RNA–Protein interactions for RNA: ENST00000449757.5

DDX39B-211, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-211ENST00000449757 FAM135BQ49AJ0 1406 aa16.02■□□□□ 0.16
DDX39B-211ENST00000449757 PHLPP1O60346 1717 aa16.02■□□□□ 0.16
DDX39B-211ENST00000449757 KCNA6P17658 529 aa16.02■□□□□ 0.16
DDX39B-211ENST00000449757 CHD2O14647 1828 aaKnown RBP16.01■□□□□ 0.15
DDX39B-211ENST00000449757 PPP1R15AO75807 674 aaPredicted RBP16■□□□□ 0.15
DDX39B-211ENST00000449757 ANKRD50Q9ULJ7 1429 aa16■□□□□ 0.15
DDX39B-211ENST00000449757 MSH6P52701 1360 aa16■□□□□ 0.15
DDX39B-211ENST00000449757 RPRD2Q5VT52 1461 aaKnown RBP15.99■□□□□ 0.15
DDX39B-211ENST00000449757 SLC52A1Q9NWF4 448 aa15.98■□□□□ 0.15
DDX39B-211ENST00000449757 TMEM131LA2VDJ0 1609 aa15.97■□□□□ 0.15
DDX39B-211ENST00000449757 SETD1AO15047 1707 aaKnown RBP15.97■□□□□ 0.15
DDX39B-211ENST00000449757 UNC13BO14795 1591 aa15.97■□□□□ 0.15
DDX39B-211ENST00000449757 RIMS2Q9UQ26 1411 aa15.97■□□□□ 0.15
DDX39B-211ENST00000449757 RGS17Q9UGC6 210 aaPredicted RBP15.97■□□□□ 0.15
DDX39B-211ENST00000449757 CHGAP10645 457 aaKnown RBP15.96■□□□□ 0.15
DDX39B-211ENST00000449757 E9PCH4 1651 aa15.95■□□□□ 0.14
DDX39B-211ENST00000449757 ZFYVE9O95405 1425 aa15.95■□□□□ 0.14
DDX39B-211ENST00000449757 PLEKHG1Q9ULL1 1385 aa15.95■□□□□ 0.14
DDX39B-211ENST00000449757 C14orf37Q86TY3 774 aa15.93■□□□□ 0.14
DDX39B-211ENST00000449757 DIP2AQ14689 1571 aa15.92■□□□□ 0.14
DDX39B-211ENST00000449757 COL16A1Q07092 1604 aaPredicted RBP15.91■□□□□ 0.14
DDX39B-211ENST00000449757 IQGAP3Q86VI3 1631 aa15.91■□□□□ 0.14
DDX39B-211ENST00000449757 HDGFP51858 240 aaKnown RBP15.91■□□□□ 0.14
DDX39B-211ENST00000449757 NUTM2DQ5VT03 806 aaPredicted RBP15.91■□□□□ 0.14
DDX39B-211ENST00000449757 POTEAQ6S8J7 498 aa15.91■□□□□ 0.14
DDX39B-211ENST00000449757 SLAIN2Q9P270 581 aa15.9■□□□□ 0.14
DDX39B-211ENST00000449757 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.9■□□□□ 0.14
DDX39B-211ENST00000449757 JCADQ9P266 1359 aa15.89■□□□□ 0.13
DDX39B-211ENST00000449757 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.88■□□□□ 0.13
DDX39B-211ENST00000449757 TRPM2O94759 1503 aa15.87■□□□□ 0.13
DDX39B-211ENST00000449757 MEX3CQ5U5Q3 659 aaKnown RBP15.86■□□□□ 0.13
DDX39B-211ENST00000449757 SPHKAPQ2M3C7 1700 aa15.85■□□□□ 0.13
DDX39B-211ENST00000449757 SHPRHQ149N8 1683 aa15.85■□□□□ 0.13
DDX39B-211ENST00000449757 ADAMTS13Q76LX8 1427 aa15.85■□□□□ 0.13
DDX39B-211ENST00000449757 AHDC1Q5TGY3 1603 aaPredicted RBP15.84■□□□□ 0.13
DDX39B-211ENST00000449757 ITGAEP38570 1179 aa15.84■□□□□ 0.13
DDX39B-211ENST00000449757 TBX22Q9Y458 520 aa15.84■□□□□ 0.13
DDX39B-211ENST00000449757 LRP6O75581 1613 aa15.83■□□□□ 0.13
DDX39B-211ENST00000449757 ATF3P18847 181 aa15.83■□□□□ 0.12
DDX39B-211ENST00000449757 NCOA3Q9Y6Q9 1424 aa15.83■□□□□ 0.12
DDX39B-211ENST00000449757 NUP155O75694 1391 aa15.82■□□□□ 0.12
DDX39B-211ENST00000449757 ROCK1Q13464 1354 aa15.82■□□□□ 0.12
DDX39B-211ENST00000449757 CADPS2Q86UW7 1296 aa15.81■□□□□ 0.12
DDX39B-211ENST00000449757 NRXN3Q9Y4C0 1643 aa15.8■□□□□ 0.12
DDX39B-211ENST00000449757 PIK3R4Q99570 1358 aa15.8■□□□□ 0.12
DDX39B-211ENST00000449757 XRN1Q8IZH2 1706 aaKnown RBP15.8■□□□□ 0.12
DDX39B-211ENST00000449757 SPATA31A6Q5VVP1 1343 aa15.79■□□□□ 0.12
DDX39B-211ENST00000449757 C19orf44Q9H6X5 657 aa15.78■□□□□ 0.12
DDX39B-211ENST00000449757 AMOTL2Q9Y2J4 779 aa15.78■□□□□ 0.12
DDX39B-211ENST00000449757 PTPRUQ92729 1446 aa15.77■□□□□ 0.12
DDX39B-211ENST00000449757 ZNF326Q5BKZ1 582 aaKnown RBP15.77■□□□□ 0.12
DDX39B-211ENST00000449757 SETBP1Q9Y6X0 1596 aa15.76■□□□□ 0.11
DDX39B-211ENST00000449757 KIF1BO60333 1816 aa15.76■□□□□ 0.11
DDX39B-211ENST00000449757 NUTM2BA6NNL0 878 aaPredicted RBP15.76■□□□□ 0.11
DDX39B-211ENST00000449757 NUTM2EB1AL46 878 aaPredicted RBP15.76■□□□□ 0.11
DDX39B-211ENST00000449757 NUTM2AQ8IVF1 878 aaPredicted RBP15.76■□□□□ 0.11
DDX39B-211ENST00000449757 TRIM52Q96A61 297 aa15.76■□□□□ 0.11
DDX39B-211ENST00000449757 ASXL1Q8IXJ9 1541 aa15.76■□□□□ 0.11
DDX39B-211ENST00000449757 NHSL1Q5SYE7 1610 aa15.76■□□□□ 0.11
DDX39B-211ENST00000449757 ZNF772Q68DY9 489 aaPredicted RBP15.75■□□□□ 0.11
DDX39B-211ENST00000449757 NALCNQ8IZF0 1738 aa15.74■□□□□ 0.11
DDX39B-211ENST00000449757 BRINP3Q76B58 766 aa15.74■□□□□ 0.11
DDX39B-211ENST00000449757 PPARGC1BQ86YN6 1023 aaKnown RBP15.74■□□□□ 0.11
DDX39B-211ENST00000449757 CLTCL1P53675 1640 aa15.74■□□□□ 0.11
DDX39B-211ENST00000449757 DCCP43146 1447 aa15.74■□□□□ 0.11
DDX39B-211ENST00000449757 MST1RQ04912 1400 aa15.71■□□□□ 0.11
DDX39B-211ENST00000449757 NEXMIFQ5QGS0 1516 aa15.71■□□□□ 0.11
DDX39B-211ENST00000449757 METP08581 1390 aa15.69■□□□□ 0.1
DDX39B-211ENST00000449757 ADGRL3Q9HAR2 1447 aa15.68■□□□□ 0.1
DDX39B-211ENST00000449757 RXRBP28702 533 aa15.68■□□□□ 0.1
DDX39B-211ENST00000449757 AFF2P51816 1311 aa15.68■□□□□ 0.1
DDX39B-211ENST00000449757 SETD5Q9C0A6 1442 aa15.67■□□□□ 0.1
DDX39B-211ENST00000449757 DDX17Q92841 729 aaKnown RBP15.65■□□□□ 0.1
DDX39B-211ENST00000449757 UPF1Q92900 1129 aaKnown RBP eCLIP15.65■□□□□ 0.1
DDX39B-211ENST00000449757 C8orf37Q96NL8 207 aa15.65■□□□□ 0.1
DDX39B-211ENST00000449757 LRRC59Q96AG4 307 aaKnown RBP15.63■□□□□ 0.09
DDX39B-211ENST00000449757 CDK12Q9NYV4 1490 aaPredicted RBP15.63■□□□□ 0.09
DDX39B-211ENST00000449757 PNPLA6Q8IY17 1366 aa15.62■□□□□ 0.09
DDX39B-211ENST00000449757 PPLO60437 1756 aa15.62■□□□□ 0.09
DDX39B-211ENST00000449757 RGS12O14924 1447 aa15.6■□□□□ 0.09
DDX39B-211ENST00000449757 PTCH1Q13635 1447 aa15.6■□□□□ 0.09
DDX39B-211ENST00000449757 C1orf167Q5SNV9 1468 aa15.6■□□□□ 0.09
DDX39B-211ENST00000449757 ADAMTS2O95450 1211 aa15.59■□□□□ 0.09
DDX39B-211ENST00000449757 NAIPQ13075 1403 aa15.59■□□□□ 0.09
DDX39B-211ENST00000449757 LAMC1P11047 1609 aa15.58■□□□□ 0.09
DDX39B-211ENST00000449757 QTRT2Q9H974 415 aaKnown RBP15.57■□□□□ 0.08
DDX39B-211ENST00000449757 ROBO2Q9HCK4 1378 aa15.57■□□□□ 0.08
DDX39B-211ENST00000449757 RRBP1Q9P2E9 1410 aaKnown RBP15.57■□□□□ 0.08
DDX39B-211ENST00000449757 RBM6P78332 1123 aaKnown RBP15.56■□□□□ 0.08
DDX39B-211ENST00000449757 NGLY1Q96IV0 654 aa15.56■□□□□ 0.08
DDX39B-211ENST00000449757 VGFO15240 615 aaPredicted RBP15.55■□□□□ 0.08
DDX39B-211ENST00000449757 ORAI2Q96SN7 254 aa15.54■□□□□ 0.08
DDX39B-211ENST00000449757 MARF1Q9Y4F3 1742 aaKnown RBP15.54■□□□□ 0.08
DDX39B-211ENST00000449757 COL22A1Q8NFW1 1626 aaPredicted RBP15.54■□□□□ 0.08
DDX39B-211ENST00000449757 CDC42BPGQ6DT37 1551 aa15.53■□□□□ 0.08
DDX39B-211ENST00000449757 HFM1A2PYH4 1435 aa15.52■□□□□ 0.08
DDX39B-211ENST00000449757 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.08
DDX39B-211ENST00000449757 USP21Q9UK80 565 aa15.51■□□□□ 0.07
DDX39B-211ENST00000449757 SOS2Q07890 1332 aaPredicted RBP15.5■□□□□ 0.07
DDX39B-211ENST00000449757 RPGRIP1LQ68CZ1 1315 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms