RNA–Protein interactions for RNA: ENST00000442869.5

RCL1-206, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 3 BASIC

Gene RCL1, Length 1,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-206ENST00000442869 SLC26A8Q96RN1 970 aa19.11■□□□□ 0.65
RCL1-206ENST00000442869 E9PCH4 1651 aa19.11■□□□□ 0.65
RCL1-206ENST00000442869 NUP155O75694 1391 aa19.11■□□□□ 0.65
RCL1-206ENST00000442869 ILDR2Q71H61 639 aa19.1■□□□□ 0.65
RCL1-206ENST00000442869 IQGAP3Q86VI3 1631 aa19.09■□□□□ 0.65
RCL1-206ENST00000442869 XIRP1Q702N8 1843 aaKnown RBP19.08■□□□□ 0.65
RCL1-206ENST00000442869 BCANQ96GW7 911 aa19.07■□□□□ 0.64
RCL1-206ENST00000442869 TMEM131LA2VDJ0 1609 aa19.07■□□□□ 0.64
RCL1-206ENST00000442869 CHGAP10645 457 aaKnown RBP19.07■□□□□ 0.64
RCL1-206ENST00000442869 RRBP1Q9P2E9 1410 aaKnown RBP19.05■□□□□ 0.64
RCL1-206ENST00000442869 KCNA6P17658 529 aa19.05■□□□□ 0.64
RCL1-206ENST00000442869 ZFYVE9O95405 1425 aa19.05■□□□□ 0.64
RCL1-206ENST00000442869 HDGFP51858 240 aaKnown RBP19.03■□□□□ 0.64
RCL1-206ENST00000442869 RIMS2Q9UQ26 1411 aa19.03■□□□□ 0.64
RCL1-206ENST00000442869 PPP1R15AO75807 674 aaPredicted RBP19.02■□□□□ 0.64
RCL1-206ENST00000442869 RBM33Q96EV2 1170 aaKnown RBP19.02■□□□□ 0.64
RCL1-206ENST00000442869 NUTM2DQ5VT03 806 aaPredicted RBP19.01■□□□□ 0.63
RCL1-206ENST00000442869 PROSER2Q86WR7 435 aaPredicted RBP19.01■□□□□ 0.63
RCL1-206ENST00000442869 TMEM94Q12767 1356 aa19■□□□□ 0.63
RCL1-206ENST00000442869 PLEKHG1Q9ULL1 1385 aa19■□□□□ 0.63
RCL1-206ENST00000442869 MSH5O43196 834 aa18.99■□□□□ 0.63
RCL1-206ENST00000442869 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.99■□□□□ 0.63
RCL1-206ENST00000442869 CHD2O14647 1828 aaKnown RBP18.98■□□□□ 0.63
RCL1-206ENST00000442869 NAIPQ13075 1403 aa18.98■□□□□ 0.63
RCL1-206ENST00000442869 TBX22Q9Y458 520 aa18.96■□□□□ 0.63
RCL1-206ENST00000442869 SPHKAPQ2M3C7 1700 aa18.95■□□□□ 0.62
RCL1-206ENST00000442869 NWD1Q149M9 1564 aa18.95■□□□□ 0.62
RCL1-206ENST00000442869 NKTRP30414 1462 aaKnown RBP18.93■□□□□ 0.62
RCL1-206ENST00000442869 ADAMTS13Q76LX8 1427 aa18.92■□□□□ 0.62
RCL1-206ENST00000442869 MED1Q15648 1581 aaPredicted RBP18.92■□□□□ 0.62
RCL1-206ENST00000442869 SOCS7O14512 581 aa18.91■□□□□ 0.62
RCL1-206ENST00000442869 TRIM52Q96A61 297 aa18.9■□□□□ 0.62
RCL1-206ENST00000442869 FAM135BQ49AJ0 1406 aa18.9■□□□□ 0.62
RCL1-206ENST00000442869 ZNF326Q5BKZ1 582 aaKnown RBP18.89■□□□□ 0.62
RCL1-206ENST00000442869 HFM1A2PYH4 1435 aa18.88■□□□□ 0.61
RCL1-206ENST00000442869 MSH6P52701 1360 aa18.88■□□□□ 0.61
RCL1-206ENST00000442869 SLAIN2Q9P270 581 aa18.86■□□□□ 0.61
RCL1-206ENST00000442869 ROBO1Q9Y6N7 1651 aa18.86■□□□□ 0.61
RCL1-206ENST00000442869 CLTCL1P53675 1640 aa18.86■□□□□ 0.61
RCL1-206ENST00000442869 DIP2AQ14689 1571 aa18.85■□□□□ 0.61
RCL1-206ENST00000442869 PIK3R4Q99570 1358 aa18.85■□□□□ 0.61
RCL1-206ENST00000442869 AMOTL2Q9Y2J4 779 aa18.85■□□□□ 0.61
RCL1-206ENST00000442869 NCBP3Q53F19 620 aaKnown RBP18.84■□□□□ 0.61
RCL1-206ENST00000442869 SLC4A1APQ9BWU0 796 aaKnown RBP18.84■□□□□ 0.61
RCL1-206ENST00000442869 KIF1BO60333 1816 aa18.83■□□□□ 0.61
RCL1-206ENST00000442869 TRPM2O94759 1503 aa18.83■□□□□ 0.61
RCL1-206ENST00000442869 PTPRUQ92729 1446 aa18.83■□□□□ 0.6
RCL1-206ENST00000442869 NRXN3Q9Y4C0 1643 aa18.83■□□□□ 0.6
RCL1-206ENST00000442869 C14orf37Q86TY3 774 aa18.82■□□□□ 0.6
RCL1-206ENST00000442869 NCOA3Q9Y6Q9 1424 aa18.81■□□□□ 0.6
RCL1-206ENST00000442869 C19orf44Q9H6X5 657 aa18.8■□□□□ 0.6
RCL1-206ENST00000442869 SETBP1Q9Y6X0 1596 aa18.79■□□□□ 0.6
RCL1-206ENST00000442869 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.79■□□□□ 0.6
RCL1-206ENST00000442869 NEXMIFQ5QGS0 1516 aa18.79■□□□□ 0.6
RCL1-206ENST00000442869 METP08581 1390 aa18.78■□□□□ 0.6
RCL1-206ENST00000442869 ATF3P18847 181 aa18.76■□□□□ 0.59
RCL1-206ENST00000442869 CADPS2Q86UW7 1296 aa18.76■□□□□ 0.59
RCL1-206ENST00000442869 PHLPP1O60346 1717 aa18.74■□□□□ 0.59
RCL1-206ENST00000442869 XRN1Q8IZH2 1706 aaKnown RBP18.74■□□□□ 0.59
RCL1-206ENST00000442869 VGFO15240 615 aaPredicted RBP18.74■□□□□ 0.59
RCL1-206ENST00000442869 RGS17Q9UGC6 210 aaPredicted RBP18.74■□□□□ 0.59
RCL1-206ENST00000442869 MPHOSPH9Q99550 1183 aa18.72■□□□□ 0.59
RCL1-206ENST00000442869 RPGRIP1LQ68CZ1 1315 aa18.71■□□□□ 0.59
RCL1-206ENST00000442869 PPLO60437 1756 aa18.68■□□□□ 0.58
RCL1-206ENST00000442869 COL16A1Q07092 1604 aaPredicted RBP18.67■□□□□ 0.58
RCL1-206ENST00000442869 JCADQ9P266 1359 aa18.67■□□□□ 0.58
RCL1-206ENST00000442869 SETD1AO15047 1707 aaKnown RBP18.67■□□□□ 0.58
RCL1-206ENST00000442869 RGL3Q3MIN7 710 aa18.67■□□□□ 0.58
RCL1-206ENST00000442869 BRINP3Q76B58 766 aa18.67■□□□□ 0.58
RCL1-206ENST00000442869 DCCP43146 1447 aa18.66■□□□□ 0.58
RCL1-206ENST00000442869 CCDC144AA2RUR9 1427 aa18.65■□□□□ 0.58
RCL1-206ENST00000442869 SETD5Q9C0A6 1442 aa18.64■□□□□ 0.57
RCL1-206ENST00000442869 AHDC1Q5TGY3 1603 aaPredicted RBP18.63■□□□□ 0.57
RCL1-206ENST00000442869 NALCNQ8IZF0 1738 aa18.63■□□□□ 0.57
RCL1-206ENST00000442869 MST1RQ04912 1400 aa18.62■□□□□ 0.57
RCL1-206ENST00000442869 ADGRL3Q9HAR2 1447 aa18.62■□□□□ 0.57
RCL1-206ENST00000442869 POTEAQ6S8J7 498 aa18.62■□□□□ 0.57
RCL1-206ENST00000442869 ADGRF5Q8IZF2 1346 aa18.62■□□□□ 0.57
RCL1-206ENST00000442869 ROBO2Q9HCK4 1378 aa18.62■□□□□ 0.57
RCL1-206ENST00000442869 SPATA31E1Q6ZUB1 1445 aa18.61■□□□□ 0.57
RCL1-206ENST00000442869 ASXL1Q8IXJ9 1541 aa18.59■□□□□ 0.57
RCL1-206ENST00000442869 PTCH1Q13635 1447 aa18.59■□□□□ 0.57
RCL1-206ENST00000442869 ACIN1Q9UKV3 1341 aaKnown RBP18.59■□□□□ 0.57
RCL1-206ENST00000442869 SPATA31A6Q5VVP1 1343 aa18.58■□□□□ 0.57
RCL1-206ENST00000442869 NPM3O75607 178 aaKnown RBP18.58■□□□□ 0.56
RCL1-206ENST00000442869 DDX17Q92841 729 aaKnown RBP18.58■□□□□ 0.56
RCL1-206ENST00000442869 IFT172Q9UG01 1749 aa18.58■□□□□ 0.56
RCL1-206ENST00000442869 SHPRHQ149N8 1683 aa18.57■□□□□ 0.56
RCL1-206ENST00000442869 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
RCL1-206ENST00000442869 LRP6O75581 1613 aa18.56■□□□□ 0.56
RCL1-206ENST00000442869 ANKRD30BQ9BXX2 1392 aa18.56■□□□□ 0.56
RCL1-206ENST00000442869 CNKSR2Q8WXI2 1034 aa18.56■□□□□ 0.56
RCL1-206ENST00000442869 NHSL1Q5SYE7 1610 aa18.55■□□□□ 0.56
RCL1-206ENST00000442869 PRAG1Q86YV5 1406 aa18.55■□□□□ 0.56
RCL1-206ENST00000442869 C1orf167Q5SNV9 1468 aa18.54■□□□□ 0.56
RCL1-206ENST00000442869 TMEM132EQ6IEE7 984 aa18.54■□□□□ 0.56
RCL1-206ENST00000442869 ORAI2Q96SN7 254 aa18.54■□□□□ 0.56
RCL1-206ENST00000442869 STK26Q9P289 416 aa18.54■□□□□ 0.56
RCL1-206ENST00000442869 MEX3CQ5U5Q3 659 aaKnown RBP18.53■□□□□ 0.56
RCL1-206ENST00000442869 LRRC59Q96AG4 307 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms