RNA–Protein interactions for RNA: ENST00000444870.6

SMIM1-201, Transcript of small integral membrane protein 1 (Vel blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM1, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1-201ENST00000444870 ROBO1Q9Y6N7 1651 aa29.93■■■□□ 2.38
SMIM1-201ENST00000444870 SLAIN2Q9P270 581 aa29.93■■■□□ 2.38
SMIM1-201ENST00000444870 KDM5AP29375 1690 aaKnown RBP29.91■■■□□ 2.38
SMIM1-201ENST00000444870 CHGAP10645 457 aaKnown RBP29.9■■■□□ 2.38
SMIM1-201ENST00000444870 NKTRP30414 1462 aaKnown RBP29.88■■■□□ 2.37
SMIM1-201ENST00000444870 HDGFP51858 240 aaKnown RBP29.87■■■□□ 2.37
SMIM1-201ENST00000444870 NUTM2DQ5VT03 806 aaPredicted RBP29.86■■■□□ 2.37
SMIM1-201ENST00000444870 C14orf37Q86TY3 774 aa29.86■■■□□ 2.37
SMIM1-201ENST00000444870 ANKRD50Q9ULJ7 1429 aa29.86■■■□□ 2.37
SMIM1-201ENST00000444870 RIMS2Q9UQ26 1411 aa29.85■■■□□ 2.37
SMIM1-201ENST00000444870 PLEKHG1Q9ULL1 1385 aa29.84■■■□□ 2.37
SMIM1-201ENST00000444870 NWD1Q149M9 1564 aa29.83■■■□□ 2.37
SMIM1-201ENST00000444870 ADGRL2O95490 1459 aa29.82■■■□□ 2.36
SMIM1-201ENST00000444870 ZFYVE9O95405 1425 aa29.81■■■□□ 2.36
SMIM1-201ENST00000444870 JCADQ9P266 1359 aa29.81■■■□□ 2.36
SMIM1-201ENST00000444870 RPRD2Q5VT52 1461 aaKnown RBP29.8■■■□□ 2.36
SMIM1-201ENST00000444870 TBX22Q9Y458 520 aa29.79■■■□□ 2.36
SMIM1-201ENST00000444870 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.76■■■□□ 2.35
SMIM1-201ENST00000444870 PHLPP1O60346 1717 aa29.76■■■□□ 2.35
SMIM1-201ENST00000444870 MEX3CQ5U5Q3 659 aaKnown RBP29.74■■■□□ 2.35
SMIM1-201ENST00000444870 MYO5BQ9ULV0 1848 aa29.71■■■□□ 2.35
SMIM1-201ENST00000444870 ATF3P18847 181 aa29.71■■■□□ 2.35
SMIM1-201ENST00000444870 GCC2Q8IWJ2 1684 aa29.71■■■□□ 2.35
SMIM1-201ENST00000444870 CHD2O14647 1828 aaKnown RBP29.7■■■□□ 2.34
SMIM1-201ENST00000444870 TMEM131LA2VDJ0 1609 aa29.7■■■□□ 2.34
SMIM1-201ENST00000444870 CADPS2Q86UW7 1296 aa29.69■■■□□ 2.34
SMIM1-201ENST00000444870 C19orf44Q9H6X5 657 aa29.69■■■□□ 2.34
SMIM1-201ENST00000444870 ADAMTS13Q76LX8 1427 aa29.67■■■□□ 2.34
SMIM1-201ENST00000444870 NCOA3Q9Y6Q9 1424 aa29.65■■■□□ 2.34
SMIM1-201ENST00000444870 TRIM52Q96A61 297 aa29.65■■■□□ 2.34
SMIM1-201ENST00000444870 AMOTL2Q9Y2J4 779 aa29.65■■■□□ 2.34
SMIM1-201ENST00000444870 SPATA31A6Q5VVP1 1343 aa29.65■■■□□ 2.34
SMIM1-201ENST00000444870 SETD1AO15047 1707 aaKnown RBP29.65■■■□□ 2.34
SMIM1-201ENST00000444870 COL16A1Q07092 1604 aaPredicted RBP29.63■■■□□ 2.33
SMIM1-201ENST00000444870 LRP6O75581 1613 aa29.63■■■□□ 2.33
SMIM1-201ENST00000444870 ITGAEP38570 1179 aa29.62■■■□□ 2.33
SMIM1-201ENST00000444870 NUTM2BA6NNL0 878 aaPredicted RBP29.61■■■□□ 2.33
SMIM1-201ENST00000444870 NUTM2EB1AL46 878 aaPredicted RBP29.61■■■□□ 2.33
SMIM1-201ENST00000444870 ZNF772Q68DY9 489 aaPredicted RBP29.61■■■□□ 2.33
SMIM1-201ENST00000444870 NUTM2AQ8IVF1 878 aaPredicted RBP29.61■■■□□ 2.33
SMIM1-201ENST00000444870 NUP155O75694 1391 aa29.6■■■□□ 2.33
SMIM1-201ENST00000444870 PIK3R4Q99570 1358 aa29.59■■■□□ 2.33
SMIM1-201ENST00000444870 UNC13BO14795 1591 aa29.58■■■□□ 2.33
SMIM1-201ENST00000444870 BRINP3Q76B58 766 aa29.57■■■□□ 2.32
SMIM1-201ENST00000444870 E9PCH4 1651 aa29.56■■■□□ 2.32
SMIM1-201ENST00000444870 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.56■■■□□ 2.32
SMIM1-201ENST00000444870 PTPRUQ92729 1446 aa29.55■■■□□ 2.32
SMIM1-201ENST00000444870 DIP2AQ14689 1571 aa29.53■■■□□ 2.32
SMIM1-201ENST00000444870 ZNF326Q5BKZ1 582 aaKnown RBP29.53■■■□□ 2.32
SMIM1-201ENST00000444870 UPF1Q92900 1129 aaKnown RBP eCLIP29.53■■■□□ 2.32
SMIM1-201ENST00000444870 ROCK1Q13464 1354 aa29.52■■■□□ 2.32
SMIM1-201ENST00000444870 TRPM2O94759 1503 aa29.51■■■□□ 2.32
SMIM1-201ENST00000444870 RXRBP28702 533 aa29.51■■■□□ 2.31
SMIM1-201ENST00000444870 AHDC1Q5TGY3 1603 aaPredicted RBP29.51■■■□□ 2.31
SMIM1-201ENST00000444870 IQGAP3Q86VI3 1631 aa29.47■■■□□ 2.31
SMIM1-201ENST00000444870 PPARGC1BQ86YN6 1023 aaKnown RBP29.47■■■□□ 2.31
SMIM1-201ENST00000444870 DDX17Q92841 729 aaKnown RBP29.44■■■□□ 2.3
SMIM1-201ENST00000444870 AFF2P51816 1311 aa29.44■■■□□ 2.3
SMIM1-201ENST00000444870 SHPRHQ149N8 1683 aa29.43■■■□□ 2.3
SMIM1-201ENST00000444870 METP08581 1390 aa29.41■■■□□ 2.3
SMIM1-201ENST00000444870 LRRC59Q96AG4 307 aaKnown RBP29.4■■■□□ 2.3
SMIM1-201ENST00000444870 ASXL1Q8IXJ9 1541 aa29.4■■■□□ 2.3
SMIM1-201ENST00000444870 DCCP43146 1447 aa29.39■■■□□ 2.3
SMIM1-201ENST00000444870 MST1RQ04912 1400 aa29.39■■■□□ 2.3
SMIM1-201ENST00000444870 C8orf37Q96NL8 207 aa29.39■■■□□ 2.3
SMIM1-201ENST00000444870 SETD5Q9C0A6 1442 aa29.36■■■□□ 2.29
SMIM1-201ENST00000444870 NRXN3Q9Y4C0 1643 aa29.34■■■□□ 2.29
SMIM1-201ENST00000444870 QTRT2Q9H974 415 aaKnown RBP29.33■■■□□ 2.29
SMIM1-201ENST00000444870 SETBP1Q9Y6X0 1596 aa29.33■■■□□ 2.29
SMIM1-201ENST00000444870 XRN1Q8IZH2 1706 aaKnown RBP29.32■■■□□ 2.28
SMIM1-201ENST00000444870 ADAMTS2O95450 1211 aa29.31■■■□□ 2.28
SMIM1-201ENST00000444870 ADGRL3Q9HAR2 1447 aa29.29■■■□□ 2.28
SMIM1-201ENST00000444870 PNPLA6Q8IY17 1366 aa29.28■■■□□ 2.28
SMIM1-201ENST00000444870 NGLY1Q96IV0 654 aa29.28■■■□□ 2.28
SMIM1-201ENST00000444870 RBM6P78332 1123 aaKnown RBP29.27■■■□□ 2.28
SMIM1-201ENST00000444870 CDK12Q9NYV4 1490 aaPredicted RBP29.27■■■□□ 2.28
SMIM1-201ENST00000444870 SPHKAPQ2M3C7 1700 aa29.26■■■□□ 2.27
SMIM1-201ENST00000444870 NHSL1Q5SYE7 1610 aa29.24■■■□□ 2.27
SMIM1-201ENST00000444870 ORAI2Q96SN7 254 aa29.23■■■□□ 2.27
SMIM1-201ENST00000444870 RGS12O14924 1447 aa29.22■■■□□ 2.27
SMIM1-201ENST00000444870 C1orf167Q5SNV9 1468 aa29.21■■■□□ 2.27
SMIM1-201ENST00000444870 NEXMIFQ5QGS0 1516 aa29.2■■■□□ 2.27
SMIM1-201ENST00000444870 CLTCL1P53675 1640 aa29.2■■■□□ 2.26
SMIM1-201ENST00000444870 VGFO15240 615 aaPredicted RBP29.17■■■□□ 2.26
SMIM1-201ENST00000444870 NALCNQ8IZF0 1738 aa29.17■■■□□ 2.26
SMIM1-201ENST00000444870 ROBO2Q9HCK4 1378 aa29.16■■■□□ 2.26
SMIM1-201ENST00000444870 USP21Q9UK80 565 aa29.15■■■□□ 2.26
SMIM1-201ENST00000444870 SOS2Q07890 1332 aaPredicted RBP29.13■■■□□ 2.25
SMIM1-201ENST00000444870 TRPC5Q9UL62 973 aaPredicted RBP29.09■■■□□ 2.25
SMIM1-201ENST00000444870 PTCH1Q13635 1447 aa29.09■■■□□ 2.25
SMIM1-201ENST00000444870 NAIPQ13075 1403 aa29.07■■■□□ 2.24
SMIM1-201ENST00000444870 ESCO1Q5FWF5 840 aa29.07■■■□□ 2.24
SMIM1-201ENST00000444870 SLC4A1APQ9BWU0 796 aaKnown RBP29.06■■■□□ 2.24
SMIM1-201ENST00000444870 KIF1BO60333 1816 aa29.06■■■□□ 2.24
SMIM1-201ENST00000444870 ATAD2Q6PL18 1390 aa29.04■■■□□ 2.24
SMIM1-201ENST00000444870 RPGRIP1LQ68CZ1 1315 aa29.04■■■□□ 2.24
SMIM1-201ENST00000444870 XPCQ01831 940 aaPredicted RBP29.04■■■□□ 2.24
SMIM1-201ENST00000444870 FNBP4Q8N3X1 1017 aaPredicted RBP29.03■■■□□ 2.24
SMIM1-201ENST00000444870 NUTM2FA1L443 756 aa29.02■■■□□ 2.24
SMIM1-201ENST00000444870 FOXO3O43524 673 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms