RNA–Protein interactions for RNA: ENST00000444870.6

SMIM1-201, Transcript of small integral membrane protein 1 (Vel blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM1, Length 546 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1-201ENST00000444870 ROBO1Q9Y6N7 1651 aa29.93■■■□□ 2.38
SMIM1-201ENST00000444870 SLAIN2Q9P270 581 aa29.93■■■□□ 2.38
SMIM1-201ENST00000444870 KDM5AP29375 1690 aaKnown RBP29.91■■■□□ 2.38
SMIM1-201ENST00000444870 CHGAP10645 457 aaKnown RBP29.9■■■□□ 2.38
SMIM1-201ENST00000444870 NKTRP30414 1462 aaKnown RBP29.88■■■□□ 2.37
SMIM1-201ENST00000444870 HDGFP51858 240 aaKnown RBP29.87■■■□□ 2.37
SMIM1-201ENST00000444870 NUTM2DQ5VT03 806 aaPredicted RBP29.86■■■□□ 2.37
SMIM1-201ENST00000444870 C14orf37Q86TY3 774 aa29.86■■■□□ 2.37
SMIM1-201ENST00000444870 ANKRD50Q9ULJ7 1429 aa29.86■■■□□ 2.37
SMIM1-201ENST00000444870 RIMS2Q9UQ26 1411 aa29.85■■■□□ 2.37
SMIM1-201ENST00000444870 PLEKHG1Q9ULL1 1385 aa29.84■■■□□ 2.37
SMIM1-201ENST00000444870 NWD1Q149M9 1564 aa29.83■■■□□ 2.37
SMIM1-201ENST00000444870 ADGRL2O95490 1459 aa29.82■■■□□ 2.36
SMIM1-201ENST00000444870 ZFYVE9O95405 1425 aa29.81■■■□□ 2.36
SMIM1-201ENST00000444870 JCADQ9P266 1359 aa29.81■■■□□ 2.36
SMIM1-201ENST00000444870 RPRD2Q5VT52 1461 aaKnown RBP29.8■■■□□ 2.36
SMIM1-201ENST00000444870 TBX22Q9Y458 520 aa29.79■■■□□ 2.36
SMIM1-201ENST00000444870 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.76■■■□□ 2.35
SMIM1-201ENST00000444870 PHLPP1O60346 1717 aa29.76■■■□□ 2.35
SMIM1-201ENST00000444870 MEX3CQ5U5Q3 659 aaKnown RBP29.74■■■□□ 2.35
SMIM1-201ENST00000444870 MYO5BQ9ULV0 1848 aa29.71■■■□□ 2.35
SMIM1-201ENST00000444870 ATF3P18847 181 aa29.71■■■□□ 2.35
SMIM1-201ENST00000444870 GCC2Q8IWJ2 1684 aa29.71■■■□□ 2.35
SMIM1-201ENST00000444870 CHD2O14647 1828 aaKnown RBP29.7■■■□□ 2.34
SMIM1-201ENST00000444870 TMEM131LA2VDJ0 1609 aa29.7■■■□□ 2.34
SMIM1-201ENST00000444870 CADPS2Q86UW7 1296 aa29.69■■■□□ 2.34
SMIM1-201ENST00000444870 C19orf44Q9H6X5 657 aa29.69■■■□□ 2.34
SMIM1-201ENST00000444870 ADAMTS13Q76LX8 1427 aa29.67■■■□□ 2.34
SMIM1-201ENST00000444870 NCOA3Q9Y6Q9 1424 aa29.65■■■□□ 2.34
SMIM1-201ENST00000444870 TRIM52Q96A61 297 aa29.65■■■□□ 2.34
SMIM1-201ENST00000444870 AMOTL2Q9Y2J4 779 aa29.65■■■□□ 2.34
SMIM1-201ENST00000444870 SPATA31A6Q5VVP1 1343 aa29.65■■■□□ 2.34
SMIM1-201ENST00000444870 SETD1AO15047 1707 aaKnown RBP29.65■■■□□ 2.34
SMIM1-201ENST00000444870 COL16A1Q07092 1604 aaPredicted RBP29.63■■■□□ 2.33
SMIM1-201ENST00000444870 LRP6O75581 1613 aa29.63■■■□□ 2.33
SMIM1-201ENST00000444870 ITGAEP38570 1179 aa29.62■■■□□ 2.33
SMIM1-201ENST00000444870 NUTM2BA6NNL0 878 aaPredicted RBP29.61■■■□□ 2.33
SMIM1-201ENST00000444870 NUTM2EB1AL46 878 aaPredicted RBP29.61■■■□□ 2.33
SMIM1-201ENST00000444870 ZNF772Q68DY9 489 aaPredicted RBP29.61■■■□□ 2.33
SMIM1-201ENST00000444870 NUTM2AQ8IVF1 878 aaPredicted RBP29.61■■■□□ 2.33
SMIM1-201ENST00000444870 NUP155O75694 1391 aa29.6■■■□□ 2.33
SMIM1-201ENST00000444870 PIK3R4Q99570 1358 aa29.59■■■□□ 2.33
SMIM1-201ENST00000444870 UNC13BO14795 1591 aa29.58■■■□□ 2.33
SMIM1-201ENST00000444870 BRINP3Q76B58 766 aa29.57■■■□□ 2.32
SMIM1-201ENST00000444870 E9PCH4 1651 aa29.56■■■□□ 2.32
SMIM1-201ENST00000444870 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.56■■■□□ 2.32
SMIM1-201ENST00000444870 PTPRUQ92729 1446 aa29.55■■■□□ 2.32
SMIM1-201ENST00000444870 DIP2AQ14689 1571 aa29.53■■■□□ 2.32
SMIM1-201ENST00000444870 ZNF326Q5BKZ1 582 aaKnown RBP29.53■■■□□ 2.32
SMIM1-201ENST00000444870 UPF1Q92900 1129 aaKnown RBP eCLIP29.53■■■□□ 2.32
SMIM1-201ENST00000444870 ROCK1Q13464 1354 aa29.52■■■□□ 2.32
SMIM1-201ENST00000444870 TRPM2O94759 1503 aa29.51■■■□□ 2.32
SMIM1-201ENST00000444870 RXRBP28702 533 aa29.51■■■□□ 2.31
SMIM1-201ENST00000444870 AHDC1Q5TGY3 1603 aaPredicted RBP29.51■■■□□ 2.31
SMIM1-201ENST00000444870 IQGAP3Q86VI3 1631 aa29.47■■■□□ 2.31
SMIM1-201ENST00000444870 PPARGC1BQ86YN6 1023 aaKnown RBP29.47■■■□□ 2.31
SMIM1-201ENST00000444870 DDX17Q92841 729 aaKnown RBP29.44■■■□□ 2.3
SMIM1-201ENST00000444870 AFF2P51816 1311 aa29.44■■■□□ 2.3
SMIM1-201ENST00000444870 SHPRHQ149N8 1683 aa29.43■■■□□ 2.3
SMIM1-201ENST00000444870 METP08581 1390 aa29.41■■■□□ 2.3
SMIM1-201ENST00000444870 LRRC59Q96AG4 307 aaKnown RBP29.4■■■□□ 2.3
SMIM1-201ENST00000444870 ASXL1Q8IXJ9 1541 aa29.4■■■□□ 2.3
SMIM1-201ENST00000444870 DCCP43146 1447 aa29.39■■■□□ 2.3
SMIM1-201ENST00000444870 MST1RQ04912 1400 aa29.39■■■□□ 2.3
SMIM1-201ENST00000444870 C8orf37Q96NL8 207 aa29.39■■■□□ 2.3
SMIM1-201ENST00000444870 SETD5Q9C0A6 1442 aa29.36■■■□□ 2.29
SMIM1-201ENST00000444870 NRXN3Q9Y4C0 1643 aa29.34■■■□□ 2.29
SMIM1-201ENST00000444870 QTRT2Q9H974 415 aaKnown RBP29.33■■■□□ 2.29
SMIM1-201ENST00000444870 SETBP1Q9Y6X0 1596 aa29.33■■■□□ 2.29
SMIM1-201ENST00000444870 XRN1Q8IZH2 1706 aaKnown RBP29.32■■■□□ 2.28
SMIM1-201ENST00000444870 ADAMTS2O95450 1211 aa29.31■■■□□ 2.28
SMIM1-201ENST00000444870 ADGRL3Q9HAR2 1447 aa29.29■■■□□ 2.28
SMIM1-201ENST00000444870 PNPLA6Q8IY17 1366 aa29.28■■■□□ 2.28
SMIM1-201ENST00000444870 NGLY1Q96IV0 654 aa29.28■■■□□ 2.28
SMIM1-201ENST00000444870 RBM6P78332 1123 aaKnown RBP29.27■■■□□ 2.28
SMIM1-201ENST00000444870 CDK12Q9NYV4 1490 aaPredicted RBP29.27■■■□□ 2.28
SMIM1-201ENST00000444870 SPHKAPQ2M3C7 1700 aa29.26■■■□□ 2.27
SMIM1-201ENST00000444870 NHSL1Q5SYE7 1610 aa29.24■■■□□ 2.27
SMIM1-201ENST00000444870 ORAI2Q96SN7 254 aa29.23■■■□□ 2.27
SMIM1-201ENST00000444870 RGS12O14924 1447 aa29.22■■■□□ 2.27
SMIM1-201ENST00000444870 C1orf167Q5SNV9 1468 aa29.21■■■□□ 2.27
SMIM1-201ENST00000444870 NEXMIFQ5QGS0 1516 aa29.2■■■□□ 2.27
SMIM1-201ENST00000444870 CLTCL1P53675 1640 aa29.2■■■□□ 2.26
SMIM1-201ENST00000444870 VGFO15240 615 aaPredicted RBP29.17■■■□□ 2.26
SMIM1-201ENST00000444870 NALCNQ8IZF0 1738 aa29.17■■■□□ 2.26
SMIM1-201ENST00000444870 ROBO2Q9HCK4 1378 aa29.16■■■□□ 2.26
SMIM1-201ENST00000444870 USP21Q9UK80 565 aa29.15■■■□□ 2.26
SMIM1-201ENST00000444870 SOS2Q07890 1332 aaPredicted RBP29.13■■■□□ 2.25
SMIM1-201ENST00000444870 TRPC5Q9UL62 973 aaPredicted RBP29.09■■■□□ 2.25
SMIM1-201ENST00000444870 PTCH1Q13635 1447 aa29.09■■■□□ 2.25
SMIM1-201ENST00000444870 NAIPQ13075 1403 aa29.07■■■□□ 2.24
SMIM1-201ENST00000444870 ESCO1Q5FWF5 840 aa29.07■■■□□ 2.24
SMIM1-201ENST00000444870 SLC4A1APQ9BWU0 796 aaKnown RBP29.06■■■□□ 2.24
SMIM1-201ENST00000444870 KIF1BO60333 1816 aa29.06■■■□□ 2.24
SMIM1-201ENST00000444870 ATAD2Q6PL18 1390 aa29.04■■■□□ 2.24
SMIM1-201ENST00000444870 RPGRIP1LQ68CZ1 1315 aa29.04■■■□□ 2.24
SMIM1-201ENST00000444870 XPCQ01831 940 aaPredicted RBP29.04■■■□□ 2.24
SMIM1-201ENST00000444870 FNBP4Q8N3X1 1017 aaPredicted RBP29.03■■■□□ 2.24
SMIM1-201ENST00000444870 NUTM2FA1L443 756 aa29.02■■■□□ 2.24
SMIM1-201ENST00000444870 FOXO3O43524 673 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms