RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 PPP1R15AO75807 674 aaPredicted RBP17.78■□□□□ 0.44
UBE2D4-204ENST00000440899 PPARGC1BQ86YN6 1023 aaKnown RBP17.78■□□□□ 0.44
UBE2D4-204ENST00000440899 ZFYVE9O95405 1425 aa17.78■□□□□ 0.44
UBE2D4-204ENST00000440899 PLEKHG1Q9ULL1 1385 aa17.78■□□□□ 0.44
UBE2D4-204ENST00000440899 CHGAP10645 457 aaKnown RBP17.77■□□□□ 0.44
UBE2D4-204ENST00000440899 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.77■□□□□ 0.44
UBE2D4-204ENST00000440899 RIMS2Q9UQ26 1411 aa17.77■□□□□ 0.44
UBE2D4-204ENST00000440899 NUP155O75694 1391 aa17.77■□□□□ 0.43
UBE2D4-204ENST00000440899 FAM135BQ49AJ0 1406 aa17.76■□□□□ 0.43
UBE2D4-204ENST00000440899 XIRP1Q702N8 1843 aaKnown RBP17.76■□□□□ 0.43
UBE2D4-204ENST00000440899 GCC2Q8IWJ2 1684 aa17.76■□□□□ 0.43
UBE2D4-204ENST00000440899 PHF23Q9BUL5 403 aaPredicted RBP17.75■□□□□ 0.43
UBE2D4-204ENST00000440899 TBX22Q9Y458 520 aa17.75■□□□□ 0.43
UBE2D4-204ENST00000440899 NKTRP30414 1462 aaKnown RBP17.75■□□□□ 0.43
UBE2D4-204ENST00000440899 TMEM131LA2VDJ0 1609 aa17.74■□□□□ 0.43
UBE2D4-204ENST00000440899 RBM33Q96EV2 1170 aaKnown RBP17.74■□□□□ 0.43
UBE2D4-204ENST00000440899 IQGAP3Q86VI3 1631 aa17.72■□□□□ 0.43
UBE2D4-204ENST00000440899 E9PCH4 1651 aa17.72■□□□□ 0.43
UBE2D4-204ENST00000440899 NWD1Q149M9 1564 aa17.71■□□□□ 0.43
UBE2D4-204ENST00000440899 MSH6P52701 1360 aa17.7■□□□□ 0.42
UBE2D4-204ENST00000440899 MYO5BQ9ULV0 1848 aa17.7■□□□□ 0.42
UBE2D4-204ENST00000440899 NUTM2DQ5VT03 806 aaPredicted RBP17.68■□□□□ 0.42
UBE2D4-204ENST00000440899 SLAIN2Q9P270 581 aa17.68■□□□□ 0.42
UBE2D4-204ENST00000440899 NCOA3Q9Y6Q9 1424 aa17.66■□□□□ 0.42
UBE2D4-204ENST00000440899 PIK3R4Q99570 1358 aa17.66■□□□□ 0.42
UBE2D4-204ENST00000440899 CHD2O14647 1828 aaKnown RBP17.65■□□□□ 0.42
UBE2D4-204ENST00000440899 ADAMTS13Q76LX8 1427 aa17.65■□□□□ 0.42
UBE2D4-204ENST00000440899 RRBP1Q9P2E9 1410 aaKnown RBP17.64■□□□□ 0.41
UBE2D4-204ENST00000440899 C14orf37Q86TY3 774 aa17.63■□□□□ 0.41
UBE2D4-204ENST00000440899 ROBO1Q9Y6N7 1651 aa17.63■□□□□ 0.41
UBE2D4-204ENST00000440899 DIP2AQ14689 1571 aa17.62■□□□□ 0.41
UBE2D4-204ENST00000440899 ZNF326Q5BKZ1 582 aaKnown RBP17.61■□□□□ 0.41
UBE2D4-204ENST00000440899 C19orf44Q9H6X5 657 aa17.61■□□□□ 0.41
UBE2D4-204ENST00000440899 AMOTL2Q9Y2J4 779 aa17.61■□□□□ 0.41
UBE2D4-204ENST00000440899 RGS17Q9UGC6 210 aaPredicted RBP17.6■□□□□ 0.41
UBE2D4-204ENST00000440899 NAIPQ13075 1403 aa17.59■□□□□ 0.41
UBE2D4-204ENST00000440899 CADPS2Q86UW7 1296 aa17.59■□□□□ 0.41
UBE2D4-204ENST00000440899 TRPM2O94759 1503 aa17.58■□□□□ 0.41
UBE2D4-204ENST00000440899 ATF3P18847 181 aa17.58■□□□□ 0.4
UBE2D4-204ENST00000440899 SPHKAPQ2M3C7 1700 aa17.57■□□□□ 0.4
UBE2D4-204ENST00000440899 PTPRUQ92729 1446 aa17.55■□□□□ 0.4
UBE2D4-204ENST00000440899 JCADQ9P266 1359 aa17.55■□□□□ 0.4
UBE2D4-204ENST00000440899 TRIM52Q96A61 297 aa17.54■□□□□ 0.4
UBE2D4-204ENST00000440899 SETBP1Q9Y6X0 1596 aa17.53■□□□□ 0.4
UBE2D4-204ENST00000440899 PHLPP1O60346 1717 aa17.52■□□□□ 0.4
UBE2D4-204ENST00000440899 HFM1A2PYH4 1435 aa17.52■□□□□ 0.4
UBE2D4-204ENST00000440899 POTEAQ6S8J7 498 aa17.51■□□□□ 0.39
UBE2D4-204ENST00000440899 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.51■□□□□ 0.39
UBE2D4-204ENST00000440899 METP08581 1390 aa17.51■□□□□ 0.39
UBE2D4-204ENST00000440899 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
UBE2D4-204ENST00000440899 CLTCL1P53675 1640 aa17.5■□□□□ 0.39
UBE2D4-204ENST00000440899 NRXN3Q9Y4C0 1643 aa17.5■□□□□ 0.39
UBE2D4-204ENST00000440899 DCCP43146 1447 aa17.49■□□□□ 0.39
UBE2D4-204ENST00000440899 VGFO15240 615 aaPredicted RBP17.49■□□□□ 0.39
UBE2D4-204ENST00000440899 BRINP3Q76B58 766 aa17.48■□□□□ 0.39
UBE2D4-204ENST00000440899 SPATA31A6Q5VVP1 1343 aa17.47■□□□□ 0.39
UBE2D4-204ENST00000440899 NEXMIFQ5QGS0 1516 aa17.47■□□□□ 0.39
UBE2D4-204ENST00000440899 COL16A1Q07092 1604 aaPredicted RBP17.47■□□□□ 0.39
UBE2D4-204ENST00000440899 XRN1Q8IZH2 1706 aaKnown RBP17.47■□□□□ 0.39
UBE2D4-204ENST00000440899 RPGRIP1LQ68CZ1 1315 aa17.47■□□□□ 0.39
UBE2D4-204ENST00000440899 AHDC1Q5TGY3 1603 aaPredicted RBP17.46■□□□□ 0.39
UBE2D4-204ENST00000440899 KIF1BO60333 1816 aa17.44■□□□□ 0.38
UBE2D4-204ENST00000440899 MST1RQ04912 1400 aa17.42■□□□□ 0.38
UBE2D4-204ENST00000440899 ADGRL3Q9HAR2 1447 aa17.42■□□□□ 0.38
UBE2D4-204ENST00000440899 MEX3CQ5U5Q3 659 aaKnown RBP17.42■□□□□ 0.38
UBE2D4-204ENST00000440899 ASXL1Q8IXJ9 1541 aa17.39■□□□□ 0.37
UBE2D4-204ENST00000440899 LRRC59Q96AG4 307 aaKnown RBP17.39■□□□□ 0.37
UBE2D4-204ENST00000440899 LRP6O75581 1613 aa17.39■□□□□ 0.37
UBE2D4-204ENST00000440899 FOXD1Q16676 465 aa17.38■□□□□ 0.37
UBE2D4-204ENST00000440899 ZNF772Q68DY9 489 aaPredicted RBP17.38■□□□□ 0.37
UBE2D4-204ENST00000440899 PTCH1Q13635 1447 aa17.38■□□□□ 0.37
UBE2D4-204ENST00000440899 SETD5Q9C0A6 1442 aa17.38■□□□□ 0.37
UBE2D4-204ENST00000440899 SHPRHQ149N8 1683 aa17.37■□□□□ 0.37
UBE2D4-204ENST00000440899 ROBO2Q9HCK4 1378 aa17.37■□□□□ 0.37
UBE2D4-204ENST00000440899 NUTM2BA6NNL0 878 aaPredicted RBP17.36■□□□□ 0.37
UBE2D4-204ENST00000440899 NUTM2EB1AL46 878 aaPredicted RBP17.36■□□□□ 0.37
UBE2D4-204ENST00000440899 NUTM2AQ8IVF1 878 aaPredicted RBP17.36■□□□□ 0.37
UBE2D4-204ENST00000440899 MPHOSPH9Q99550 1183 aa17.36■□□□□ 0.37
UBE2D4-204ENST00000440899 CCDC144AA2RUR9 1427 aa17.35■□□□□ 0.37
UBE2D4-204ENST00000440899 PRAG1Q86YV5 1406 aa17.35■□□□□ 0.37
UBE2D4-204ENST00000440899 C1orf167Q5SNV9 1468 aa17.34■□□□□ 0.37
UBE2D4-204ENST00000440899 DDX17Q92841 729 aaKnown RBP17.34■□□□□ 0.37
UBE2D4-204ENST00000440899 ACIN1Q9UKV3 1341 aaKnown RBP17.34■□□□□ 0.37
UBE2D4-204ENST00000440899 NALCNQ8IZF0 1738 aa17.33■□□□□ 0.37
UBE2D4-204ENST00000440899 RGL3Q3MIN7 710 aa17.33■□□□□ 0.36
UBE2D4-204ENST00000440899 SETD1AO15047 1707 aaKnown RBP17.33■□□□□ 0.36
UBE2D4-204ENST00000440899 NHSL1Q5SYE7 1610 aa17.32■□□□□ 0.36
UBE2D4-204ENST00000440899 ADGRF5Q8IZF2 1346 aa17.32■□□□□ 0.36
UBE2D4-204ENST00000440899 ANKRD30BQ9BXX2 1392 aa17.31■□□□□ 0.36
UBE2D4-204ENST00000440899 PPLO60437 1756 aa17.31■□□□□ 0.36
UBE2D4-204ENST00000440899 ORAI2Q96SN7 254 aa17.3■□□□□ 0.36
UBE2D4-204ENST00000440899 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
UBE2D4-204ENST00000440899 PNPLA6Q8IY17 1366 aa17.29■□□□□ 0.36
UBE2D4-204ENST00000440899 RXRBP28702 533 aa17.29■□□□□ 0.36
UBE2D4-204ENST00000440899 AFF2P51816 1311 aa17.28■□□□□ 0.36
UBE2D4-204ENST00000440899 SOS2Q07890 1332 aaPredicted RBP17.27■□□□□ 0.36
UBE2D4-204ENST00000440899 STK26Q9P289 416 aa17.27■□□□□ 0.36
UBE2D4-204ENST00000440899 C8orf37Q96NL8 207 aa17.25■□□□□ 0.35
UBE2D4-204ENST00000440899 LRPPRCP42704 1394 aaKnown RBP17.25■□□□□ 0.35
UBE2D4-204ENST00000440899 ABCC11Q96J66 1382 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms