RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 TMEM94Q12767 1356 aa13.77□□□□□ -0.21
DEPDC1B-202ENST00000453022 NKTRP30414 1462 aaKnown RBP13.76□□□□□ -0.21
DEPDC1B-202ENST00000453022 ZFYVE9O95405 1425 aa13.76□□□□□ -0.21
DEPDC1B-202ENST00000453022 FAM50AQ14320 339 aaKnown RBP13.75□□□□□ -0.21
DEPDC1B-202ENST00000453022 SLC26A8Q96RN1 970 aa13.75□□□□□ -0.21
DEPDC1B-202ENST00000453022 IQGAP3Q86VI3 1631 aa13.75□□□□□ -0.21
DEPDC1B-202ENST00000453022 FAM135BQ49AJ0 1406 aa13.74□□□□□ -0.21
DEPDC1B-202ENST00000453022 KCNA6P17658 529 aa13.74□□□□□ -0.21
DEPDC1B-202ENST00000453022 SLC52A1Q9NWF4 448 aa13.74□□□□□ -0.21
DEPDC1B-202ENST00000453022 RBM33Q96EV2 1170 aaKnown RBP13.72□□□□□ -0.21
DEPDC1B-202ENST00000453022 RIMS2Q9UQ26 1411 aa13.71□□□□□ -0.21
DEPDC1B-202ENST00000453022 PHLPP1O60346 1717 aa13.71□□□□□ -0.22
DEPDC1B-202ENST00000453022 PLEKHG1Q9ULL1 1385 aa13.71□□□□□ -0.22
DEPDC1B-202ENST00000453022 PROSER2Q86WR7 435 aaPredicted RBP13.7□□□□□ -0.22
DEPDC1B-202ENST00000453022 RGS17Q9UGC6 210 aaPredicted RBP13.7□□□□□ -0.22
DEPDC1B-202ENST00000453022 ROCK1Q13464 1354 aa13.68□□□□□ -0.22
DEPDC1B-202ENST00000453022 DIP2AQ14689 1571 aa13.68□□□□□ -0.22
DEPDC1B-202ENST00000453022 SPHKAPQ2M3C7 1700 aa13.67□□□□□ -0.22
DEPDC1B-202ENST00000453022 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.67□□□□□ -0.22
DEPDC1B-202ENST00000453022 MSH5O43196 834 aa13.66□□□□□ -0.22
DEPDC1B-202ENST00000453022 COL16A1Q07092 1604 aaPredicted RBP13.66□□□□□ -0.22
DEPDC1B-202ENST00000453022 MSH6P52701 1360 aa13.66□□□□□ -0.22
DEPDC1B-202ENST00000453022 ADAMTS13Q76LX8 1427 aa13.66□□□□□ -0.22
DEPDC1B-202ENST00000453022 BCANQ96GW7 911 aa13.66□□□□□ -0.22
DEPDC1B-202ENST00000453022 NRXN3Q9Y4C0 1643 aa13.65□□□□□ -0.22
DEPDC1B-202ENST00000453022 PPP1R15AO75807 674 aaPredicted RBP13.64□□□□□ -0.23
DEPDC1B-202ENST00000453022 SETD1AO15047 1707 aaKnown RBP13.62□□□□□ -0.23
DEPDC1B-202ENST00000453022 TRPM2O94759 1503 aa13.62□□□□□ -0.23
DEPDC1B-202ENST00000453022 XRN1Q8IZH2 1706 aaKnown RBP13.62□□□□□ -0.23
DEPDC1B-202ENST00000453022 TBX22Q9Y458 520 aa13.62□□□□□ -0.23
DEPDC1B-202ENST00000453022 CHGAP10645 457 aaKnown RBP13.62□□□□□ -0.23
DEPDC1B-202ENST00000453022 NUTM2DQ5VT03 806 aaPredicted RBP13.62□□□□□ -0.23
DEPDC1B-202ENST00000453022 PIAS4Q8N2W9 510 aaPredicted RBP13.62□□□□□ -0.23
DEPDC1B-202ENST00000453022 SLAIN2Q9P270 581 aa13.62□□□□□ -0.23
DEPDC1B-202ENST00000453022 NCOA3Q9Y6Q9 1424 aa13.61□□□□□ -0.23
DEPDC1B-202ENST00000453022 NUP155O75694 1391 aa13.61□□□□□ -0.23
DEPDC1B-202ENST00000453022 HDGFP51858 240 aaKnown RBP13.6□□□□□ -0.23
DEPDC1B-202ENST00000453022 POTEAQ6S8J7 498 aa13.6□□□□□ -0.23
DEPDC1B-202ENST00000453022 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.6□□□□□ -0.23
DEPDC1B-202ENST00000453022 SHPRHQ149N8 1683 aa13.6□□□□□ -0.23
DEPDC1B-202ENST00000453022 AHDC1Q5TGY3 1603 aaPredicted RBP13.6□□□□□ -0.23
DEPDC1B-202ENST00000453022 SETBP1Q9Y6X0 1596 aa13.6□□□□□ -0.23
DEPDC1B-202ENST00000453022 PTPRUQ92729 1446 aa13.6□□□□□ -0.23
DEPDC1B-202ENST00000453022 PIK3R4Q99570 1358 aa13.59□□□□□ -0.23
DEPDC1B-202ENST00000453022 CLTCL1P53675 1640 aa13.59□□□□□ -0.23
DEPDC1B-202ENST00000453022 ADRA2BP18089 450 aa13.58□□□□□ -0.23
DEPDC1B-202ENST00000453022 LRP6O75581 1613 aa13.58□□□□□ -0.24
DEPDC1B-202ENST00000453022 JCADQ9P266 1359 aa13.58□□□□□ -0.24
DEPDC1B-202ENST00000453022 ITGAEP38570 1179 aa13.58□□□□□ -0.24
DEPDC1B-202ENST00000453022 KIF1BO60333 1816 aa13.56□□□□□ -0.24
DEPDC1B-202ENST00000453022 PPARGC1BQ86YN6 1023 aaKnown RBP13.56□□□□□ -0.24
DEPDC1B-202ENST00000453022 NALCNQ8IZF0 1738 aa13.56□□□□□ -0.24
DEPDC1B-202ENST00000453022 NHSL1Q5SYE7 1610 aa13.55□□□□□ -0.24
DEPDC1B-202ENST00000453022 NEXMIFQ5QGS0 1516 aa13.55□□□□□ -0.24
DEPDC1B-202ENST00000453022 C14orf37Q86TY3 774 aa13.54□□□□□ -0.24
DEPDC1B-202ENST00000453022 C19orf44Q9H6X5 657 aa13.54□□□□□ -0.24
DEPDC1B-202ENST00000453022 AMOTL2Q9Y2J4 779 aa13.54□□□□□ -0.24
DEPDC1B-202ENST00000453022 DCCP43146 1447 aa13.53□□□□□ -0.24
DEPDC1B-202ENST00000453022 CADPS2Q86UW7 1296 aa13.53□□□□□ -0.24
DEPDC1B-202ENST00000453022 ASXL1Q8IXJ9 1541 aa13.52□□□□□ -0.24
DEPDC1B-202ENST00000453022 METP08581 1390 aa13.51□□□□□ -0.25
DEPDC1B-202ENST00000453022 ATF3P18847 181 aa13.51□□□□□ -0.25
DEPDC1B-202ENST00000453022 RRBP1Q9P2E9 1410 aaKnown RBP13.51□□□□□ -0.25
DEPDC1B-202ENST00000453022 MST1RQ04912 1400 aa13.5□□□□□ -0.25
DEPDC1B-202ENST00000453022 NAIPQ13075 1403 aa13.5□□□□□ -0.25
DEPDC1B-202ENST00000453022 SPATA31A6Q5VVP1 1343 aa13.5□□□□□ -0.25
DEPDC1B-202ENST00000453022 BRINP3Q76B58 766 aa13.49□□□□□ -0.25
DEPDC1B-202ENST00000453022 PPLO60437 1756 aa13.48□□□□□ -0.25
DEPDC1B-202ENST00000453022 ADGRL3Q9HAR2 1447 aa13.48□□□□□ -0.25
DEPDC1B-202ENST00000453022 ZNF326Q5BKZ1 582 aaKnown RBP13.48□□□□□ -0.25
DEPDC1B-202ENST00000453022 LAMC1P11047 1609 aa13.46□□□□□ -0.25
DEPDC1B-202ENST00000453022 SETD5Q9C0A6 1442 aa13.46□□□□□ -0.26
DEPDC1B-202ENST00000453022 MEX3CQ5U5Q3 659 aaKnown RBP13.44□□□□□ -0.26
DEPDC1B-202ENST00000453022 HFM1A2PYH4 1435 aa13.43□□□□□ -0.26
DEPDC1B-202ENST00000453022 PTCH1Q13635 1447 aa13.43□□□□□ -0.26
DEPDC1B-202ENST00000453022 ZNF772Q68DY9 489 aaPredicted RBP13.42□□□□□ -0.26
DEPDC1B-202ENST00000453022 IFT172Q9UG01 1749 aa13.41□□□□□ -0.26
DEPDC1B-202ENST00000453022 PRAG1Q86YV5 1406 aa13.41□□□□□ -0.26
DEPDC1B-202ENST00000453022 DDX17Q92841 729 aaKnown RBP13.41□□□□□ -0.26
DEPDC1B-202ENST00000453022 C1orf167Q5SNV9 1468 aa13.4□□□□□ -0.26
DEPDC1B-202ENST00000453022 PNPLA6Q8IY17 1366 aa13.4□□□□□ -0.26
DEPDC1B-202ENST00000453022 ROBO2Q9HCK4 1378 aa13.4□□□□□ -0.26
DEPDC1B-202ENST00000453022 NUTM2BA6NNL0 878 aaPredicted RBP13.4□□□□□ -0.26
DEPDC1B-202ENST00000453022 NUTM2EB1AL46 878 aaPredicted RBP13.4□□□□□ -0.26
DEPDC1B-202ENST00000453022 NUTM2AQ8IVF1 878 aaPredicted RBP13.4□□□□□ -0.26
DEPDC1B-202ENST00000453022 CDK12Q9NYV4 1490 aaPredicted RBP13.39□□□□□ -0.27
DEPDC1B-202ENST00000453022 TRIM52Q96A61 297 aa13.39□□□□□ -0.27
DEPDC1B-202ENST00000453022 AFF2P51816 1311 aa13.38□□□□□ -0.27
DEPDC1B-202ENST00000453022 COL22A1Q8NFW1 1626 aaPredicted RBP13.37□□□□□ -0.27
DEPDC1B-202ENST00000453022 LRRC59Q96AG4 307 aaKnown RBP13.37□□□□□ -0.27
DEPDC1B-202ENST00000453022 CDC42BPGQ6DT37 1551 aa13.36□□□□□ -0.27
DEPDC1B-202ENST00000453022 VGFO15240 615 aaPredicted RBP13.36□□□□□ -0.27
DEPDC1B-202ENST00000453022 UPF1Q92900 1129 aaKnown RBP eCLIP13.36□□□□□ -0.27
DEPDC1B-202ENST00000453022 KNDC1Q76NI1 1749 aa13.36□□□□□ -0.27
DEPDC1B-202ENST00000453022 RGS12O14924 1447 aa13.35□□□□□ -0.27
DEPDC1B-202ENST00000453022 RXRBP28702 533 aa13.35□□□□□ -0.27
DEPDC1B-202ENST00000453022 SLC4A1APQ9BWU0 796 aaKnown RBP13.35□□□□□ -0.27
DEPDC1B-202ENST00000453022 MARF1Q9Y4F3 1742 aaKnown RBP13.35□□□□□ -0.27
DEPDC1B-202ENST00000453022 EP400Q96L91 3159 aa13.34□□□□□ -0.27
DEPDC1B-202ENST00000453022 RPGRIP1LQ68CZ1 1315 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms