINC02540-201ENST00000455554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.11□□□□□ -1.27
LINC02540-201ENST00000455554 FOXC1Q12948 553 aa7.11□□□□□ -1.27
LINC02540-201ENST00000455554 RTN4Q9NQC3 1192 aaKnown RBP7.11□□□□□ -1.27
LINC02540-201ENST00000455554 PXYLP1Q8TE99 480 aa7.1□□□□□ -1.27
LINC02540-201ENST00000455554 NLRP7Q8WX94 980 aa7.1□□□□□ -1.27
LINC02540-201ENST00000455554 FCHSD2O94868 740 aa7.09□□□□□ -1.27
LINC02540-201ENST00000455554 FECHP22830 423 aa7.09□□□□□ -1.27
LINC02540-201ENST00000455554 SEMA3EO15041 775 aa7.08□□□□□ -1.28
LINC02540-201ENST00000455554 LCE2CQ5TA81 110 aa7.08□□□□□ -1.28
LINC02540-201ENST00000455554 TREML4Q6UXN2 200 aa7.08□□□□□ -1.28
LINC02540-201ENST00000455554 PRDM9Q9NQV7 894 aa7.08□□□□□ -1.28
LINC02540-201ENST00000455554 OATP04181 439 aa7.07□□□□□ -1.28
LINC02540-201ENST00000455554 RSPH4AQ5TD94 716 aa7.07□□□□□ -1.28
LINC02540-201ENST00000455554 FAM160A2Q8N612 972 aaPredicted RBP7.07□□□□□ -1.28
LINC02540-201ENST00000455554 SPSB2Q99619 263 aa7.07□□□□□ -1.28
LINC02540-201ENST00000455554 GMPR2Q9P2T1 348 aaKnown RBP7.07□□□□□ -1.28
LINC02540-201ENST00000455554 THAP11Q96EK4 314 aa7.06□□□□□ -1.28
LINC02540-201ENST00000455554 TOR4AQ9NXH8 423 aa7.06□□□□□ -1.28
LINC02540-201ENST00000455554 METTL3Q86U44 580 aaKnown RBP7.05□□□□□ -1.28
LINC02540-201ENST00000455554 FCF1Q9Y324 198 aaKnown RBP7.05□□□□□ -1.28
LINC02540-201ENST00000455554 MORN1Q5T089 497 aa7.04□□□□□ -1.28
LINC02540-201ENST00000455554 LMOD2Q6P5Q4 547 aa7.04□□□□□ -1.28
LINC02540-201ENST00000455554 P3H3Q8IVL6 736 aa7.04□□□□□ -1.28
LINC02540-201ENST00000455554 FUT2Q10981 343 aa7.03□□□□□ -1.28
LINC02540-201ENST00000455554 RBM26Q5T8P6 1007 aaKnown RBP7.03□□□□□ -1.28
LINC02540-201ENST00000455554 PHOX2BQ99453 314 aa7.03□□□□□ -1.28
LINC02540-201ENST00000455554 GPR37O15354 613 aa7.02□□□□□ -1.29
LINC02540-201ENST00000455554 AVPP01185 164 aa7.02□□□□□ -1.29
LINC02540-201ENST00000455554 HIC1Q14526 733 aa7.02□□□□□ -1.29
LINC02540-201ENST00000455554 CRIPAKQ8N1N5 446 aa7.02□□□□□ -1.29
LINC02540-201ENST00000455554 SLC27A5Q9Y2P5 690 aa7.02□□□□□ -1.29
LINC02540-201ENST00000455554 RPIAP49247 311 aa7.01□□□□□ -1.29
LINC02540-201ENST00000455554 RNF19BQ6ZMZ0 732 aa7.01□□□□□ -1.29
LINC02540-201ENST00000455554 NFX1Q12986 1120 aaKnown RBP7□□□□□ -1.29
LINC02540-201ENST00000455554 RDH13Q8NBN7 331 aa7□□□□□ -1.29
LINC02540-201ENST00000455554 DDX11L8A8MPP1 907 aa6.99□□□□□ -1.29
LINC02540-201ENST00000455554 CD2BP2O95400 341 aaKnown RBP6.99□□□□□ -1.29
LINC02540-201ENST00000455554 DAXXQ9UER7 740 aaPredicted RBP6.99□□□□□ -1.29
LINC02540-201ENST00000455554 AXIN1O15169 862 aa6.98□□□□□ -1.29
LINC02540-201ENST00000455554 SNRPBP14678 240 aaKnown RBP6.98□□□□□ -1.29
LINC02540-201ENST00000455554 C11orf95C9JLR9 678 aaPredicted RBP6.97□□□□□ -1.29
LINC02540-201ENST00000455554 WFS1O76024 890 aa6.97□□□□□ -1.29
LINC02540-201ENST00000455554 FMNL1O95466 1100 aaPredicted RBP6.97□□□□□ -1.29
LINC02540-201ENST00000455554 SMPD1P17405 629 aa6.97□□□□□ -1.29
LINC02540-201ENST00000455554 ATP6V1AP38606 617 aa6.97□□□□□ -1.29
LINC02540-201ENST00000455554 BRICD5Q6PL45 260 aa6.97□□□□□ -1.29
LINC02540-201ENST00000455554 CYP4X1Q8N118 509 aa6.97□□□□□ -1.29
LINC02540-201ENST00000455554 GNPATO15228 680 aa6.96□□□□□ -1.3
LINC02540-201ENST00000455554 GCGRP47871 477 aa6.96□□□□□ -1.3
LINC02540-201ENST00000455554 J3QL48 77 aa6.95□□□□□ -1.3
LINC02540-201ENST00000455554 CTC1Q2NKJ3 1217 aa6.95□□□□□ -1.3
LINC02540-201ENST00000455554 SALL2Q9Y467 1007 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms