RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 HECW1Q76N89 1606 aa28.05■■■□□ 2.08
CTDSPL-206ENST00000443503 ANKRD45Q5TZF3 282 aa28.03■■■□□ 2.08
CTDSPL-206ENST00000443503 KIAA0586Q9BVV6 1533 aa28.03■■■□□ 2.08
CTDSPL-206ENST00000443503 PCF11O94913 1555 aaKnown RBP28.02■■■□□ 2.08
CTDSPL-206ENST00000443503 MTHFSP49914 203 aa28.01■■■□□ 2.07
CTDSPL-206ENST00000443503 FOXD4L1Q9NU39 408 aa28.01■■■□□ 2.07
CTDSPL-206ENST00000443503 PPP2R1AP30153 589 aa28■■■□□ 2.07
CTDSPL-206ENST00000443503 DZIP1LQ8IYY4 767 aaKnown RBP27.99■■■□□ 2.07
CTDSPL-206ENST00000443503 SUPT6HQ7KZ85 1726 aaKnown RBP27.98■■■□□ 2.07
CTDSPL-206ENST00000443503 FANCIQ9NVI1 1328 aa27.98■■■□□ 2.07
CTDSPL-206ENST00000443503 PNISRQ8TF01 805 aaKnown RBP27.97■■■□□ 2.07
CTDSPL-206ENST00000443503 SCAPERQ9BY12 1400 aa27.97■■■□□ 2.07
CTDSPL-206ENST00000443503 DDX19BQ9UMR2 479 aa27.96■■■□□ 2.07
CTDSPL-206ENST00000443503 HMOX1P09601 288 aa27.95■■■□□ 2.07
CTDSPL-206ENST00000443503 HDAC5Q9UQL6 1122 aa27.95■■■□□ 2.07
CTDSPL-206ENST00000443503 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
CTDSPL-206ENST00000443503 CHMP3Q9Y3E7 222 aa27.94■■■□□ 2.06
CTDSPL-206ENST00000443503 TCP11L2Q8N4U5 519 aa27.93■■■□□ 2.06
CTDSPL-206ENST00000443503 PANK1Q8TE04 598 aa27.93■■■□□ 2.06
CTDSPL-206ENST00000443503 NOL8Q76FK4 1167 aaKnown RBP27.93■■■□□ 2.06
CTDSPL-206ENST00000443503 SLC12A5Q9H2X9 1139 aa27.93■■■□□ 2.06
CTDSPL-206ENST00000443503 ROCK1Q13464 1354 aa27.9■■■□□ 2.06
CTDSPL-206ENST00000443503 IQGAP2Q13576 1575 aa27.9■■■□□ 2.06
CTDSPL-206ENST00000443503 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.89■■■□□ 2.06
CTDSPL-206ENST00000443503 TEFQ10587 303 aa27.88■■■□□ 2.05
CTDSPL-206ENST00000443503 PLEKHH2Q8IVE3 1493 aa27.88■■■□□ 2.05
CTDSPL-206ENST00000443503 GPATCH3Q96I76 525 aa27.87■■■□□ 2.05
CTDSPL-206ENST00000443503 C11orf95C9JLR9 678 aaPredicted RBP27.87■■■□□ 2.05
CTDSPL-206ENST00000443503 CDK11BP21127 795 aaKnown RBP27.86■■■□□ 2.05
CTDSPL-206ENST00000443503 PLB1Q6P1J6 1458 aa27.86■■■□□ 2.05
CTDSPL-206ENST00000443503 MAP3K1Q13233 1512 aa27.85■■■□□ 2.05
CTDSPL-206ENST00000443503 GORABQ5T7V8 394 aa27.85■■■□□ 2.05
CTDSPL-206ENST00000443503 ANKRD30BQ9BXX2 1392 aa27.85■■■□□ 2.05
CTDSPL-206ENST00000443503 MSNP26038 577 aaKnown RBP27.85■■■□□ 2.05
CTDSPL-206ENST00000443503 API5Q9BZZ5 524 aaKnown RBP27.85■■■□□ 2.05
CTDSPL-206ENST00000443503 AKNAQ7Z591 1439 aa27.85■■■□□ 2.05
CTDSPL-206ENST00000443503 NECTIN2Q92692 538 aa27.84■■■□□ 2.05
CTDSPL-206ENST00000443503 LAMC3Q9Y6N6 1575 aa27.84■■■□□ 2.05
CTDSPL-206ENST00000443503 PTMSP20962 102 aa27.84■■■□□ 2.05
CTDSPL-206ENST00000443503 ARHGEF11O15085 1522 aa27.83■■■□□ 2.05
CTDSPL-206ENST00000443503 RILPL2Q969X0 211 aa27.82■■■□□ 2.04
CTDSPL-206ENST00000443503 ABCC5O15440 1437 aa27.82■■■□□ 2.04
CTDSPL-206ENST00000443503 ST18O60284 1047 aa27.82■■■□□ 2.04
CTDSPL-206ENST00000443503 EIF2S2P20042 333 aaKnown RBP27.82■■■□□ 2.04
CTDSPL-206ENST00000443503 GNAI1P63096 354 aa27.82■■■□□ 2.04
CTDSPL-206ENST00000443503 KIF16BQ96L93 1317 aa27.82■■■□□ 2.04
CTDSPL-206ENST00000443503 RAPGEF3O95398 923 aa27.81■■■□□ 2.04
CTDSPL-206ENST00000443503 PRAM1Q96QH2 718 aa27.81■■■□□ 2.04
CTDSPL-206ENST00000443503 USP35Q9P2H5 1018 aa27.81■■■□□ 2.04
CTDSPL-206ENST00000443503 GOLGA6L3A6NEY3 463 aa27.81■■■□□ 2.04
CTDSPL-206ENST00000443503 C1orf141Q5JVX7 400 aa27.8■■■□□ 2.04
CTDSPL-206ENST00000443503 TAF7LQ5H9L4 462 aa27.79■■■□□ 2.04
CTDSPL-206ENST00000443503 LNPKQ9C0E8 428 aa27.79■■■□□ 2.04
CTDSPL-206ENST00000443503 CUL7Q14999 1698 aa27.78■■■□□ 2.04
CTDSPL-206ENST00000443503 URB2Q14146 1524 aaKnown RBP27.77■■■□□ 2.04
CTDSPL-206ENST00000443503 ERBINQ96RT1 1412 aa27.77■■■□□ 2.04
CTDSPL-206ENST00000443503 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.03
CTDSPL-206ENST00000443503 FOXD4L5Q5VV16 416 aaPredicted RBP27.76■■■□□ 2.03
CTDSPL-206ENST00000443503 FOXD4L4Q8WXT5 416 aaPredicted RBP27.76■■■□□ 2.03
CTDSPL-206ENST00000443503 GOLGA6L6A8MZA4 724 aa27.75■■■□□ 2.03
CTDSPL-206ENST00000443503 FKBP5Q13451 457 aaPredicted RBP27.75■■■□□ 2.03
CTDSPL-206ENST00000443503 PTPN23Q9H3S7 1636 aa27.75■■■□□ 2.03
CTDSPL-206ENST00000443503 NRDCO43847 1150 aa27.75■■■□□ 2.03
CTDSPL-206ENST00000443503 PSME1Q06323 249 aa27.74■■■□□ 2.03
CTDSPL-206ENST00000443503 GNL2Q13823 731 aaKnown RBP27.74■■■□□ 2.03
CTDSPL-206ENST00000443503 DRC7Q8IY82 874 aa27.73■■■□□ 2.03
CTDSPL-206ENST00000443503 CAMSAP2Q08AD1 1489 aa27.73■■■□□ 2.03
CTDSPL-206ENST00000443503 PRKAR2BP31323 418 aa27.72■■■□□ 2.03
CTDSPL-206ENST00000443503 NUTM2GQ5VZR2 741 aa27.72■■■□□ 2.03
CTDSPL-206ENST00000443503 TSPYL4Q9UJ04 414 aa27.72■■■□□ 2.03
CTDSPL-206ENST00000443503 BIVM-ERCC5R4GMW8 1640 aa27.72■■■□□ 2.03
CTDSPL-206ENST00000443503 SYAP1Q96A49 352 aaPredicted RBP27.71■■■□□ 2.03
CTDSPL-206ENST00000443503 BCAR3O75815 825 aa27.71■■■□□ 2.03
CTDSPL-206ENST00000443503 CCDC9Q9Y3X0 531 aaKnown RBP27.71■■■□□ 2.03
CTDSPL-206ENST00000443503 EXOSC9Q06265 439 aaKnown RBP27.71■■■□□ 2.03
CTDSPL-206ENST00000443503 SLC52A1Q9NWF4 448 aa27.7■■■□□ 2.03
CTDSPL-206ENST00000443503 GRIN2AQ12879 1464 aa27.7■■■□□ 2.03
CTDSPL-206ENST00000443503 CCDC141Q6ZP82 1450 aa27.7■■■□□ 2.03
CTDSPL-206ENST00000443503 NCOA1Q15788 1441 aa27.7■■■□□ 2.02
CTDSPL-206ENST00000443503 NLRP6P59044 892 aa27.69■■■□□ 2.02
CTDSPL-206ENST00000443503 TXNDC2Q86VQ3 553 aa27.69■■■□□ 2.02
CTDSPL-206ENST00000443503 TULP1O00294 542 aaPredicted RBP27.68■■■□□ 2.02
CTDSPL-206ENST00000443503 C9orf78Q9NZ63 289 aaPredicted RBP27.68■■■□□ 2.02
CTDSPL-206ENST00000443503 CABP1Q9NZU7 370 aa27.68■■■□□ 2.02
CTDSPL-206ENST00000443503 HSP90B1P14625 803 aaKnown RBP27.67■■■□□ 2.02
CTDSPL-206ENST00000443503 TSR2Q969E8 191 aaKnown RBP27.67■■■□□ 2.02
CTDSPL-206ENST00000443503 AAMPQ13685 434 aa27.66■■■□□ 2.02
CTDSPL-206ENST00000443503 ZNF608Q9ULD9 1512 aaPredicted RBP27.66■■■□□ 2.02
CTDSPL-206ENST00000443503 GSE1Q14687 1217 aa27.64■■■□□ 2.02
CTDSPL-206ENST00000443503 DDX11L8A8MPP1 907 aa27.64■■■□□ 2.02
CTDSPL-206ENST00000443503 UNC13AQ9UPW8 1703 aa27.64■■■□□ 2.01
CTDSPL-206ENST00000443503 SMG6Q86US8 1419 aaKnown RBP27.64■■■□□ 2.01
CTDSPL-206ENST00000443503 REC8O95072 547 aa27.63■■■□□ 2.01
CTDSPL-206ENST00000443503 CHAF1AQ13111 956 aaPredicted RBP27.63■■■□□ 2.01
CTDSPL-206ENST00000443503 CDK19Q9BWU1 502 aa27.63■■■□□ 2.01
CTDSPL-206ENST00000443503 HTATSF1O43719 755 aaKnown RBP27.63■■■□□ 2.01
CTDSPL-206ENST00000443503 NEXNQ0ZGT2 675 aa27.63■■■□□ 2.01
CTDSPL-206ENST00000443503 PDE3AQ14432 1141 aa27.63■■■□□ 2.01
CTDSPL-206ENST00000443503 DDX49Q9Y6V7 483 aaKnown RBP27.62■■■□□ 2.01
CTDSPL-206ENST00000443503 FOXD4L6Q3SYB3 417 aaPredicted RBP27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms