RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 SCAF1Q9H7N4 1312 aaKnown RBP25.67■■□□□ 1.7
COL16A1-204ENST00000440437 RIMS2Q9UQ26 1411 aa25.65■■□□□ 1.7
COL16A1-204ENST00000440437 HSPA1LP34931 641 aa25.63■■□□□ 1.69
COL16A1-204ENST00000440437 PLEKHG1Q9ULL1 1385 aa25.63■■□□□ 1.69
COL16A1-204ENST00000440437 CHD2O14647 1828 aaKnown RBP25.63■■□□□ 1.69
COL16A1-204ENST00000440437 SLC26A8Q96RN1 970 aa25.62■■□□□ 1.69
COL16A1-204ENST00000440437 NAIPQ13075 1403 aa25.62■■□□□ 1.69
COL16A1-204ENST00000440437 NKTRP30414 1462 aaKnown RBP25.61■■□□□ 1.69
COL16A1-204ENST00000440437 KCNA6P17658 529 aa25.59■■□□□ 1.69
COL16A1-204ENST00000440437 TMEM94Q12767 1356 aa25.56■■□□□ 1.68
COL16A1-204ENST00000440437 DIP2AQ14689 1571 aa25.56■■□□□ 1.68
COL16A1-204ENST00000440437 ILDR2Q71H61 639 aa25.56■■□□□ 1.68
COL16A1-204ENST00000440437 MED1Q15648 1581 aaPredicted RBP25.56■■□□□ 1.68
COL16A1-204ENST00000440437 CHGAP10645 457 aaKnown RBP25.54■■□□□ 1.68
COL16A1-204ENST00000440437 HDGFP51858 240 aaKnown RBP25.54■■□□□ 1.68
COL16A1-204ENST00000440437 HFM1A2PYH4 1435 aa25.54■■□□□ 1.68
COL16A1-204ENST00000440437 CLTCL1P53675 1640 aa25.53■■□□□ 1.68
COL16A1-204ENST00000440437 PPP1R15AO75807 674 aaPredicted RBP25.53■■□□□ 1.68
COL16A1-204ENST00000440437 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.53■■□□□ 1.68
COL16A1-204ENST00000440437 ADAMTS13Q76LX8 1427 aa25.53■■□□□ 1.68
COL16A1-204ENST00000440437 TRPM2O94759 1503 aa25.52■■□□□ 1.68
COL16A1-204ENST00000440437 BCANQ96GW7 911 aa25.51■■□□□ 1.67
COL16A1-204ENST00000440437 SENP3Q9H4L4 574 aaPredicted RBP25.5■■□□□ 1.67
COL16A1-204ENST00000440437 NRXN3Q9Y4C0 1643 aa25.49■■□□□ 1.67
COL16A1-204ENST00000440437 PROSER2Q86WR7 435 aaPredicted RBP25.48■■□□□ 1.67
COL16A1-204ENST00000440437 TBX22Q9Y458 520 aa25.48■■□□□ 1.67
COL16A1-204ENST00000440437 KIF1BO60333 1816 aa25.47■■□□□ 1.67
COL16A1-204ENST00000440437 ROBO1Q9Y6N7 1651 aa25.46■■□□□ 1.67
COL16A1-204ENST00000440437 NUTM2DQ5VT03 806 aaPredicted RBP25.46■■□□□ 1.67
COL16A1-204ENST00000440437 FAM135BQ49AJ0 1406 aa25.46■■□□□ 1.67
COL16A1-204ENST00000440437 SETBP1Q9Y6X0 1596 aa25.45■■□□□ 1.66
COL16A1-204ENST00000440437 RBM33Q96EV2 1170 aaKnown RBP25.45■■□□□ 1.66
COL16A1-204ENST00000440437 PIK3R4Q99570 1358 aa25.44■■□□□ 1.66
COL16A1-204ENST00000440437 NEXMIFQ5QGS0 1516 aa25.43■■□□□ 1.66
COL16A1-204ENST00000440437 MSH6P52701 1360 aa25.41■■□□□ 1.66
COL16A1-204ENST00000440437 XRN1Q8IZH2 1706 aaKnown RBP25.4■■□□□ 1.66
COL16A1-204ENST00000440437 NCOA3Q9Y6Q9 1424 aa25.4■■□□□ 1.66
COL16A1-204ENST00000440437 PTPRUQ92729 1446 aa25.38■■□□□ 1.65
COL16A1-204ENST00000440437 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.37■■□□□ 1.65
COL16A1-204ENST00000440437 SOCS7O14512 581 aa25.34■■□□□ 1.65
COL16A1-204ENST00000440437 TRIM52Q96A61 297 aa25.34■■□□□ 1.65
COL16A1-204ENST00000440437 ZNF326Q5BKZ1 582 aaKnown RBP25.33■■□□□ 1.65
COL16A1-204ENST00000440437 SETD1AO15047 1707 aaKnown RBP25.32■■□□□ 1.64
COL16A1-204ENST00000440437 PHLPP1O60346 1717 aa25.32■■□□□ 1.64
COL16A1-204ENST00000440437 PPLO60437 1756 aa25.31■■□□□ 1.64
COL16A1-204ENST00000440437 SLC4A1APQ9BWU0 796 aaKnown RBP25.3■■□□□ 1.64
COL16A1-204ENST00000440437 AMOTL2Q9Y2J4 779 aa25.29■■□□□ 1.64
COL16A1-204ENST00000440437 SLAIN2Q9P270 581 aa25.28■■□□□ 1.64
COL16A1-204ENST00000440437 METP08581 1390 aa25.27■■□□□ 1.64
COL16A1-204ENST00000440437 COL16A1Q07092 1604 aaPredicted RBP25.26■■□□□ 1.63
COL16A1-204ENST00000440437 DCCP43146 1447 aa25.23■■□□□ 1.63
COL16A1-204ENST00000440437 C19orf44Q9H6X5 657 aa25.23■■□□□ 1.63
COL16A1-204ENST00000440437 C14orf37Q86TY3 774 aa25.22■■□□□ 1.63
COL16A1-204ENST00000440437 PHF23Q9BUL5 403 aaPredicted RBP25.22■■□□□ 1.63
COL16A1-204ENST00000440437 NALCNQ8IZF0 1738 aa25.22■■□□□ 1.63
COL16A1-204ENST00000440437 AHDC1Q5TGY3 1603 aaPredicted RBP25.22■■□□□ 1.63
COL16A1-204ENST00000440437 IFT172Q9UG01 1749 aa25.21■■□□□ 1.63
COL16A1-204ENST00000440437 CADPS2Q86UW7 1296 aa25.2■■□□□ 1.62
COL16A1-204ENST00000440437 FOXD1Q16676 465 aa25.19■■□□□ 1.62
COL16A1-204ENST00000440437 RPGRIP1LQ68CZ1 1315 aa25.18■■□□□ 1.62
COL16A1-204ENST00000440437 ATF3P18847 181 aa25.17■■□□□ 1.62
COL16A1-204ENST00000440437 VGFO15240 615 aaPredicted RBP25.16■■□□□ 1.62
COL16A1-204ENST00000440437 CCDC144AA2RUR9 1427 aa25.15■■□□□ 1.62
COL16A1-204ENST00000440437 PRAG1Q86YV5 1406 aa25.15■■□□□ 1.62
COL16A1-204ENST00000440437 ADGRL3Q9HAR2 1447 aa25.15■■□□□ 1.62
COL16A1-204ENST00000440437 PTCH1Q13635 1447 aa25.14■■□□□ 1.62
COL16A1-204ENST00000440437 MPHOSPH9Q99550 1183 aa25.14■■□□□ 1.62
COL16A1-204ENST00000440437 SHPRHQ149N8 1683 aa25.13■■□□□ 1.61
COL16A1-204ENST00000440437 MST1RQ04912 1400 aa25.13■■□□□ 1.61
COL16A1-204ENST00000440437 SPATA31E1Q6ZUB1 1445 aa25.13■■□□□ 1.61
COL16A1-204ENST00000440437 NHSL1Q5SYE7 1610 aa25.13■■□□□ 1.61
COL16A1-204ENST00000440437 JCADQ9P266 1359 aa25.13■■□□□ 1.61
COL16A1-204ENST00000440437 SETD5Q9C0A6 1442 aa25.12■■□□□ 1.61
COL16A1-204ENST00000440437 RGS17Q9UGC6 210 aaPredicted RBP25.12■■□□□ 1.61
COL16A1-204ENST00000440437 ASXL1Q8IXJ9 1541 aa25.12■■□□□ 1.61
COL16A1-204ENST00000440437 BRINP3Q76B58 766 aa25.09■■□□□ 1.61
COL16A1-204ENST00000440437 ACIN1Q9UKV3 1341 aaKnown RBP25.08■■□□□ 1.6
COL16A1-204ENST00000440437 ROBO2Q9HCK4 1378 aa25.06■■□□□ 1.6
COL16A1-204ENST00000440437 LRP6O75581 1613 aa25.04■■□□□ 1.6
COL16A1-204ENST00000440437 RAB3GAP2Q9H2M9 1393 aa25.04■■□□□ 1.6
COL16A1-204ENST00000440437 KNDC1Q76NI1 1749 aa25.03■■□□□ 1.6
COL16A1-204ENST00000440437 ADGRF5Q8IZF2 1346 aa25.03■■□□□ 1.6
COL16A1-204ENST00000440437 ANKRD30BQ9BXX2 1392 aa25.03■■□□□ 1.6
COL16A1-204ENST00000440437 LAMC1P11047 1609 aa25.02■■□□□ 1.6
COL16A1-204ENST00000440437 PIK3C2GO75747 1445 aa25.01■■□□□ 1.59
COL16A1-204ENST00000440437 RGL3Q3MIN7 710 aa25■■□□□ 1.59
COL16A1-204ENST00000440437 SPATA31A6Q5VVP1 1343 aa25■■□□□ 1.59
COL16A1-204ENST00000440437 C1orf167Q5SNV9 1468 aa24.99■■□□□ 1.59
COL16A1-204ENST00000440437 CDC42BPGQ6DT37 1551 aa24.97■■□□□ 1.59
COL16A1-204ENST00000440437 TECPR2O15040 1411 aa24.97■■□□□ 1.59
COL16A1-204ENST00000440437 POTEAQ6S8J7 498 aa24.96■■□□□ 1.59
COL16A1-204ENST00000440437 MYOM2P54296 1465 aa24.95■■□□□ 1.58
COL16A1-204ENST00000440437 NRXN1Q9ULB1 1477 aa24.95■■□□□ 1.58
COL16A1-204ENST00000440437 LRPPRCP42704 1394 aaKnown RBP24.92■■□□□ 1.58
COL16A1-204ENST00000440437 DDX17Q92841 729 aaKnown RBP24.9■■□□□ 1.58
COL16A1-204ENST00000440437 ABCC11Q96J66 1382 aa24.89■■□□□ 1.57
COL16A1-204ENST00000440437 PNPLA6Q8IY17 1366 aa24.87■■□□□ 1.57
COL16A1-204ENST00000440437 YTHDC2Q9H6S0 1430 aaKnown RBP24.86■■□□□ 1.57
COL16A1-204ENST00000440437 FMN2Q9NZ56 1722 aa24.86■■□□□ 1.57
COL16A1-204ENST00000440437 LRRC59Q96AG4 307 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms