RNA–Protein interactions for RNA: ENST00000453121.1

NEGR1-IT1-201, NEGR1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene NEGR1-IT1, Length 534 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEGR1-IT1-201ENST00000453121 PLA2G2EQ9NZK7 142 aa9.13□□□□□ -0.95
NEGR1-IT1-201ENST00000453121 NLRP7Q8WX94 980 aa9.12□□□□□ -0.95
NEGR1-IT1-201ENST00000453121 DNAJB2P25686 324 aa9.11□□□□□ -0.95
NEGR1-IT1-201ENST00000453121 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.1□□□□□ -0.95
NEGR1-IT1-201ENST00000453121 SAMD7Q7Z3H4 446 aa9.1□□□□□ -0.95
NEGR1-IT1-201ENST00000453121 WBP1LQ9NX94 342 aa9.1□□□□□ -0.95
NEGR1-IT1-201ENST00000453121 TMEM134Q9H6X4 195 aa9.09□□□□□ -0.95
NEGR1-IT1-201ENST00000453121 TSR3Q9UJK0 312 aaKnown RBP9.09□□□□□ -0.95
NEGR1-IT1-201ENST00000453121 HPS5Q9UPZ3 1129 aa9.09□□□□□ -0.95
NEGR1-IT1-201ENST00000453121 AMHR2Q16671 573 aa9.08□□□□□ -0.96
NEGR1-IT1-201ENST00000453121 SWT1Q5T5J6 900 aaKnown RBP9.08□□□□□ -0.96
NEGR1-IT1-201ENST00000453121 NYAP1Q6ZVC0 841 aa9.08□□□□□ -0.96
NEGR1-IT1-201ENST00000453121 HDGFP51858 240 aaKnown RBP9.07□□□□□ -0.96
NEGR1-IT1-201ENST00000453121 MDM2Q00987 491 aaPredicted RBP9.07□□□□□ -0.96
NEGR1-IT1-201ENST00000453121 PDE4DQ08499 809 aa9.06□□□□□ -0.96
NEGR1-IT1-201ENST00000453121 TMUB1Q9BVT8 246 aa9.06□□□□□ -0.96
NEGR1-IT1-201ENST00000453121 REPIN1Q9BWE0 567 aaKnown RBP9.06□□□□□ -0.96
NEGR1-IT1-201ENST00000453121 DAXXQ9UER7 740 aaPredicted RBP9.06□□□□□ -0.96
NEGR1-IT1-201ENST00000453121 PPP4CP60510 307 aa9.05□□□□□ -0.96
NEGR1-IT1-201ENST00000453121 CLCN1P35523 988 aa9.04□□□□□ -0.96
NEGR1-IT1-201ENST00000453121 TTLL12Q14166 644 aaPredicted RBP9.03□□□□□ -0.96
NEGR1-IT1-201ENST00000453121 IFFO2Q5TF58 517 aa9.03□□□□□ -0.96
NEGR1-IT1-201ENST00000453121 PARP9Q8IXQ6 854 aa9.03□□□□□ -0.96
NEGR1-IT1-201ENST00000453121 GPCPD1Q9NPB8 672 aa9.03□□□□□ -0.96
NEGR1-IT1-201ENST00000453121 RNF40O75150 1001 aa9.02□□□□□ -0.97
NEGR1-IT1-201ENST00000453121 ITGBL1O95965 494 aaPredicted RBP9.01□□□□□ -0.97
NEGR1-IT1-201ENST00000453121 SLF2Q8IX21 1173 aa9.01□□□□□ -0.97
NEGR1-IT1-201ENST00000453121 SLC10A3P09131 477 aa9□□□□□ -0.97
NEGR1-IT1-201ENST00000453121 GIGYF2Q6Y7W6 1299 aaKnown RBP9□□□□□ -0.97
NEGR1-IT1-201ENST00000453121 DDX11L8A8MPP1 907 aa8.99□□□□□ -0.97
NEGR1-IT1-201ENST00000453121 GPBP1L1Q9HC44 474 aaPredicted RBP8.99□□□□□ -0.97
NEGR1-IT1-201ENST00000453121 FAM217BQ9NTX9 383 aaPredicted RBP8.99□□□□□ -0.97
NEGR1-IT1-201ENST00000453121 SSTR3P32745 418 aaPredicted RBP8.98□□□□□ -0.97
NEGR1-IT1-201ENST00000453121 SLC4A3P48751 1232 aa8.98□□□□□ -0.97
NEGR1-IT1-201ENST00000453121 BRPF1P55201 1214 aaPredicted RBP8.98□□□□□ -0.97
NEGR1-IT1-201ENST00000453121 NECTIN2Q92692 538 aa8.98□□□□□ -0.97
NEGR1-IT1-201ENST00000453121 NEUROD2Q15784 382 aa8.97□□□□□ -0.97
NEGR1-IT1-201ENST00000453121 SULF1Q8IWU6 871 aa8.97□□□□□ -0.97
NEGR1-IT1-201ENST00000453121 CD46P15529 392 aa8.96□□□□□ -0.98
NEGR1-IT1-201ENST00000453121 KDM4CQ9H3R0 1056 aa8.96□□□□□ -0.98
NEGR1-IT1-201ENST00000453121 MS4A1P11836 297 aa8.95□□□□□ -0.98
NEGR1-IT1-201ENST00000453121 APLP1P51693 650 aa8.95□□□□□ -0.98
NEGR1-IT1-201ENST00000453121 KCNC4Q03721 635 aa8.95□□□□□ -0.98
NEGR1-IT1-201ENST00000453121 RDH13Q8NBN7 331 aa8.95□□□□□ -0.98
NEGR1-IT1-201ENST00000453121 RSPH4AQ5TD94 716 aa8.94□□□□□ -0.98
NEGR1-IT1-201ENST00000453121 TJAP1Q5JTD0 557 aa8.93□□□□□ -0.98
NEGR1-IT1-201ENST00000453121 A0A0G2JS52 829 aa8.92□□□□□ -0.98
NEGR1-IT1-201ENST00000453121 CFHP08603 1231 aa8.92□□□□□ -0.98
NEGR1-IT1-201ENST00000453121 GCGRP47871 477 aa8.92□□□□□ -0.98
NEGR1-IT1-201ENST00000453121 MTRQ99707 1265 aa8.91□□□□□ -0.98
NEGR1-IT1-201ENST00000453121 BEGAINQ9BUH8 593 aa8.91□□□□□ -0.98
NEGR1-IT1-201ENST00000453121 PRR14Q9BWN1 585 aa8.9□□□□□ -0.98
NEGR1-IT1-201ENST00000453121 FAM117AQ9C073 453 aa8.9□□□□□ -0.98
NEGR1-IT1-201ENST00000453121 KMT5BQ4FZB7 885 aa8.89□□□□□ -0.99
NEGR1-IT1-201ENST00000453121 IL21Q9HBE4 155 aa8.89□□□□□ -0.99
NEGR1-IT1-201ENST00000453121 ACTN4O43707 911 aaKnown RBP8.88□□□□□ -0.99
NEGR1-IT1-201ENST00000453121 KDM4AO75164 1064 aa8.86□□□□□ -0.99
NEGR1-IT1-201ENST00000453121 SPIRE2Q8WWL2 714 aa8.86□□□□□ -0.99
NEGR1-IT1-201ENST00000453121 ZNF516Q92618 1163 aa8.86□□□□□ -0.99
NEGR1-IT1-201ENST00000453121 PLEKHG3A1L390 1219 aa8.85□□□□□ -0.99
NEGR1-IT1-201ENST00000453121 RGS20O76081 388 aa8.85□□□□□ -0.99
NEGR1-IT1-201ENST00000453121 COPS2P61201 443 aa8.85□□□□□ -0.99
NEGR1-IT1-201ENST00000453121 FUT2Q10981 343 aa8.85□□□□□ -0.99
NEGR1-IT1-201ENST00000453121 NUTM1Q86Y26 1132 aa8.85□□□□□ -0.99
NEGR1-IT1-201ENST00000453121 IL27Q8NEV9 243 aa8.85□□□□□ -0.99
NEGR1-IT1-201ENST00000453121 PCDHB3Q9Y5E6 796 aa8.85□□□□□ -0.99
NEGR1-IT1-201ENST00000453121 DDRGK1Q96HY6 314 aa8.84□□□□□ -0.99
NEGR1-IT1-201ENST00000453121 TBC1D2Q9BYX2 928 aa8.84□□□□□ -0.99
NEGR1-IT1-201ENST00000453121 ATP6V1AP38606 617 aa8.83□□□□□ -1
NEGR1-IT1-201ENST00000453121 PUS10Q3MIT2 529 aaKnown RBP8.83□□□□□ -1
NEGR1-IT1-201ENST00000453121 ZPR1O75312 459 aa8.82□□□□□ -1
NEGR1-IT1-201ENST00000453121 USP46P62068 366 aa8.82□□□□□ -1
NEGR1-IT1-201ENST00000453121 BLOC1S3Q6QNY0 202 aa8.82□□□□□ -1
NEGR1-IT1-201ENST00000453121 HOXA2O43364 376 aa8.81□□□□□ -1
NEGR1-IT1-201ENST00000453121 HLA-CQ95604 372 aa8.81□□□□□ -1
NEGR1-IT1-201ENST00000453121 MOXD2PA6NHM9 499 aa8.8□□□□□ -1
NEGR1-IT1-201ENST00000453121 NDUFV2P19404 249 aa8.8□□□□□ -1
NEGR1-IT1-201ENST00000453121 DIXDC1Q155Q3 683 aa8.8□□□□□ -1
NEGR1-IT1-201ENST00000453121 MORN1Q5T089 497 aa8.8□□□□□ -1
NEGR1-IT1-201ENST00000453121 NKX2-3Q8TAU0 364 aa8.8□□□□□ -1
NEGR1-IT1-201ENST00000453121 GRIPAP1Q4V328 841 aa8.79□□□□□ -1
NEGR1-IT1-201ENST00000453121 MYSM1Q5VVJ2 828 aa8.79□□□□□ -1
NEGR1-IT1-201ENST00000453121 GUCA2AQ02747 115 aa8.78□□□□□ -1
NEGR1-IT1-201ENST00000453121 PPP1R18Q6NYC8 613 aa8.78□□□□□ -1
NEGR1-IT1-201ENST00000453121 SCUBE3Q8IX30 993 aa8.78□□□□□ -1
NEGR1-IT1-201ENST00000453121 RSPH6AQ9H0K4 717 aa8.78□□□□□ -1
NEGR1-IT1-201ENST00000453121 SLC27A5Q9Y2P5 690 aa8.78□□□□□ -1
NEGR1-IT1-201ENST00000453121 SPTLC1O15269 473 aa8.76□□□□□ -1.01
NEGR1-IT1-201ENST00000453121 NR1I2O75469 434 aa8.76□□□□□ -1.01
NEGR1-IT1-201ENST00000453121 FDX1P10109 184 aa8.76□□□□□ -1.01
NEGR1-IT1-201ENST00000453121 SH3D19Q5HYK7 790 aa8.76□□□□□ -1.01
NEGR1-IT1-201ENST00000453121 RSBN1LQ6PCB5 846 aaPredicted RBP8.76□□□□□ -1.01
NEGR1-IT1-201ENST00000453121 RIC3Q7Z5B4 369 aa8.76□□□□□ -1.01
NEGR1-IT1-201ENST00000453121 POLR3EQ9NVU0 708 aa8.76□□□□□ -1.01
NEGR1-IT1-201ENST00000453121 PCDHGC3Q9UN70 934 aa8.76□□□□□ -1.01
NEGR1-IT1-201ENST00000453121 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.75□□□□□ -1.01
NEGR1-IT1-201ENST00000453121 LIMD1Q9UGP4 676 aa8.75□□□□□ -1.01
NEGR1-IT1-201ENST00000453121 TLL1O43897 1013 aa8.74□□□□□ -1.01
NEGR1-IT1-201ENST00000453121 GJA5P36382 358 aa8.74□□□□□ -1.01
NEGR1-IT1-201ENST00000453121 SKIV2LQ15477 1246 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms