RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 SLC4A3P48751 1232 aa10.56□□□□□ -0.72
GTF3C3-207ENST00000451088 LMOD2Q6P5Q4 547 aa10.56□□□□□ -0.72
GTF3C3-207ENST00000451088 SLC24A1O60721 1099 aa10.55□□□□□ -0.72
GTF3C3-207ENST00000451088 MAP2K5Q13163 448 aa10.55□□□□□ -0.72
GTF3C3-207ENST00000451088 APLP1P51693 650 aa10.54□□□□□ -0.72
GTF3C3-207ENST00000451088 PHOX2BQ99453 314 aa10.52□□□□□ -0.73
GTF3C3-207ENST00000451088 TJAP1Q5JTD0 557 aa10.51□□□□□ -0.73
GTF3C3-207ENST00000451088 IRF6O14896 467 aa10.5□□□□□ -0.73
GTF3C3-207ENST00000451088 KCNC4Q03721 635 aa10.5□□□□□ -0.73
GTF3C3-207ENST00000451088 MINK1Q8N4C8 1332 aaPredicted RBP10.5□□□□□ -0.73
GTF3C3-207ENST00000451088 SLC10A3P09131 477 aa10.49□□□□□ -0.73
GTF3C3-207ENST00000451088 PRR14Q9BWN1 585 aa10.49□□□□□ -0.73
GTF3C3-207ENST00000451088 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
GTF3C3-207ENST00000451088 A0A0G2JS52 829 aa10.48□□□□□ -0.73
GTF3C3-207ENST00000451088 MTRQ99707 1265 aa10.48□□□□□ -0.73
GTF3C3-207ENST00000451088 ZMYND10O75800 440 aa10.46□□□□□ -0.73
GTF3C3-207ENST00000451088 ZC3H15Q8WU90 426 aaKnown RBP10.46□□□□□ -0.73
GTF3C3-207ENST00000451088 NLRP7Q8WX94 980 aa10.46□□□□□ -0.73
GTF3C3-207ENST00000451088 IL21Q9HBE4 155 aa10.46□□□□□ -0.73
GTF3C3-207ENST00000451088 ACTN4O43707 911 aaKnown RBP10.45□□□□□ -0.74
GTF3C3-207ENST00000451088 CFHP08603 1231 aa10.45□□□□□ -0.74
GTF3C3-207ENST00000451088 CCDC102AQ96A19 550 aa10.45□□□□□ -0.74
GTF3C3-207ENST00000451088 KMT5BQ4FZB7 885 aa10.44□□□□□ -0.74
GTF3C3-207ENST00000451088 BARGINQ6ZT62 677 aa10.44□□□□□ -0.74
GTF3C3-207ENST00000451088 RSPH4AQ5TD94 716 aa10.43□□□□□ -0.74
GTF3C3-207ENST00000451088 PCDHB3Q9Y5E6 796 aa10.42□□□□□ -0.74
GTF3C3-207ENST00000451088 SULF1Q8IWU6 871 aa10.41□□□□□ -0.74
GTF3C3-207ENST00000451088 ZNF516Q92618 1163 aa10.41□□□□□ -0.74
GTF3C3-207ENST00000451088 DDX11L8A8MPP1 907 aa10.4□□□□□ -0.74
GTF3C3-207ENST00000451088 RGS20O76081 388 aa10.4□□□□□ -0.74
GTF3C3-207ENST00000451088 COPS2P61201 443 aa10.4□□□□□ -0.74
GTF3C3-207ENST00000451088 BLOC1S3Q6QNY0 202 aa10.39□□□□□ -0.75
GTF3C3-207ENST00000451088 ZPR1O75312 459 aa10.38□□□□□ -0.75
GTF3C3-207ENST00000451088 RDH13Q8NBN7 331 aa10.37□□□□□ -0.75
GTF3C3-207ENST00000451088 GCGRP47871 477 aa10.36□□□□□ -0.75
GTF3C3-207ENST00000451088 MDM2Q00987 491 aaPredicted RBP10.36□□□□□ -0.75
GTF3C3-207ENST00000451088 KRI1Q8N9T8 703 aaKnown RBP10.36□□□□□ -0.75
GTF3C3-207ENST00000451088 TMUB1Q9BVT8 246 aa10.36□□□□□ -0.75
GTF3C3-207ENST00000451088 NKX2-3Q8TAU0 364 aa10.35□□□□□ -0.75
GTF3C3-207ENST00000451088 BCANQ96GW7 911 aa10.35□□□□□ -0.75
GTF3C3-207ENST00000451088 CD46P15529 392 aa10.34□□□□□ -0.75
GTF3C3-207ENST00000451088 GPCPD1Q9NPB8 672 aa10.34□□□□□ -0.75
GTF3C3-207ENST00000451088 CLCN1P35523 988 aa10.33□□□□□ -0.76
GTF3C3-207ENST00000451088 FUT2Q10981 343 aa10.32□□□□□ -0.76
GTF3C3-207ENST00000451088 AMHR2Q16671 573 aa10.32□□□□□ -0.76
GTF3C3-207ENST00000451088 PPP1R18Q6NYC8 613 aa10.32□□□□□ -0.76
GTF3C3-207ENST00000451088 NR1I2O75469 434 aa10.31□□□□□ -0.76
GTF3C3-207ENST00000451088 PUS10Q3MIT2 529 aaKnown RBP10.31□□□□□ -0.76
GTF3C3-207ENST00000451088 FAM217BQ9NTX9 383 aaPredicted RBP10.31□□□□□ -0.76
GTF3C3-207ENST00000451088 ATP6V1AP38606 617 aa10.3□□□□□ -0.76
GTF3C3-207ENST00000451088 MORN1Q5T089 497 aa10.3□□□□□ -0.76
GTF3C3-207ENST00000451088 SCUBE3Q8IX30 993 aa10.3□□□□□ -0.76
GTF3C3-207ENST00000451088 REPIN1Q9BWE0 567 aaKnown RBP10.3□□□□□ -0.76
GTF3C3-207ENST00000451088 TLL1O43897 1013 aa10.29□□□□□ -0.76
GTF3C3-207ENST00000451088 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.29□□□□□ -0.76
GTF3C3-207ENST00000451088 TRIM66O15016 1216 aa10.26□□□□□ -0.77
GTF3C3-207ENST00000451088 AK7Q96M32 723 aa10.26□□□□□ -0.77
GTF3C3-207ENST00000451088 KDM4AO75164 1064 aa10.25□□□□□ -0.77
GTF3C3-207ENST00000451088 ADH1BP00325 375 aa10.25□□□□□ -0.77
GTF3C3-207ENST00000451088 GGCXP38435 758 aa10.25□□□□□ -0.77
GTF3C3-207ENST00000451088 THAP11Q96EK4 314 aa10.25□□□□□ -0.77
GTF3C3-207ENST00000451088 GRIPAP1Q4V328 841 aa10.24□□□□□ -0.77
GTF3C3-207ENST00000451088 SLC27A5Q9Y2P5 690 aa10.24□□□□□ -0.77
GTF3C3-207ENST00000451088 SALL2Q9Y467 1007 aaPredicted RBP10.24□□□□□ -0.77
GTF3C3-207ENST00000451088 USP46P62068 366 aa10.23□□□□□ -0.77
GTF3C3-207ENST00000451088 SSTR3P32745 418 aaPredicted RBP10.22□□□□□ -0.77
GTF3C3-207ENST00000451088 TTLL12Q14166 644 aaPredicted RBP10.22□□□□□ -0.77
GTF3C3-207ENST00000451088 SPSB2Q99619 263 aa10.22□□□□□ -0.77
GTF3C3-207ENST00000451088 RNF223E7ERA6 249 aa10.21□□□□□ -0.77
GTF3C3-207ENST00000451088 GIGYF2Q6Y7W6 1299 aaKnown RBP10.21□□□□□ -0.77
GTF3C3-207ENST00000451088 PARP9Q8IXQ6 854 aa10.21□□□□□ -0.77
GTF3C3-207ENST00000451088 SLC24A3Q9HC58 644 aa10.21□□□□□ -0.77
GTF3C3-207ENST00000451088 S1PR4O95977 384 aa10.2□□□□□ -0.78
GTF3C3-207ENST00000451088 SLC6A16Q9GZN6 736 aa10.2□□□□□ -0.78
GTF3C3-207ENST00000451088 HOXA2O43364 376 aa10.19□□□□□ -0.78
GTF3C3-207ENST00000451088 FMNL1O95466 1100 aaPredicted RBP10.19□□□□□ -0.78
GTF3C3-207ENST00000451088 BRICD5Q6PL45 260 aa10.19□□□□□ -0.78
GTF3C3-207ENST00000451088 ANKLE1Q8NAG6 615 aa10.18□□□□□ -0.78
GTF3C3-207ENST00000451088 PRKD2Q9BZL6 878 aa10.18□□□□□ -0.78
GTF3C3-207ENST00000451088 V9GY48 417 aaPredicted RBP10.18□□□□□ -0.78
GTF3C3-207ENST00000451088 RNF19BQ6ZMZ0 732 aa10.17□□□□□ -0.78
GTF3C3-207ENST00000451088 FAM160A2Q8N612 972 aaPredicted RBP10.17□□□□□ -0.78
GTF3C3-207ENST00000451088 PPEF1O14829 653 aaPredicted RBP10.16□□□□□ -0.78
GTF3C3-207ENST00000451088 PDE4DQ08499 809 aa10.16□□□□□ -0.78
GTF3C3-207ENST00000451088 Q3C1V9 767 aa10.16□□□□□ -0.78
GTF3C3-207ENST00000451088 HLA-CQ95604 372 aa10.16□□□□□ -0.78
GTF3C3-207ENST00000451088 MS4A1P11836 297 aa10.15□□□□□ -0.78
GTF3C3-207ENST00000451088 NUTM1Q86Y26 1132 aa10.15□□□□□ -0.78
GTF3C3-207ENST00000451088 EMID1Q96A84 441 aaPredicted RBP10.15□□□□□ -0.78
GTF3C3-207ENST00000451088 MSS51Q4VC12 460 aa10.14□□□□□ -0.79
GTF3C3-207ENST00000451088 SPIRE2Q8WWL2 714 aa10.14□□□□□ -0.79
GTF3C3-207ENST00000451088 BEGAINQ9BUH8 593 aa10.13□□□□□ -0.79
GTF3C3-207ENST00000451088 IRX2Q9BZI1 471 aaPredicted RBP10.13□□□□□ -0.79
GTF3C3-207ENST00000451088 GUCA2AQ02747 115 aa10.12□□□□□ -0.79
GTF3C3-207ENST00000451088 PRDM9Q9NQV7 894 aa10.11□□□□□ -0.79
GTF3C3-207ENST00000451088 SLC19A1P41440 591 aa10.1□□□□□ -0.79
GTF3C3-207ENST00000451088 PLA2G2CQ5R387 149 aa10.1□□□□□ -0.79
GTF3C3-207ENST00000451088 USB1Q9BQ65 265 aaKnown RBP10.1□□□□□ -0.79
GTF3C3-207ENST00000451088 MOXD2PA6NHM9 499 aa10.08□□□□□ -0.8
GTF3C3-207ENST00000451088 FDX1P10109 184 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms