RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 ADGRB3O60242 1522 aa28.02■■■□□ 2.08
CHCHD3-203ENST00000448878 NOS1P29475 1434 aa28.02■■■□□ 2.08
CHCHD3-203ENST00000448878 SLAIN2Q9P270 581 aa28■■■□□ 2.07
CHCHD3-203ENST00000448878 CHGAP10645 457 aaKnown RBP27.99■■■□□ 2.07
CHCHD3-203ENST00000448878 HDGFP51858 240 aaKnown RBP27.99■■■□□ 2.07
CHCHD3-203ENST00000448878 NKTRP30414 1462 aaKnown RBP27.97■■■□□ 2.07
CHCHD3-203ENST00000448878 C14orf37Q86TY3 774 aa27.97■■■□□ 2.07
CHCHD3-203ENST00000448878 NWD1Q149M9 1564 aa27.93■■■□□ 2.06
CHCHD3-203ENST00000448878 ANKRD50Q9ULJ7 1429 aa27.92■■■□□ 2.06
CHCHD3-203ENST00000448878 PHLPP1O60346 1717 aa27.92■■■□□ 2.06
CHCHD3-203ENST00000448878 RIMS2Q9UQ26 1411 aa27.92■■■□□ 2.06
CHCHD3-203ENST00000448878 PLEKHG1Q9ULL1 1385 aa27.91■■■□□ 2.06
CHCHD3-203ENST00000448878 NUTM2DQ5VT03 806 aaPredicted RBP27.91■■■□□ 2.06
CHCHD3-203ENST00000448878 ADGRL2O95490 1459 aa27.9■■■□□ 2.06
CHCHD3-203ENST00000448878 RPRD2Q5VT52 1461 aaKnown RBP27.89■■■□□ 2.06
CHCHD3-203ENST00000448878 JCADQ9P266 1359 aa27.89■■■□□ 2.06
CHCHD3-203ENST00000448878 MYO5BQ9ULV0 1848 aa27.88■■■□□ 2.05
CHCHD3-203ENST00000448878 GCC2Q8IWJ2 1684 aa27.87■■■□□ 2.05
CHCHD3-203ENST00000448878 ZFYVE9O95405 1425 aa27.87■■■□□ 2.05
CHCHD3-203ENST00000448878 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.87■■■□□ 2.05
CHCHD3-203ENST00000448878 MEX3CQ5U5Q3 659 aaKnown RBP27.86■■■□□ 2.05
CHCHD3-203ENST00000448878 TBX22Q9Y458 520 aa27.86■■■□□ 2.05
CHCHD3-203ENST00000448878 CHD2O14647 1828 aaKnown RBP27.85■■■□□ 2.05
CHCHD3-203ENST00000448878 ATF3P18847 181 aa27.82■■■□□ 2.04
CHCHD3-203ENST00000448878 TMEM131LA2VDJ0 1609 aa27.81■■■□□ 2.04
CHCHD3-203ENST00000448878 CADPS2Q86UW7 1296 aa27.79■■■□□ 2.04
CHCHD3-203ENST00000448878 SETD1AO15047 1707 aaKnown RBP27.78■■■□□ 2.04
CHCHD3-203ENST00000448878 C19orf44Q9H6X5 657 aa27.77■■■□□ 2.04
CHCHD3-203ENST00000448878 NCOA3Q9Y6Q9 1424 aa27.75■■■□□ 2.03
CHCHD3-203ENST00000448878 COL16A1Q07092 1604 aaPredicted RBP27.75■■■□□ 2.03
CHCHD3-203ENST00000448878 SPATA31A6Q5VVP1 1343 aa27.75■■■□□ 2.03
CHCHD3-203ENST00000448878 TRIM52Q96A61 297 aa27.74■■■□□ 2.03
CHCHD3-203ENST00000448878 ZNF772Q68DY9 489 aaPredicted RBP27.73■■■□□ 2.03
CHCHD3-203ENST00000448878 AMOTL2Q9Y2J4 779 aa27.72■■■□□ 2.03
CHCHD3-203ENST00000448878 ADAMTS13Q76LX8 1427 aa27.72■■■□□ 2.03
CHCHD3-203ENST00000448878 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.72■■■□□ 2.03
CHCHD3-203ENST00000448878 E9PCH4 1651 aa27.72■■■□□ 2.03
CHCHD3-203ENST00000448878 NUTM2BA6NNL0 878 aaPredicted RBP27.71■■■□□ 2.03
CHCHD3-203ENST00000448878 NUTM2EB1AL46 878 aaPredicted RBP27.71■■■□□ 2.03
CHCHD3-203ENST00000448878 NUTM2AQ8IVF1 878 aaPredicted RBP27.71■■■□□ 2.03
CHCHD3-203ENST00000448878 UNC13BO14795 1591 aa27.7■■■□□ 2.03
CHCHD3-203ENST00000448878 ITGAEP38570 1179 aa27.7■■■□□ 2.02
CHCHD3-203ENST00000448878 LRP6O75581 1613 aa27.7■■■□□ 2.02
CHCHD3-203ENST00000448878 PIK3R4Q99570 1358 aa27.69■■■□□ 2.02
CHCHD3-203ENST00000448878 DIP2AQ14689 1571 aa27.68■■■□□ 2.02
CHCHD3-203ENST00000448878 NUP155O75694 1391 aa27.67■■■□□ 2.02
CHCHD3-203ENST00000448878 TRPM2O94759 1503 aa27.66■■■□□ 2.02
CHCHD3-203ENST00000448878 ZNF326Q5BKZ1 582 aaKnown RBP27.65■■■□□ 2.02
CHCHD3-203ENST00000448878 BRINP3Q76B58 766 aa27.65■■■□□ 2.02
CHCHD3-203ENST00000448878 AHDC1Q5TGY3 1603 aaPredicted RBP27.63■■■□□ 2.01
CHCHD3-203ENST00000448878 RXRBP28702 533 aa27.62■■■□□ 2.01
CHCHD3-203ENST00000448878 PTPRUQ92729 1446 aa27.61■■■□□ 2.01
CHCHD3-203ENST00000448878 IQGAP3Q86VI3 1631 aa27.61■■■□□ 2.01
CHCHD3-203ENST00000448878 UPF1Q92900 1129 aaKnown RBP eCLIP27.61■■■□□ 2.01
CHCHD3-203ENST00000448878 ROCK1Q13464 1354 aa27.6■■■□□ 2.01
CHCHD3-203ENST00000448878 SHPRHQ149N8 1683 aa27.6■■■□□ 2.01
CHCHD3-203ENST00000448878 AFF2P51816 1311 aa27.54■■■□□ 2
CHCHD3-203ENST00000448878 PPARGC1BQ86YN6 1023 aaKnown RBP27.53■■■□□ 2
CHCHD3-203ENST00000448878 LRRC59Q96AG4 307 aaKnown RBP27.52■■■□□ 2
CHCHD3-203ENST00000448878 ASXL1Q8IXJ9 1541 aa27.51■■■□□ 2
CHCHD3-203ENST00000448878 DCCP43146 1447 aa27.51■■□□□ 1.99
CHCHD3-203ENST00000448878 DDX17Q92841 729 aaKnown RBP27.5■■□□□ 1.99
CHCHD3-203ENST00000448878 C8orf37Q96NL8 207 aa27.49■■□□□ 1.99
CHCHD3-203ENST00000448878 METP08581 1390 aa27.48■■□□□ 1.99
CHCHD3-203ENST00000448878 MST1RQ04912 1400 aa27.48■■□□□ 1.99
CHCHD3-203ENST00000448878 NRXN3Q9Y4C0 1643 aa27.46■■□□□ 1.99
CHCHD3-203ENST00000448878 SETD5Q9C0A6 1442 aa27.46■■□□□ 1.99
CHCHD3-203ENST00000448878 SETBP1Q9Y6X0 1596 aa27.46■■□□□ 1.99
CHCHD3-203ENST00000448878 XRN1Q8IZH2 1706 aaKnown RBP27.46■■□□□ 1.99
CHCHD3-203ENST00000448878 SPHKAPQ2M3C7 1700 aa27.45■■□□□ 1.99
CHCHD3-203ENST00000448878 QTRT2Q9H974 415 aaKnown RBP27.45■■□□□ 1.98
CHCHD3-203ENST00000448878 NHSL1Q5SYE7 1610 aa27.41■■□□□ 1.98
CHCHD3-203ENST00000448878 ADAMTS2O95450 1211 aa27.41■■□□□ 1.98
CHCHD3-203ENST00000448878 CDK12Q9NYV4 1490 aaPredicted RBP27.4■■□□□ 1.98
CHCHD3-203ENST00000448878 NGLY1Q96IV0 654 aa27.4■■□□□ 1.98
CHCHD3-203ENST00000448878 ADGRL3Q9HAR2 1447 aa27.4■■□□□ 1.98
CHCHD3-203ENST00000448878 RBM6P78332 1123 aaKnown RBP27.39■■□□□ 1.98
CHCHD3-203ENST00000448878 PNPLA6Q8IY17 1366 aa27.38■■□□□ 1.97
CHCHD3-203ENST00000448878 NALCNQ8IZF0 1738 aa27.34■■□□□ 1.97
CHCHD3-203ENST00000448878 NEXMIFQ5QGS0 1516 aa27.33■■□□□ 1.97
CHCHD3-203ENST00000448878 CLTCL1P53675 1640 aa27.33■■□□□ 1.97
CHCHD3-203ENST00000448878 ORAI2Q96SN7 254 aa27.32■■□□□ 1.96
CHCHD3-203ENST00000448878 RGS12O14924 1447 aa27.32■■□□□ 1.96
CHCHD3-203ENST00000448878 C1orf167Q5SNV9 1468 aa27.32■■□□□ 1.96
CHCHD3-203ENST00000448878 VGFO15240 615 aaPredicted RBP27.31■■□□□ 1.96
CHCHD3-203ENST00000448878 KIF1BO60333 1816 aa27.3■■□□□ 1.96
CHCHD3-203ENST00000448878 USP21Q9UK80 565 aa27.28■■□□□ 1.96
CHCHD3-203ENST00000448878 ROBO2Q9HCK4 1378 aa27.24■■□□□ 1.95
CHCHD3-203ENST00000448878 SOS2Q07890 1332 aaPredicted RBP27.23■■□□□ 1.95
CHCHD3-203ENST00000448878 TRPC5Q9UL62 973 aaPredicted RBP27.22■■□□□ 1.95
CHCHD3-203ENST00000448878 PTCH1Q13635 1447 aa27.21■■□□□ 1.95
CHCHD3-203ENST00000448878 ESCO1Q5FWF5 840 aa27.2■■□□□ 1.94
CHCHD3-203ENST00000448878 ATAD2Q6PL18 1390 aa27.2■■□□□ 1.94
CHCHD3-203ENST00000448878 SLC4A1APQ9BWU0 796 aaKnown RBP27.18■■□□□ 1.94
CHCHD3-203ENST00000448878 RPGRIP1LQ68CZ1 1315 aa27.17■■□□□ 1.94
CHCHD3-203ENST00000448878 NAIPQ13075 1403 aa27.17■■□□□ 1.94
CHCHD3-203ENST00000448878 FNBP4Q8N3X1 1017 aaPredicted RBP27.15■■□□□ 1.94
CHCHD3-203ENST00000448878 NUTM2FA1L443 756 aa27.14■■□□□ 1.94
CHCHD3-203ENST00000448878 XPCQ01831 940 aaPredicted RBP27.14■■□□□ 1.94
CHCHD3-203ENST00000448878 HFM1A2PYH4 1435 aa27.14■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms