RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 PLEKHG1Q9ULL1 1385 aa10.39□□□□□ -0.75
PMS1-217ENST00000450931 IDI1Q13907 227 aa10.39□□□□□ -0.75
PMS1-217ENST00000450931 SHPRHQ149N8 1683 aa10.38□□□□□ -0.75
PMS1-217ENST00000450931 PROSER2Q86WR7 435 aaPredicted RBP10.38□□□□□ -0.75
PMS1-217ENST00000450931 AHDC1Q5TGY3 1603 aaPredicted RBP10.38□□□□□ -0.75
PMS1-217ENST00000450931 POTEAQ6S8J7 498 aa10.38□□□□□ -0.75
PMS1-217ENST00000450931 SENP3Q9H4L4 574 aaPredicted RBP10.38□□□□□ -0.75
PMS1-217ENST00000450931 RRP7BPQ9NSQ0 103 aa10.38□□□□□ -0.75
PMS1-217ENST00000450931 TMEM131LA2VDJ0 1609 aa10.37□□□□□ -0.75
PMS1-217ENST00000450931 UNC13BO14795 1591 aa10.36□□□□□ -0.75
PMS1-217ENST00000450931 SETD1AO15047 1707 aaKnown RBP10.36□□□□□ -0.75
PMS1-217ENST00000450931 HDGFP51858 240 aaKnown RBP10.36□□□□□ -0.75
PMS1-217ENST00000450931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.36□□□□□ -0.754e-6■■□□□ 13.1
PMS1-217ENST00000450931 PIK3R4Q99570 1358 aa10.35□□□□□ -0.75
PMS1-217ENST00000450931 SPATA31A6Q5VVP1 1343 aa10.35□□□□□ -0.75
PMS1-217ENST00000450931 MYO5BQ9ULV0 1848 aa10.35□□□□□ -0.75
PMS1-217ENST00000450931 SLC26A8Q96RN1 970 aa10.34□□□□□ -0.75
PMS1-217ENST00000450931 RIMS2Q9UQ26 1411 aa10.34□□□□□ -0.75
PMS1-217ENST00000450931 SLAIN2Q9P270 581 aa10.34□□□□□ -0.75
PMS1-217ENST00000450931 TBX22Q9Y458 520 aa10.33□□□□□ -0.76
PMS1-217ENST00000450931 CDK12Q9NYV4 1490 aaPredicted RBP10.33□□□□□ -0.76
PMS1-217ENST00000450931 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.33□□□□□ -0.76
PMS1-217ENST00000450931 TRPM2O94759 1503 aa10.33□□□□□ -0.76
PMS1-217ENST00000450931 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.33□□□□□ -0.76
PMS1-217ENST00000450931 DCCP43146 1447 aa10.32□□□□□ -0.76
PMS1-217ENST00000450931 LRP6O75581 1613 aa10.32□□□□□ -0.76
PMS1-217ENST00000450931 ANKRD50Q9ULJ7 1429 aa10.32□□□□□ -0.76
PMS1-217ENST00000450931 APLP2Q06481 763 aa10.31□□□□□ -0.76
PMS1-217ENST00000450931 ZNF772Q68DY9 489 aaPredicted RBP10.31□□□□□ -0.76
PMS1-217ENST00000450931 IQGAP3Q86VI3 1631 aa10.31□□□□□ -0.76
PMS1-217ENST00000450931 ADAMTS13Q76LX8 1427 aa10.31□□□□□ -0.76
PMS1-217ENST00000450931 E9PCH4 1651 aa10.3□□□□□ -0.76
PMS1-217ENST00000450931 CADPS2Q86UW7 1296 aa10.3□□□□□ -0.76
PMS1-217ENST00000450931 XRN1Q8IZH2 1706 aaKnown RBP10.29□□□□□ -0.76
PMS1-217ENST00000450931 NHSL1Q5SYE7 1610 aa10.29□□□□□ -0.76
PMS1-217ENST00000450931 PPP1R15AO75807 674 aaPredicted RBP10.29□□□□□ -0.76
PMS1-217ENST00000450931 BCANQ96GW7 911 aa10.29□□□□□ -0.76
PMS1-217ENST00000450931 SETBP1Q9Y6X0 1596 aa10.28□□□□□ -0.76
PMS1-217ENST00000450931 C19orf44Q9H6X5 657 aa10.28□□□□□ -0.76
PMS1-217ENST00000450931 CHIC2Q9UKJ5 165 aa10.27□□□□□ -0.77
PMS1-217ENST00000450931 RBM33Q96EV2 1170 aaKnown RBP10.27□□□□□ -0.77
PMS1-217ENST00000450931 SETD5Q9C0A6 1442 aa10.27□□□□□ -0.77
PMS1-217ENST00000450931 ASXL1Q8IXJ9 1541 aa10.26□□□□□ -0.77
PMS1-217ENST00000450931 ROCK1Q13464 1354 aa10.26□□□□□ -0.77
PMS1-217ENST00000450931 MEX3CQ5U5Q3 659 aaKnown RBP10.26□□□□□ -0.77
PMS1-217ENST00000450931 NRXN3Q9Y4C0 1643 aa10.26□□□□□ -0.77
PMS1-217ENST00000450931 ATF3P18847 181 aa10.25□□□□□ -0.77
PMS1-217ENST00000450931 UPF1Q92900 1129 aaKnown RBP eCLIP10.25□□□□□ -0.77
PMS1-217ENST00000450931 LAMC1P11047 1609 aa10.25□□□□□ -0.77
PMS1-217ENST00000450931 C14orf37Q86TY3 774 aa10.24□□□□□ -0.77
PMS1-217ENST00000450931 LOC105371045A0A1W2PR82 267 aa10.23□□□□□ -0.77
PMS1-217ENST00000450931 SPHKAPQ2M3C7 1700 aa10.23□□□□□ -0.77
PMS1-217ENST00000450931 MST1RQ04912 1400 aa10.23□□□□□ -0.77
PMS1-217ENST00000450931 PTPRUQ92729 1446 aa10.23□□□□□ -0.77
PMS1-217ENST00000450931 RXRBP28702 533 aa10.22□□□□□ -0.77
PMS1-217ENST00000450931 BRINP3Q76B58 766 aa10.22□□□□□ -0.77
PMS1-217ENST00000450931 ADGRL3Q9HAR2 1447 aa10.21□□□□□ -0.78
PMS1-217ENST00000450931 NALCNQ8IZF0 1738 aa10.2□□□□□ -0.78
PMS1-217ENST00000450931 AMOTL2Q9Y2J4 779 aa10.2□□□□□ -0.78
PMS1-217ENST00000450931 PRAG1Q86YV5 1406 aa10.2□□□□□ -0.78
PMS1-217ENST00000450931 FAM50AQ14320 339 aaKnown RBP10.2□□□□□ -0.78
PMS1-217ENST00000450931 CHGAP10645 457 aaKnown RBP10.19□□□□□ -0.78
PMS1-217ENST00000450931 TRIM52Q96A61 297 aa10.19□□□□□ -0.78
PMS1-217ENST00000450931 LRRC59Q96AG4 307 aaKnown RBP10.19□□□□□ -0.78
PMS1-217ENST00000450931 RGS12O14924 1447 aa10.18□□□□□ -0.78
PMS1-217ENST00000450931 AFF2P51816 1311 aa10.18□□□□□ -0.78
PMS1-217ENST00000450931 PNPLA6Q8IY17 1366 aa10.18□□□□□ -0.78
PMS1-217ENST00000450931 NEXMIFQ5QGS0 1516 aa10.18□□□□□ -0.78
PMS1-217ENST00000450931 COL22A1Q8NFW1 1626 aaPredicted RBP10.18□□□□□ -0.78
PMS1-217ENST00000450931 PTCH1Q13635 1447 aa10.17□□□□□ -0.78
PMS1-217ENST00000450931 NUP155O75694 1391 aa10.17□□□□□ -0.78
PMS1-217ENST00000450931 RBM6P78332 1123 aaKnown RBP10.16□□□□□ -0.78
PMS1-217ENST00000450931 KIF1BO60333 1816 aa10.15□□□□□ -0.78
PMS1-217ENST00000450931 CLTCL1P53675 1640 aa10.15□□□□□ -0.78
PMS1-217ENST00000450931 NUTM2BA6NNL0 878 aaPredicted RBP10.15□□□□□ -0.79
PMS1-217ENST00000450931 NUTM2EB1AL46 878 aaPredicted RBP10.15□□□□□ -0.79
PMS1-217ENST00000450931 NUTM2AQ8IVF1 878 aaPredicted RBP10.15□□□□□ -0.79
PMS1-217ENST00000450931 ATAD2Q6PL18 1390 aa10.14□□□□□ -0.79
PMS1-217ENST00000450931 C1orf167Q5SNV9 1468 aa10.14□□□□□ -0.79
PMS1-217ENST00000450931 FOXD1Q16676 465 aa10.14□□□□□ -0.79
PMS1-217ENST00000450931 METP08581 1390 aa10.14□□□□□ -0.79
PMS1-217ENST00000450931 NUTM2DQ5VT03 806 aaPredicted RBP10.14□□□□□ -0.79
PMS1-217ENST00000450931 NGLY1Q96IV0 654 aa10.14□□□□□ -0.79
PMS1-217ENST00000450931 MARF1Q9Y4F3 1742 aaKnown RBP10.12□□□□□ -0.79
PMS1-217ENST00000450931 QTRT2Q9H974 415 aaKnown RBP10.12□□□□□ -0.79
PMS1-217ENST00000450931 CDC42BPGQ6DT37 1551 aa10.12□□□□□ -0.79
PMS1-217ENST00000450931 SOS2Q07890 1332 aaPredicted RBP10.11□□□□□ -0.79
PMS1-217ENST00000450931 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.11□□□□□ -0.79
PMS1-217ENST00000450931 C8orf37Q96NL8 207 aa10.11□□□□□ -0.79
PMS1-217ENST00000450931 HFM1A2PYH4 1435 aa10.11□□□□□ -0.79
PMS1-217ENST00000450931 ATRNO75882 1429 aa10.11□□□□□ -0.79
PMS1-217ENST00000450931 ZNF326Q5BKZ1 582 aaKnown RBP10.1□□□□□ -0.79
PMS1-217ENST00000450931 TRPC5Q9UL62 973 aaPredicted RBP10.1□□□□□ -0.79
PMS1-217ENST00000450931 MYOM2P54296 1465 aa10.09□□□□□ -0.79
PMS1-217ENST00000450931 FNBP4Q8N3X1 1017 aaPredicted RBP10.09□□□□□ -0.79
PMS1-217ENST00000450931 PPLO60437 1756 aa10.09□□□□□ -0.79
PMS1-217ENST00000450931 CCDC125Q86Z20 511 aa10.08□□□□□ -0.8
PMS1-217ENST00000450931 RPGRIP1LQ68CZ1 1315 aa10.08□□□□□ -0.8
PMS1-217ENST00000450931 PXDNQ92626 1479 aa10.07□□□□□ -0.8
PMS1-217ENST00000450931 VGFO15240 615 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms