RNA–Protein interactions for RNA: ENST00000454108.5

CALD1-212, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-212ENST00000454108 TMEM131LA2VDJ0 1609 aa24.23■■□□□ 1.47
CALD1-212ENST00000454108 E9PCH4 1651 aa24.23■■□□□ 1.47
CALD1-212ENST00000454108 KCNA6P17658 529 aa24.22■■□□□ 1.47
CALD1-212ENST00000454108 IQGAP3Q86VI3 1631 aa24.21■■□□□ 1.47
CALD1-212ENST00000454108 ZFYVE9O95405 1425 aa24.21■■□□□ 1.47
CALD1-212ENST00000454108 ROCK1Q13464 1354 aa24.2■■□□□ 1.46
CALD1-212ENST00000454108 BCANQ96GW7 911 aa24.2■■□□□ 1.46
CALD1-212ENST00000454108 ROBO1Q9Y6N7 1651 aa24.18■■□□□ 1.46
CALD1-212ENST00000454108 CHD2O14647 1828 aaKnown RBP24.18■■□□□ 1.46
CALD1-212ENST00000454108 RIMS2Q9UQ26 1411 aa24.18■■□□□ 1.46
CALD1-212ENST00000454108 PROSER2Q86WR7 435 aaPredicted RBP24.17■■□□□ 1.46
CALD1-212ENST00000454108 FAM135BQ49AJ0 1406 aa24.17■■□□□ 1.46
CALD1-212ENST00000454108 PLEKHG1Q9ULL1 1385 aa24.16■■□□□ 1.46
CALD1-212ENST00000454108 PPP1R15AO75807 674 aaPredicted RBP24.15■■□□□ 1.46
CALD1-212ENST00000454108 RBM33Q96EV2 1170 aaKnown RBP24.13■■□□□ 1.45
CALD1-212ENST00000454108 HDGFP51858 240 aaKnown RBP24.12■■□□□ 1.45
CALD1-212ENST00000454108 MSH6P52701 1360 aa24.11■■□□□ 1.45
CALD1-212ENST00000454108 CHGAP10645 457 aaKnown RBP24.1■■□□□ 1.45
CALD1-212ENST00000454108 DIP2AQ14689 1571 aa24.1■■□□□ 1.45
CALD1-212ENST00000454108 ITGAEP38570 1179 aa24.08■■□□□ 1.45
CALD1-212ENST00000454108 NUP155O75694 1391 aa24.07■■□□□ 1.44
CALD1-212ENST00000454108 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.07■■□□□ 1.44
CALD1-212ENST00000454108 PHLPP1O60346 1717 aa24.06■■□□□ 1.44
CALD1-212ENST00000454108 SPHKAPQ2M3C7 1700 aa24.06■■□□□ 1.44
CALD1-212ENST00000454108 ADAMTS13Q76LX8 1427 aa24.03■■□□□ 1.44
CALD1-212ENST00000454108 TBX22Q9Y458 520 aa24.03■■□□□ 1.44
CALD1-212ENST00000454108 NUTM2DQ5VT03 806 aaPredicted RBP24.02■■□□□ 1.44
CALD1-212ENST00000454108 TRPM2O94759 1503 aa24.01■■□□□ 1.43
CALD1-212ENST00000454108 PPARGC1BQ86YN6 1023 aaKnown RBP24.01■■□□□ 1.43
CALD1-212ENST00000454108 NCOA3Q9Y6Q9 1424 aa24■■□□□ 1.43
CALD1-212ENST00000454108 SLAIN2Q9P270 581 aa23.99■■□□□ 1.43
CALD1-212ENST00000454108 PIK3R4Q99570 1358 aa23.99■■□□□ 1.43
CALD1-212ENST00000454108 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.98■■□□□ 1.43
CALD1-212ENST00000454108 RGS17Q9UGC6 210 aaPredicted RBP23.97■■□□□ 1.43
CALD1-212ENST00000454108 C14orf37Q86TY3 774 aa23.96■■□□□ 1.43
CALD1-212ENST00000454108 COL16A1Q07092 1604 aaPredicted RBP23.95■■□□□ 1.43
CALD1-212ENST00000454108 NRXN3Q9Y4C0 1643 aa23.95■■□□□ 1.42
CALD1-212ENST00000454108 SETBP1Q9Y6X0 1596 aa23.93■■□□□ 1.42
CALD1-212ENST00000454108 XRN1Q8IZH2 1706 aaKnown RBP23.92■■□□□ 1.42
CALD1-212ENST00000454108 JCADQ9P266 1359 aa23.91■■□□□ 1.42
CALD1-212ENST00000454108 CLTCL1P53675 1640 aa23.91■■□□□ 1.42
CALD1-212ENST00000454108 PTPRUQ92729 1446 aa23.9■■□□□ 1.42
CALD1-212ENST00000454108 RRBP1Q9P2E9 1410 aaKnown RBP23.9■■□□□ 1.42
CALD1-212ENST00000454108 KIF1BO60333 1816 aa23.89■■□□□ 1.42
CALD1-212ENST00000454108 CADPS2Q86UW7 1296 aa23.89■■□□□ 1.41
CALD1-212ENST00000454108 AHDC1Q5TGY3 1603 aaPredicted RBP23.88■■□□□ 1.41
CALD1-212ENST00000454108 ATF3P18847 181 aa23.88■■□□□ 1.41
CALD1-212ENST00000454108 C19orf44Q9H6X5 657 aa23.88■■□□□ 1.41
CALD1-212ENST00000454108 ZNF326Q5BKZ1 582 aaKnown RBP23.87■■□□□ 1.41
CALD1-212ENST00000454108 AMOTL2Q9Y2J4 779 aa23.87■■□□□ 1.41
CALD1-212ENST00000454108 NEXMIFQ5QGS0 1516 aa23.85■■□□□ 1.41
CALD1-212ENST00000454108 SHPRHQ149N8 1683 aa23.85■■□□□ 1.41
CALD1-212ENST00000454108 DCCP43146 1447 aa23.84■■□□□ 1.41
CALD1-212ENST00000454108 NAIPQ13075 1403 aa23.84■■□□□ 1.41
CALD1-212ENST00000454108 POTEAQ6S8J7 498 aa23.84■■□□□ 1.41
CALD1-212ENST00000454108 LRP6O75581 1613 aa23.8■■□□□ 1.4
CALD1-212ENST00000454108 METP08581 1390 aa23.79■■□□□ 1.4
CALD1-212ENST00000454108 SETD1AO15047 1707 aaKnown RBP23.79■■□□□ 1.4
CALD1-212ENST00000454108 SPATA31A6Q5VVP1 1343 aa23.79■■□□□ 1.4
CALD1-212ENST00000454108 NALCNQ8IZF0 1738 aa23.78■■□□□ 1.4
CALD1-212ENST00000454108 ASXL1Q8IXJ9 1541 aa23.78■■□□□ 1.4
CALD1-212ENST00000454108 NHSL1Q5SYE7 1610 aa23.77■■□□□ 1.4
CALD1-212ENST00000454108 BRINP3Q76B58 766 aa23.76■■□□□ 1.39
CALD1-212ENST00000454108 HFM1A2PYH4 1435 aa23.76■■□□□ 1.39
CALD1-212ENST00000454108 MST1RQ04912 1400 aa23.75■■□□□ 1.39
CALD1-212ENST00000454108 MEX3CQ5U5Q3 659 aaKnown RBP23.74■■□□□ 1.39
CALD1-212ENST00000454108 ADGRL3Q9HAR2 1447 aa23.74■■□□□ 1.39
CALD1-212ENST00000454108 TRIM52Q96A61 297 aa23.72■■□□□ 1.39
CALD1-212ENST00000454108 PPLO60437 1756 aa23.7■■□□□ 1.39
CALD1-212ENST00000454108 PTCH1Q13635 1447 aa23.67■■□□□ 1.38
CALD1-212ENST00000454108 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
CALD1-212ENST00000454108 ZNF772Q68DY9 489 aaPredicted RBP23.66■■□□□ 1.38
CALD1-212ENST00000454108 SLC4A1APQ9BWU0 796 aaKnown RBP23.66■■□□□ 1.38
CALD1-212ENST00000454108 VGFO15240 615 aaPredicted RBP23.65■■□□□ 1.38
CALD1-212ENST00000454108 NUTM2BA6NNL0 878 aaPredicted RBP23.63■■□□□ 1.37
CALD1-212ENST00000454108 NUTM2EB1AL46 878 aaPredicted RBP23.63■■□□□ 1.37
CALD1-212ENST00000454108 NUTM2AQ8IVF1 878 aaPredicted RBP23.63■■□□□ 1.37
CALD1-212ENST00000454108 RPGRIP1LQ68CZ1 1315 aa23.62■■□□□ 1.37
CALD1-212ENST00000454108 PRAG1Q86YV5 1406 aa23.61■■□□□ 1.37
CALD1-212ENST00000454108 LAMC1P11047 1609 aa23.6■■□□□ 1.37
CALD1-212ENST00000454108 ROBO2Q9HCK4 1378 aa23.6■■□□□ 1.37
CALD1-212ENST00000454108 C1orf167Q5SNV9 1468 aa23.6■■□□□ 1.37
CALD1-212ENST00000454108 LRRC59Q96AG4 307 aaKnown RBP23.59■■□□□ 1.37
CALD1-212ENST00000454108 DDX17Q92841 729 aaKnown RBP23.57■■□□□ 1.36
CALD1-212ENST00000454108 IFT172Q9UG01 1749 aa23.56■■□□□ 1.36
CALD1-212ENST00000454108 PNPLA6Q8IY17 1366 aa23.56■■□□□ 1.36
CALD1-212ENST00000454108 CCDC144AA2RUR9 1427 aa23.55■■□□□ 1.36
CALD1-212ENST00000454108 AFF2P51816 1311 aa23.55■■□□□ 1.36
CALD1-212ENST00000454108 RXRBP28702 533 aa23.53■■□□□ 1.36
CALD1-212ENST00000454108 FOXD1Q16676 465 aa23.53■■□□□ 1.36
CALD1-212ENST00000454108 CDC42BPGQ6DT37 1551 aa23.52■■□□□ 1.36
CALD1-212ENST00000454108 CDK12Q9NYV4 1490 aaPredicted RBP23.52■■□□□ 1.36
CALD1-212ENST00000454108 C8orf37Q96NL8 207 aa23.49■■□□□ 1.35
CALD1-212ENST00000454108 KNDC1Q76NI1 1749 aa23.48■■□□□ 1.35
CALD1-212ENST00000454108 ORAI2Q96SN7 254 aa23.48■■□□□ 1.35
CALD1-212ENST00000454108 SPATA31E1Q6ZUB1 1445 aa23.48■■□□□ 1.35
CALD1-212ENST00000454108 SOS2Q07890 1332 aaPredicted RBP23.46■■□□□ 1.35
CALD1-212ENST00000454108 ADGRF5Q8IZF2 1346 aa23.46■■□□□ 1.35
CALD1-212ENST00000454108 COL22A1Q8NFW1 1626 aaPredicted RBP23.46■■□□□ 1.35
CALD1-212ENST00000454108 ANKRD30BQ9BXX2 1392 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms