RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 PPP1R15AO75807 674 aaPredicted RBP31.71■■■□□ 2.67
CPNE1-219ENST00000440240 PPARGC1BQ86YN6 1023 aaKnown RBP31.7■■■□□ 2.67
CPNE1-219ENST00000440240 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.7■■■□□ 2.67
CPNE1-219ENST00000440240 ZFYVE9O95405 1425 aa31.69■■■□□ 2.66
CPNE1-219ENST00000440240 CHGAP10645 457 aaKnown RBP31.69■■■□□ 2.66
CPNE1-219ENST00000440240 GCC2Q8IWJ2 1684 aa31.69■■■□□ 2.66
CPNE1-219ENST00000440240 NUP155O75694 1391 aa31.68■■■□□ 2.66
CPNE1-219ENST00000440240 PLEKHG1Q9ULL1 1385 aa31.68■■■□□ 2.66
CPNE1-219ENST00000440240 RIMS2Q9UQ26 1411 aa31.67■■■□□ 2.66
CPNE1-219ENST00000440240 XIRP1Q702N8 1843 aaKnown RBP31.67■■■□□ 2.66
CPNE1-219ENST00000440240 PHF23Q9BUL5 403 aaPredicted RBP31.66■■■□□ 2.66
CPNE1-219ENST00000440240 FAM135BQ49AJ0 1406 aa31.66■■■□□ 2.66
CPNE1-219ENST00000440240 TMEM131LA2VDJ0 1609 aa31.64■■■□□ 2.65
CPNE1-219ENST00000440240 RBM33Q96EV2 1170 aaKnown RBP31.63■■■□□ 2.65
CPNE1-219ENST00000440240 TBX22Q9Y458 520 aa31.63■■■□□ 2.65
CPNE1-219ENST00000440240 NKTRP30414 1462 aaKnown RBP31.63■■■□□ 2.65
CPNE1-219ENST00000440240 IQGAP3Q86VI3 1631 aa31.61■■■□□ 2.65
CPNE1-219ENST00000440240 E9PCH4 1651 aa31.6■■■□□ 2.65
CPNE1-219ENST00000440240 NWD1Q149M9 1564 aa31.58■■■□□ 2.65
CPNE1-219ENST00000440240 MSH6P52701 1360 aa31.57■■■□□ 2.64
CPNE1-219ENST00000440240 MYO5BQ9ULV0 1848 aa31.57■■■□□ 2.64
CPNE1-219ENST00000440240 NUTM2DQ5VT03 806 aaPredicted RBP31.54■■■□□ 2.64
CPNE1-219ENST00000440240 SLAIN2Q9P270 581 aa31.52■■■□□ 2.64
CPNE1-219ENST00000440240 CHD2O14647 1828 aaKnown RBP31.49■■■□□ 2.63
CPNE1-219ENST00000440240 PIK3R4Q99570 1358 aa31.49■■■□□ 2.63
CPNE1-219ENST00000440240 NCOA3Q9Y6Q9 1424 aa31.49■■■□□ 2.63
CPNE1-219ENST00000440240 ADAMTS13Q76LX8 1427 aa31.48■■■□□ 2.63
CPNE1-219ENST00000440240 C14orf37Q86TY3 774 aa31.45■■■□□ 2.63
CPNE1-219ENST00000440240 RRBP1Q9P2E9 1410 aaKnown RBP31.45■■■□□ 2.63
CPNE1-219ENST00000440240 ROBO1Q9Y6N7 1651 aa31.44■■■□□ 2.62
CPNE1-219ENST00000440240 DIP2AQ14689 1571 aa31.43■■■□□ 2.62
CPNE1-219ENST00000440240 C19orf44Q9H6X5 657 aa31.41■■■□□ 2.62
CPNE1-219ENST00000440240 ZNF326Q5BKZ1 582 aaKnown RBP31.4■■■□□ 2.62
CPNE1-219ENST00000440240 AMOTL2Q9Y2J4 779 aa31.4■■■□□ 2.62
CPNE1-219ENST00000440240 CADPS2Q86UW7 1296 aa31.38■■■□□ 2.61
CPNE1-219ENST00000440240 RGS17Q9UGC6 210 aaPredicted RBP31.37■■■□□ 2.61
CPNE1-219ENST00000440240 NAIPQ13075 1403 aa31.36■■■□□ 2.61
CPNE1-219ENST00000440240 ATF3P18847 181 aa31.36■■■□□ 2.61
CPNE1-219ENST00000440240 TRPM2O94759 1503 aa31.35■■■□□ 2.61
CPNE1-219ENST00000440240 SPHKAPQ2M3C7 1700 aa31.34■■■□□ 2.61
CPNE1-219ENST00000440240 PTPRUQ92729 1446 aa31.3■■■□□ 2.6
CPNE1-219ENST00000440240 TRIM52Q96A61 297 aa31.29■■■□□ 2.6
CPNE1-219ENST00000440240 JCADQ9P266 1359 aa31.29■■■□□ 2.6
CPNE1-219ENST00000440240 SETBP1Q9Y6X0 1596 aa31.26■■■□□ 2.6
CPNE1-219ENST00000440240 PHLPP1O60346 1717 aa31.25■■■□□ 2.59
CPNE1-219ENST00000440240 HFM1A2PYH4 1435 aa31.24■■■□□ 2.59
CPNE1-219ENST00000440240 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.24■■■□□ 2.59
CPNE1-219ENST00000440240 METP08581 1390 aa31.21■■■□□ 2.59
CPNE1-219ENST00000440240 SLC4A1APQ9BWU0 796 aaKnown RBP31.21■■■□□ 2.59
CPNE1-219ENST00000440240 CLTCL1P53675 1640 aa31.2■■■□□ 2.59
CPNE1-219ENST00000440240 NRXN3Q9Y4C0 1643 aa31.2■■■□□ 2.59
CPNE1-219ENST00000440240 VGFO15240 615 aaPredicted RBP31.2■■■□□ 2.59
CPNE1-219ENST00000440240 DCCP43146 1447 aa31.19■■■□□ 2.58
CPNE1-219ENST00000440240 POTEAQ6S8J7 498 aa31.19■■■□□ 2.58
CPNE1-219ENST00000440240 BRINP3Q76B58 766 aa31.17■■■□□ 2.58
CPNE1-219ENST00000440240 SPATA31A6Q5VVP1 1343 aa31.17■■■□□ 2.58
CPNE1-219ENST00000440240 NEXMIFQ5QGS0 1516 aa31.16■■■□□ 2.58
CPNE1-219ENST00000440240 COL16A1Q07092 1604 aaPredicted RBP31.15■■■□□ 2.58
CPNE1-219ENST00000440240 XRN1Q8IZH2 1706 aaKnown RBP31.15■■■□□ 2.58
CPNE1-219ENST00000440240 RPGRIP1LQ68CZ1 1315 aa31.14■■■□□ 2.58
CPNE1-219ENST00000440240 KIF1BO60333 1816 aa31.13■■■□□ 2.57
CPNE1-219ENST00000440240 AHDC1Q5TGY3 1603 aaPredicted RBP31.12■■■□□ 2.57
CPNE1-219ENST00000440240 MEX3CQ5U5Q3 659 aaKnown RBP31.07■■■□□ 2.56
CPNE1-219ENST00000440240 MST1RQ04912 1400 aa31.06■■■□□ 2.56
CPNE1-219ENST00000440240 ADGRL3Q9HAR2 1447 aa31.06■■■□□ 2.56
CPNE1-219ENST00000440240 LRRC59Q96AG4 307 aaKnown RBP31.02■■■□□ 2.56
CPNE1-219ENST00000440240 ZNF772Q68DY9 489 aaPredicted RBP31.01■■■□□ 2.55
CPNE1-219ENST00000440240 ASXL1Q8IXJ9 1541 aa31.01■■■□□ 2.55
CPNE1-219ENST00000440240 LRP6O75581 1613 aa30.99■■■□□ 2.55
CPNE1-219ENST00000440240 FOXD1Q16676 465 aa30.99■■■□□ 2.55
CPNE1-219ENST00000440240 SETD5Q9C0A6 1442 aa30.98■■■□□ 2.55
CPNE1-219ENST00000440240 SHPRHQ149N8 1683 aa30.98■■■□□ 2.55
CPNE1-219ENST00000440240 PTCH1Q13635 1447 aa30.98■■■□□ 2.55
CPNE1-219ENST00000440240 MPHOSPH9Q99550 1183 aa30.97■■■□□ 2.55
CPNE1-219ENST00000440240 NUTM2BA6NNL0 878 aaPredicted RBP30.96■■■□□ 2.55
CPNE1-219ENST00000440240 NUTM2EB1AL46 878 aaPredicted RBP30.96■■■□□ 2.55
CPNE1-219ENST00000440240 NUTM2AQ8IVF1 878 aaPredicted RBP30.96■■■□□ 2.55
CPNE1-219ENST00000440240 ROBO2Q9HCK4 1378 aa30.95■■■□□ 2.55
CPNE1-219ENST00000440240 ACIN1Q9UKV3 1341 aaKnown RBP30.95■■■□□ 2.54
CPNE1-219ENST00000440240 CCDC144AA2RUR9 1427 aa30.94■■■□□ 2.54
CPNE1-219ENST00000440240 PRAG1Q86YV5 1406 aa30.92■■■□□ 2.54
CPNE1-219ENST00000440240 RGL3Q3MIN7 710 aa30.91■■■□□ 2.54
CPNE1-219ENST00000440240 NALCNQ8IZF0 1738 aa30.9■■■□□ 2.54
CPNE1-219ENST00000440240 C1orf167Q5SNV9 1468 aa30.9■■■□□ 2.54
CPNE1-219ENST00000440240 DDX17Q92841 729 aaKnown RBP30.9■■■□□ 2.54
CPNE1-219ENST00000440240 NHSL1Q5SYE7 1610 aa30.89■■■□□ 2.54
CPNE1-219ENST00000440240 SETD1AO15047 1707 aaKnown RBP30.89■■■□□ 2.54
CPNE1-219ENST00000440240 PPLO60437 1756 aa30.89■■■□□ 2.54
CPNE1-219ENST00000440240 ADGRF5Q8IZF2 1346 aa30.87■■■□□ 2.53
CPNE1-219ENST00000440240 ANKRD30BQ9BXX2 1392 aa30.86■■■□□ 2.53
CPNE1-219ENST00000440240 ORAI2Q96SN7 254 aa30.85■■■□□ 2.53
CPNE1-219ENST00000440240 RXRBP28702 533 aa30.84■■■□□ 2.53
CPNE1-219ENST00000440240 SPATA31E1Q6ZUB1 1445 aa30.83■■■□□ 2.53
CPNE1-219ENST00000440240 PNPLA6Q8IY17 1366 aa30.82■■■□□ 2.52
CPNE1-219ENST00000440240 AFF2P51816 1311 aa30.81■■■□□ 2.52
CPNE1-219ENST00000440240 SOS2Q07890 1332 aaPredicted RBP30.8■■■□□ 2.52
CPNE1-219ENST00000440240 STK26Q9P289 416 aa30.79■■■□□ 2.52
CPNE1-219ENST00000440240 C8orf37Q96NL8 207 aa30.77■■■□□ 2.52
CPNE1-219ENST00000440240 ESCO1Q5FWF5 840 aa30.75■■■□□ 2.51
CPNE1-219ENST00000440240 LRPPRCP42704 1394 aaKnown RBP30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms