RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 NKTRP30414 1462 aaKnown RBP24.89■■□□□ 1.58
CTDSP1-204ENST00000443891 RIMS2Q9UQ26 1411 aa24.89■■□□□ 1.58
CTDSP1-204ENST00000443891 TMEM131LA2VDJ0 1609 aa24.88■■□□□ 1.57
CTDSP1-204ENST00000443891 PPP1R15AO75807 674 aaPredicted RBP24.88■■□□□ 1.57
CTDSP1-204ENST00000443891 TMEM94Q12767 1356 aa24.88■■□□□ 1.57
CTDSP1-204ENST00000443891 PROSER2Q86WR7 435 aaPredicted RBP24.87■■□□□ 1.57
CTDSP1-204ENST00000443891 BCANQ96GW7 911 aa24.87■■□□□ 1.57
CTDSP1-204ENST00000443891 FAM135BQ49AJ0 1406 aa24.86■■□□□ 1.57
CTDSP1-204ENST00000443891 NWD1Q149M9 1564 aa24.86■■□□□ 1.57
CTDSP1-204ENST00000443891 TBX22Q9Y458 520 aa24.86■■□□□ 1.57
CTDSP1-204ENST00000443891 E9PCH4 1651 aa24.85■■□□□ 1.57
CTDSP1-204ENST00000443891 MED1Q15648 1581 aaPredicted RBP24.85■■□□□ 1.57
CTDSP1-204ENST00000443891 ITGAEP38570 1179 aa24.85■■□□□ 1.57
CTDSP1-204ENST00000443891 XIRP1Q702N8 1843 aaKnown RBP24.84■■□□□ 1.57
CTDSP1-204ENST00000443891 RRBP1Q9P2E9 1410 aaKnown RBP24.83■■□□□ 1.57
CTDSP1-204ENST00000443891 NCOA3Q9Y6Q9 1424 aa24.81■■□□□ 1.56
CTDSP1-204ENST00000443891 CHGAP10645 457 aaKnown RBP24.81■■□□□ 1.56
CTDSP1-204ENST00000443891 PIK3R4Q99570 1358 aa24.8■■□□□ 1.56
CTDSP1-204ENST00000443891 MSH6P52701 1360 aa24.79■■□□□ 1.56
CTDSP1-204ENST00000443891 PPARGC1BQ86YN6 1023 aaKnown RBP24.78■■□□□ 1.56
CTDSP1-204ENST00000443891 DIP2AQ14689 1571 aa24.78■■□□□ 1.56
CTDSP1-204ENST00000443891 MYO5BQ9ULV0 1848 aa24.77■■□□□ 1.56
CTDSP1-204ENST00000443891 PHF23Q9BUL5 403 aaPredicted RBP24.75■■□□□ 1.55
CTDSP1-204ENST00000443891 ADAMTS13Q76LX8 1427 aa24.74■■□□□ 1.55
CTDSP1-204ENST00000443891 CHD2O14647 1828 aaKnown RBP24.74■■□□□ 1.55
CTDSP1-204ENST00000443891 NAIPQ13075 1403 aa24.69■■□□□ 1.54
CTDSP1-204ENST00000443891 SLAIN2Q9P270 581 aa24.69■■□□□ 1.54
CTDSP1-204ENST00000443891 RBM33Q96EV2 1170 aaKnown RBP24.68■■□□□ 1.54
CTDSP1-204ENST00000443891 TRPM2O94759 1503 aa24.67■■□□□ 1.54
CTDSP1-204ENST00000443891 SENP3Q9H4L4 574 aaPredicted RBP24.67■■□□□ 1.54
CTDSP1-204ENST00000443891 SPHKAPQ2M3C7 1700 aa24.66■■□□□ 1.54
CTDSP1-204ENST00000443891 NUTM2DQ5VT03 806 aaPredicted RBP24.66■■□□□ 1.54
CTDSP1-204ENST00000443891 ROBO1Q9Y6N7 1651 aa24.66■■□□□ 1.54
CTDSP1-204ENST00000443891 C19orf44Q9H6X5 657 aa24.65■■□□□ 1.54
CTDSP1-204ENST00000443891 HFM1A2PYH4 1435 aa24.64■■□□□ 1.54
CTDSP1-204ENST00000443891 CADPS2Q86UW7 1296 aa24.64■■□□□ 1.54
CTDSP1-204ENST00000443891 ZNF326Q5BKZ1 582 aaKnown RBP24.62■■□□□ 1.53
CTDSP1-204ENST00000443891 AMOTL2Q9Y2J4 779 aa24.62■■□□□ 1.53
CTDSP1-204ENST00000443891 SETBP1Q9Y6X0 1596 aa24.62■■□□□ 1.53
CTDSP1-204ENST00000443891 C14orf37Q86TY3 774 aa24.61■■□□□ 1.53
CTDSP1-204ENST00000443891 ATF3P18847 181 aa24.59■■□□□ 1.53
CTDSP1-204ENST00000443891 DCCP43146 1447 aa24.57■■□□□ 1.52
CTDSP1-204ENST00000443891 PTPRUQ92729 1446 aa24.56■■□□□ 1.52
CTDSP1-204ENST00000443891 TRIM52Q96A61 297 aa24.56■■□□□ 1.52
CTDSP1-204ENST00000443891 JCADQ9P266 1359 aa24.55■■□□□ 1.52
CTDSP1-204ENST00000443891 CLTCL1P53675 1640 aa24.54■■□□□ 1.52
CTDSP1-204ENST00000443891 NRXN3Q9Y4C0 1643 aa24.53■■□□□ 1.52
CTDSP1-204ENST00000443891 VGFO15240 615 aaPredicted RBP24.53■■□□□ 1.52
CTDSP1-204ENST00000443891 RPGRIP1LQ68CZ1 1315 aa24.53■■□□□ 1.52
CTDSP1-204ENST00000443891 NEXMIFQ5QGS0 1516 aa24.52■■□□□ 1.52
CTDSP1-204ENST00000443891 SLC4A1APQ9BWU0 796 aaKnown RBP24.52■■□□□ 1.52
CTDSP1-204ENST00000443891 ACIN1Q9UKV3 1341 aaKnown RBP24.52■■□□□ 1.52
CTDSP1-204ENST00000443891 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.52■■□□□ 1.52
CTDSP1-204ENST00000443891 RGS17Q9UGC6 210 aaPredicted RBP24.51■■□□□ 1.51
CTDSP1-204ENST00000443891 XRN1Q8IZH2 1706 aaKnown RBP24.51■■□□□ 1.51
CTDSP1-204ENST00000443891 PHLPP1O60346 1717 aa24.5■■□□□ 1.51
CTDSP1-204ENST00000443891 KIF1BO60333 1816 aa24.49■■□□□ 1.51
CTDSP1-204ENST00000443891 METP08581 1390 aa24.49■■□□□ 1.51
CTDSP1-204ENST00000443891 AHDC1Q5TGY3 1603 aaPredicted RBP24.47■■□□□ 1.51
CTDSP1-204ENST00000443891 SPATA31A6Q5VVP1 1343 aa24.47■■□□□ 1.51
CTDSP1-204ENST00000443891 COL16A1Q07092 1604 aaPredicted RBP24.46■■□□□ 1.51
CTDSP1-204ENST00000443891 BRINP3Q76B58 766 aa24.43■■□□□ 1.5
CTDSP1-204ENST00000443891 ADGRL3Q9HAR2 1447 aa24.43■■□□□ 1.5
CTDSP1-204ENST00000443891 PTCH1Q13635 1447 aa24.41■■□□□ 1.5
CTDSP1-204ENST00000443891 PRAG1Q86YV5 1406 aa24.41■■□□□ 1.5
CTDSP1-204ENST00000443891 MST1RQ04912 1400 aa24.4■■□□□ 1.5
CTDSP1-204ENST00000443891 POTEAQ6S8J7 498 aa24.37■■□□□ 1.49
CTDSP1-204ENST00000443891 CCDC144AA2RUR9 1427 aa24.35■■□□□ 1.49
CTDSP1-204ENST00000443891 ASXL1Q8IXJ9 1541 aa24.35■■□□□ 1.49
CTDSP1-204ENST00000443891 SETD5Q9C0A6 1442 aa24.35■■□□□ 1.49
CTDSP1-204ENST00000443891 SHPRHQ149N8 1683 aa24.34■■□□□ 1.49
CTDSP1-204ENST00000443891 MPHOSPH9Q99550 1183 aa24.34■■□□□ 1.49
CTDSP1-204ENST00000443891 LRRC59Q96AG4 307 aaKnown RBP24.33■■□□□ 1.49
CTDSP1-204ENST00000443891 ANKRD30BQ9BXX2 1392 aa24.32■■□□□ 1.48
CTDSP1-204ENST00000443891 SETD1AO15047 1707 aaKnown RBP24.31■■□□□ 1.48
CTDSP1-204ENST00000443891 ZNF772Q68DY9 489 aaPredicted RBP24.31■■□□□ 1.48
CTDSP1-204ENST00000443891 PPLO60437 1756 aa24.31■■□□□ 1.48
CTDSP1-204ENST00000443891 MEX3CQ5U5Q3 659 aaKnown RBP24.3■■□□□ 1.48
CTDSP1-204ENST00000443891 ROBO2Q9HCK4 1378 aa24.29■■□□□ 1.48
CTDSP1-204ENST00000443891 LRP6O75581 1613 aa24.28■■□□□ 1.48
CTDSP1-204ENST00000443891 NHSL1Q5SYE7 1610 aa24.28■■□□□ 1.48
CTDSP1-204ENST00000443891 SPATA31E1Q6ZUB1 1445 aa24.28■■□□□ 1.48
CTDSP1-204ENST00000443891 FOXD1Q16676 465 aa24.28■■□□□ 1.48
CTDSP1-204ENST00000443891 NALCNQ8IZF0 1738 aa24.27■■□□□ 1.48
CTDSP1-204ENST00000443891 C1orf167Q5SNV9 1468 aa24.27■■□□□ 1.48
CTDSP1-204ENST00000443891 ADGRF5Q8IZF2 1346 aa24.23■■□□□ 1.47
CTDSP1-204ENST00000443891 RGL3Q3MIN7 710 aa24.22■■□□□ 1.47
CTDSP1-204ENST00000443891 LAMC1P11047 1609 aa24.21■■□□□ 1.47
CTDSP1-204ENST00000443891 TECPR2O15040 1411 aa24.21■■□□□ 1.47
CTDSP1-204ENST00000443891 LRPPRCP42704 1394 aaKnown RBP24.19■■□□□ 1.46
CTDSP1-204ENST00000443891 PNPLA6Q8IY17 1366 aa24.19■■□□□ 1.46
CTDSP1-204ENST00000443891 ABCC11Q96J66 1382 aa24.19■■□□□ 1.46
CTDSP1-204ENST00000443891 SOS2Q07890 1332 aaPredicted RBP24.19■■□□□ 1.46
CTDSP1-204ENST00000443891 NUTM2BA6NNL0 878 aaPredicted RBP24.18■■□□□ 1.46
CTDSP1-204ENST00000443891 NUTM2EB1AL46 878 aaPredicted RBP24.18■■□□□ 1.46
CTDSP1-204ENST00000443891 NUTM2AQ8IVF1 878 aaPredicted RBP24.18■■□□□ 1.46
CTDSP1-204ENST00000443891 PIK3C2GO75747 1445 aa24.18■■□□□ 1.46
CTDSP1-204ENST00000443891 SIRT1Q96EB6 747 aa24.17■■□□□ 1.46
CTDSP1-204ENST00000443891 CDC42BPGQ6DT37 1551 aa24.16■■□□□ 1.46
CTDSP1-204ENST00000443891 IFT172Q9UG01 1749 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 210 ms