RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 SLC26A8Q96RN1 970 aa25.16■■□□□ 1.62
IRF3-204ENST00000442265 HSPA1LP34931 641 aa25.14■■□□□ 1.62
IRF3-204ENST00000442265 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.14■■□□□ 1.62
IRF3-204ENST00000442265 DISP3Q9P2K9 1392 aa25.14■■□□□ 1.61
IRF3-204ENST00000442265 SCAF1Q9H7N4 1312 aaKnown RBP25.12■■□□□ 1.61
IRF3-204ENST00000442265 HFM1A2PYH4 1435 aa25.12■■□□□ 1.61
IRF3-204ENST00000442265 MYO5BQ9ULV0 1848 aa25.11■■□□□ 1.61
IRF3-204ENST00000442265 NWD1Q149M9 1564 aa25.1■■□□□ 1.61
IRF3-204ENST00000442265 NKTRP30414 1462 aaKnown RBP25.09■■□□□ 1.61
IRF3-204ENST00000442265 TBX22Q9Y458 520 aa25.09■■□□□ 1.61
IRF3-204ENST00000442265 XIRP1Q702N8 1843 aaKnown RBP25.09■■□□□ 1.61
IRF3-204ENST00000442265 TMEM94Q12767 1356 aa25.08■■□□□ 1.61
IRF3-204ENST00000442265 PPP1R15AO75807 674 aaPredicted RBP25.08■■□□□ 1.61
IRF3-204ENST00000442265 CHGAP10645 457 aaKnown RBP25.08■■□□□ 1.61
IRF3-204ENST00000442265 BCANQ96GW7 911 aa25.05■■□□□ 1.6
IRF3-204ENST00000442265 ADAMTS13Q76LX8 1427 aa25.04■■□□□ 1.6
IRF3-204ENST00000442265 PROSER2Q86WR7 435 aaPredicted RBP25.04■■□□□ 1.6
IRF3-204ENST00000442265 SPHKAPQ2M3C7 1700 aa25.03■■□□□ 1.6
IRF3-204ENST00000442265 PIK3R4Q99570 1358 aa25.02■■□□□ 1.6
IRF3-204ENST00000442265 DIP2AQ14689 1571 aa25.01■■□□□ 1.59
IRF3-204ENST00000442265 FAM135BQ49AJ0 1406 aa25■■□□□ 1.59
IRF3-204ENST00000442265 TRPM2O94759 1503 aa25■■□□□ 1.59
IRF3-204ENST00000442265 CHD2O14647 1828 aaKnown RBP25■■□□□ 1.59
IRF3-204ENST00000442265 ILDR2Q71H61 639 aa24.99■■□□□ 1.59
IRF3-204ENST00000442265 NCOA3Q9Y6Q9 1424 aa24.98■■□□□ 1.59
IRF3-204ENST00000442265 NUTM2DQ5VT03 806 aaPredicted RBP24.97■■□□□ 1.59
IRF3-204ENST00000442265 SENP3Q9H4L4 574 aaPredicted RBP24.95■■□□□ 1.58
IRF3-204ENST00000442265 CLTCL1P53675 1640 aa24.94■■□□□ 1.58
IRF3-204ENST00000442265 RBM33Q96EV2 1170 aaKnown RBP24.94■■□□□ 1.58
IRF3-204ENST00000442265 TRIM52Q96A61 297 aa24.93■■□□□ 1.58
IRF3-204ENST00000442265 SETBP1Q9Y6X0 1596 aa24.93■■□□□ 1.58
IRF3-204ENST00000442265 MSH6P52701 1360 aa24.93■■□□□ 1.58
IRF3-204ENST00000442265 SLC4A1APQ9BWU0 796 aaKnown RBP24.91■■□□□ 1.58
IRF3-204ENST00000442265 MED1Q15648 1581 aaPredicted RBP24.9■■□□□ 1.58
IRF3-204ENST00000442265 ZNF326Q5BKZ1 582 aaKnown RBP24.89■■□□□ 1.58
IRF3-204ENST00000442265 NRXN3Q9Y4C0 1643 aa24.89■■□□□ 1.57
IRF3-204ENST00000442265 PTPRUQ92729 1446 aa24.88■■□□□ 1.57
IRF3-204ENST00000442265 NEXMIFQ5QGS0 1516 aa24.88■■□□□ 1.57
IRF3-204ENST00000442265 SLAIN2Q9P270 581 aa24.87■■□□□ 1.57
IRF3-204ENST00000442265 AMOTL2Q9Y2J4 779 aa24.86■■□□□ 1.57
IRF3-204ENST00000442265 ACIN1Q9UKV3 1341 aaKnown RBP24.84■■□□□ 1.57
IRF3-204ENST00000442265 ROBO1Q9Y6N7 1651 aa24.83■■□□□ 1.57
IRF3-204ENST00000442265 SOCS7O14512 581 aa24.83■■□□□ 1.57
IRF3-204ENST00000442265 C19orf44Q9H6X5 657 aa24.83■■□□□ 1.57
IRF3-204ENST00000442265 RPGRIP1LQ68CZ1 1315 aa24.83■■□□□ 1.56
IRF3-204ENST00000442265 KIF1BO60333 1816 aa24.82■■□□□ 1.56
IRF3-204ENST00000442265 METP08581 1390 aa24.81■■□□□ 1.56
IRF3-204ENST00000442265 XRN1Q8IZH2 1706 aaKnown RBP24.81■■□□□ 1.56
IRF3-204ENST00000442265 VGFO15240 615 aaPredicted RBP24.8■■□□□ 1.56
IRF3-204ENST00000442265 CADPS2Q86UW7 1296 aa24.79■■□□□ 1.56
IRF3-204ENST00000442265 MPHOSPH9Q99550 1183 aa24.77■■□□□ 1.56
IRF3-204ENST00000442265 DCCP43146 1447 aa24.77■■□□□ 1.56
IRF3-204ENST00000442265 C14orf37Q86TY3 774 aa24.76■■□□□ 1.55
IRF3-204ENST00000442265 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.75■■□□□ 1.55
IRF3-204ENST00000442265 FOXD1Q16676 465 aa24.75■■□□□ 1.55
IRF3-204ENST00000442265 ATF3P18847 181 aa24.74■■□□□ 1.55
IRF3-204ENST00000442265 SETD5Q9C0A6 1442 aa24.73■■□□□ 1.55
IRF3-204ENST00000442265 CCDC144AA2RUR9 1427 aa24.71■■□□□ 1.55
IRF3-204ENST00000442265 PRAG1Q86YV5 1406 aa24.71■■□□□ 1.55
IRF3-204ENST00000442265 SPATA31E1Q6ZUB1 1445 aa24.7■■□□□ 1.55
IRF3-204ENST00000442265 PHF23Q9BUL5 403 aaPredicted RBP24.69■■□□□ 1.54
IRF3-204ENST00000442265 SETD1AO15047 1707 aaKnown RBP24.68■■□□□ 1.54
IRF3-204ENST00000442265 PTCH1Q13635 1447 aa24.68■■□□□ 1.54
IRF3-204ENST00000442265 PPLO60437 1756 aa24.67■■□□□ 1.54
IRF3-204ENST00000442265 ADGRL3Q9HAR2 1447 aa24.67■■□□□ 1.54
IRF3-204ENST00000442265 JCADQ9P266 1359 aa24.66■■□□□ 1.54
IRF3-204ENST00000442265 AHDC1Q5TGY3 1603 aaPredicted RBP24.65■■□□□ 1.54
IRF3-204ENST00000442265 PHLPP1O60346 1717 aa24.65■■□□□ 1.54
IRF3-204ENST00000442265 COL16A1Q07092 1604 aaPredicted RBP24.64■■□□□ 1.54
IRF3-204ENST00000442265 MST1RQ04912 1400 aa24.64■■□□□ 1.54
IRF3-204ENST00000442265 BRINP3Q76B58 766 aa24.64■■□□□ 1.54
IRF3-204ENST00000442265 RGS17Q9UGC6 210 aaPredicted RBP24.64■■□□□ 1.54
IRF3-204ENST00000442265 ANKRD30BQ9BXX2 1392 aa24.64■■□□□ 1.53
IRF3-204ENST00000442265 RAB3GAP2Q9H2M9 1393 aa24.62■■□□□ 1.53
IRF3-204ENST00000442265 ROBO2Q9HCK4 1378 aa24.61■■□□□ 1.53
IRF3-204ENST00000442265 ADGRF5Q8IZF2 1346 aa24.61■■□□□ 1.53
IRF3-204ENST00000442265 RGL3Q3MIN7 710 aa24.59■■□□□ 1.53
IRF3-204ENST00000442265 HRCP23327 699 aa24.58■■□□□ 1.53
IRF3-204ENST00000442265 ASXL1Q8IXJ9 1541 aa24.57■■□□□ 1.52
IRF3-204ENST00000442265 NALCNQ8IZF0 1738 aa24.57■■□□□ 1.52
IRF3-204ENST00000442265 IFT172Q9UG01 1749 aa24.56■■□□□ 1.52
IRF3-204ENST00000442265 SPATA31A6Q5VVP1 1343 aa24.56■■□□□ 1.52
IRF3-204ENST00000442265 PIK3C2GO75747 1445 aa24.54■■□□□ 1.52
IRF3-204ENST00000442265 TECPR2O15040 1411 aa24.53■■□□□ 1.52
IRF3-204ENST00000442265 C1orf167Q5SNV9 1468 aa24.51■■□□□ 1.51
IRF3-204ENST00000442265 LRPPRCP42704 1394 aaKnown RBP24.51■■□□□ 1.51
IRF3-204ENST00000442265 NRXN1Q9ULB1 1477 aa24.51■■□□□ 1.51
IRF3-204ENST00000442265 NHSL1Q5SYE7 1610 aa24.5■■□□□ 1.51
IRF3-204ENST00000442265 SHPRHQ149N8 1683 aa24.5■■□□□ 1.51
IRF3-204ENST00000442265 ABCC11Q96J66 1382 aa24.5■■□□□ 1.51
IRF3-204ENST00000442265 LRP6O75581 1613 aa24.47■■□□□ 1.51
IRF3-204ENST00000442265 MYOM2P54296 1465 aa24.47■■□□□ 1.51
IRF3-204ENST00000442265 POTEAQ6S8J7 498 aa24.46■■□□□ 1.51
IRF3-204ENST00000442265 LRRC59Q96AG4 307 aaKnown RBP24.46■■□□□ 1.51
IRF3-204ENST00000442265 C14orf93Q9H972 538 aaKnown RBP24.46■■□□□ 1.51
IRF3-204ENST00000442265 LAMC1P11047 1609 aa24.46■■□□□ 1.51
IRF3-204ENST00000442265 SIRT1Q96EB6 747 aa24.44■■□□□ 1.5
IRF3-204ENST00000442265 CDC42BPGQ6DT37 1551 aa24.44■■□□□ 1.5
IRF3-204ENST00000442265 TMEM132EQ6IEE7 984 aa24.43■■□□□ 1.5
IRF3-204ENST00000442265 YTHDC2Q9H6S0 1430 aaKnown RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms