RNA–Protein interactions for RNA: ENST00000446404.1

AP000402.1-201, humanhuman

TSL 3 BASIC

Gene AP000402.1, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000402.1-201ENST00000446404 CD46P15529 392 aa13.14□□□□□ -0.31
AP000402.1-201ENST00000446404 DDX11L8A8MPP1 907 aa13.13□□□□□ -0.31
AP000402.1-201ENST00000446404 FAM98CQ17RN3 349 aaKnown RBP13.13□□□□□ -0.31
AP000402.1-201ENST00000446404 ERICH6Q7L0X2 663 aa13.13□□□□□ -0.31
AP000402.1-201ENST00000446404 NBPF3Q9H094 633 aa13.13□□□□□ -0.31
AP000402.1-201ENST00000446404 LAPTM4BQ86VI4 370 aa13.12□□□□□ -0.31
AP000402.1-201ENST00000446404 BHMG1C9JSJ3 638 aaPredicted RBP13.11□□□□□ -0.31
AP000402.1-201ENST00000446404 LSM11P83369 360 aaKnown RBP eCLIP13.11□□□□□ -0.31
AP000402.1-201ENST00000446404 PCMTD1Q96MG8 357 aaPredicted RBP13.11□□□□□ -0.31
AP000402.1-201ENST00000446404 TIMELESSQ9UNS1 1208 aa13.11□□□□□ -0.31
AP000402.1-201ENST00000446404 SKIV2LQ15477 1246 aaKnown RBP13.1□□□□□ -0.31
AP000402.1-201ENST00000446404 SWT1Q5T5J6 900 aaKnown RBP13.1□□□□□ -0.31
AP000402.1-201ENST00000446404 DIXDC1Q155Q3 683 aa13.09□□□□□ -0.31
AP000402.1-201ENST00000446404 TBC1D2Q9BYX2 928 aa13.09□□□□□ -0.31
AP000402.1-201ENST00000446404 MYSM1Q5VVJ2 828 aa13.08□□□□□ -0.32
AP000402.1-201ENST00000446404 ADGRD1Q6QNK2 874 aa13.08□□□□□ -0.32
AP000402.1-201ENST00000446404 HDGFP51858 240 aaKnown RBP13.06□□□□□ -0.32
AP000402.1-201ENST00000446404 RDH13Q8NBN7 331 aa13.06□□□□□ -0.32
AP000402.1-201ENST00000446404 SPIRE2Q8WWL2 714 aa13.06□□□□□ -0.32
AP000402.1-201ENST00000446404 RSPH4AQ5TD94 716 aa13.05□□□□□ -0.32
AP000402.1-201ENST00000446404 MRPL50Q8N5N7 158 aaKnown RBP13.04□□□□□ -0.32
AP000402.1-201ENST00000446404 HRO43593 1189 aa13.03□□□□□ -0.32
AP000402.1-201ENST00000446404 SAMD7Q7Z3H4 446 aa13.03□□□□□ -0.32
AP000402.1-201ENST00000446404 C14orf37Q86TY3 774 aa13.03□□□□□ -0.32
AP000402.1-201ENST00000446404 NUTM1Q86Y26 1132 aa13.03□□□□□ -0.32
AP000402.1-201ENST00000446404 POLR3EQ9NVU0 708 aa13.03□□□□□ -0.32
AP000402.1-201ENST00000446404 SLC10A3P09131 477 aa13.02□□□□□ -0.33
AP000402.1-201ENST00000446404 SLC4A3P48751 1232 aa13.02□□□□□ -0.33
AP000402.1-201ENST00000446404 CLK2P49760 499 aaKnown RBP13.02□□□□□ -0.33
AP000402.1-201ENST00000446404 SLF2Q8IX21 1173 aa13.02□□□□□ -0.33
AP000402.1-201ENST00000446404 ZFRQ96KR1 1074 aaKnown RBP13.02□□□□□ -0.33
AP000402.1-201ENST00000446404 GCGRP47871 477 aa13.01□□□□□ -0.33
AP000402.1-201ENST00000446404 PROCA1Q8NCQ7 364 aaPredicted RBP13□□□□□ -0.33
AP000402.1-201ENST00000446404 ANKRD13DQ6ZTN6 518 aa12.99□□□□□ -0.33
AP000402.1-201ENST00000446404 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.99□□□□□ -0.33
AP000402.1-201ENST00000446404 KDM4AO75164 1064 aa12.98□□□□□ -0.33
AP000402.1-201ENST00000446404 RIC3Q7Z5B4 369 aa12.98□□□□□ -0.33
AP000402.1-201ENST00000446404 USP46P62068 366 aa12.97□□□□□ -0.33
AP000402.1-201ENST00000446404 LIMD1Q9UGP4 676 aa12.97□□□□□ -0.33
AP000402.1-201ENST00000446404 ATP1B4Q9UN42 357 aaPredicted RBP12.97□□□□□ -0.33
AP000402.1-201ENST00000446404 MOXD2PA6NHM9 499 aa12.96□□□□□ -0.33
AP000402.1-201ENST00000446404 SPTLC1O15269 473 aa12.96□□□□□ -0.33
AP000402.1-201ENST00000446404 GJA5P36382 358 aa12.96□□□□□ -0.33
AP000402.1-201ENST00000446404 TUSC1Q2TAM9 212 aa12.96□□□□□ -0.33
AP000402.1-201ENST00000446404 RSBN1LQ6PCB5 846 aaPredicted RBP12.96□□□□□ -0.33
AP000402.1-201ENST00000446404 STAC3Q96MF2 364 aa12.95□□□□□ -0.34
AP000402.1-201ENST00000446404 LRCH3Q96II8 777 aa12.94□□□□□ -0.34
AP000402.1-201ENST00000446404 RNF40O75150 1001 aa12.93□□□□□ -0.34
AP000402.1-201ENST00000446404 KRTAP3-3Q9BYR6 98 aa12.93□□□□□ -0.34
AP000402.1-201ENST00000446404 KRTAP3-2Q9BYR7 98 aa12.93□□□□□ -0.34
AP000402.1-201ENST00000446404 HOXA2O43364 376 aa12.92□□□□□ -0.34
AP000402.1-201ENST00000446404 CFHP08603 1231 aa12.92□□□□□ -0.34
AP000402.1-201ENST00000446404 NDUFV2P19404 249 aa12.92□□□□□ -0.34
AP000402.1-201ENST00000446404 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.92□□□□□ -0.34
AP000402.1-201ENST00000446404 GOLGA8CPA6NN73 597 aa12.91□□□□□ -0.34
AP000402.1-201ENST00000446404 ANKK1Q8NFD2 765 aa12.91□□□□□ -0.34
AP000402.1-201ENST00000446404 NECTIN2Q92692 538 aa12.91□□□□□ -0.34
AP000402.1-201ENST00000446404 FLIIQ13045 1269 aa12.9□□□□□ -0.34
AP000402.1-201ENST00000446404 PPP2R2DQ66LE6 453 aa12.88□□□□□ -0.35
AP000402.1-201ENST00000446404 SOWAHBA6NEL2 793 aa12.87□□□□□ -0.35
AP000402.1-201ENST00000446404 FUT2Q10981 343 aa12.87□□□□□ -0.35
AP000402.1-201ENST00000446404 KMT5BQ4FZB7 885 aa12.87□□□□□ -0.35
AP000402.1-201ENST00000446404 FDX1P10109 184 aa12.86□□□□□ -0.35
AP000402.1-201ENST00000446404 RFC5P40937 340 aa12.86□□□□□ -0.35
AP000402.1-201ENST00000446404 GRIPAP1Q4V328 841 aa12.86□□□□□ -0.35
AP000402.1-201ENST00000446404 FBXO31Q5XUX0 539 aaPredicted RBP12.86□□□□□ -0.35
AP000402.1-201ENST00000446404 PCDHB15Q9Y5E8 787 aa12.86□□□□□ -0.35
AP000402.1-201ENST00000446404 LILRB3O75022 631 aa12.85□□□□□ -0.35
AP000402.1-201ENST00000446404 CSPP1Q1MSJ5 1256 aa12.85□□□□□ -0.35
AP000402.1-201ENST00000446404 PRPF38BQ5VTL8 546 aaKnown RBP12.85□□□□□ -0.35
AP000402.1-201ENST00000446404 WNT2BQ93097 391 aa12.85□□□□□ -0.35
AP000402.1-201ENST00000446404 QPCTQ16769 361 aa12.84□□□□□ -0.35
AP000402.1-201ENST00000446404 HLA-CQ95604 372 aa12.84□□□□□ -0.35
AP000402.1-201ENST00000446404 ACTN4O43707 911 aaKnown RBP12.83□□□□□ -0.36
AP000402.1-201ENST00000446404 ATP6V1AP38606 617 aa12.83□□□□□ -0.36
AP000402.1-201ENST00000446404 BCAMP50895 628 aa12.83□□□□□ -0.36
AP000402.1-201ENST00000446404 POTEGQ6S5H5 508 aa12.83□□□□□ -0.36
AP000402.1-201ENST00000446404 PCDHGC3Q9UN70 934 aa12.83□□□□□ -0.36
AP000402.1-201ENST00000446404 HPS5Q9UPZ3 1129 aa12.83□□□□□ -0.36
AP000402.1-201ENST00000446404 PPP4CP60510 307 aa12.82□□□□□ -0.36
AP000402.1-201ENST00000446404 GUCA2AQ02747 115 aa12.82□□□□□ -0.36
AP000402.1-201ENST00000446404 MCM6Q14566 821 aa12.82□□□□□ -0.36
AP000402.1-201ENST00000446404 PRR14Q9BWN1 585 aa12.82□□□□□ -0.36
AP000402.1-201ENST00000446404 TSR3Q9UJK0 312 aaKnown RBP12.82□□□□□ -0.36
AP000402.1-201ENST00000446404 TMEM259Q4ZIN3 620 aa12.81□□□□□ -0.36
AP000402.1-201ENST00000446404 ZBTB3Q9H5J0 574 aa12.81□□□□□ -0.36
AP000402.1-201ENST00000446404 POTEMA6NI47 508 aa12.8□□□□□ -0.36
AP000402.1-201ENST00000446404 CDAN1Q8IWY9 1227 aa12.8□□□□□ -0.36
AP000402.1-201ENST00000446404 CABLES1Q8TDN4 633 aa12.8□□□□□ -0.36
AP000402.1-201ENST00000446404 NUTM2BA6NNL0 878 aaPredicted RBP12.79□□□□□ -0.36
AP000402.1-201ENST00000446404 NUTM2EB1AL46 878 aaPredicted RBP12.79□□□□□ -0.36
AP000402.1-201ENST00000446404 HRCP23327 699 aa12.79□□□□□ -0.36
AP000402.1-201ENST00000446404 NUTM2DQ5VT03 806 aaPredicted RBP12.79□□□□□ -0.36
AP000402.1-201ENST00000446404 NUTM2AQ8IVF1 878 aaPredicted RBP12.79□□□□□ -0.36
AP000402.1-201ENST00000446404 BANK1Q8NDB2 785 aa12.79□□□□□ -0.36
AP000402.1-201ENST00000446404 RTL5Q5HYW3 569 aaPredicted RBP12.78□□□□□ -0.36
AP000402.1-201ENST00000446404 ZMYND15Q9H091 742 aa12.78□□□□□ -0.36
AP000402.1-201ENST00000446404 MORN1Q5T089 497 aa12.77□□□□□ -0.37
AP000402.1-201ENST00000446404 SPDYE5A6NIY4 337 aa12.76□□□□□ -0.37
AP000402.1-201ENST00000446404 APLP1P51693 650 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms