RNA–Protein interactions for RNA: ENST00000440234.6

RBM38-205, Transcript of RNA binding motif protein 38, human

TSL 2 BASIC

Gene RBM38, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM38-205	ENST00000440234	PROSER2	Q86WR7	435 aa	Predicted RBP	33.45	■■■□□ 2.95
RBM38-205	ENST00000440234	GCC2	Q8IWJ2	1684 aa		33.45	■■■□□ 2.94
RBM38-205	ENST00000440234	TMEM94	Q12767	1356 aa		33.45	■■■□□ 2.94
RBM38-205	ENST00000440234	ZFYVE9	O95405	1425 aa		33.45	■■■□□ 2.94
RBM38-205	ENST00000440234	RIMS2	Q9UQ26	1411 aa		33.44	■■■□□ 2.94
RBM38-205	ENST00000440234	PPP1R15A	O75807	674 aa	Predicted RBP	33.43	■■■□□ 2.94
RBM38-205	ENST00000440234	SENP3	Q9H4L4	574 aa	Predicted RBP	33.42	■■■□□ 2.94
RBM38-205	ENST00000440234	PLEKHG1	Q9ULL1	1385 aa		33.42	■■■□□ 2.94
RBM38-205	ENST00000440234	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.41	■■■□□ 2.94
RBM38-205	ENST00000440234	IQGAP3	Q86VI3	1631 aa		33.4	■■■□□ 2.94
RBM38-205	ENST00000440234		E9PCH4	1651 aa		33.39	■■■□□ 2.94
RBM38-205	ENST00000440234	TMEM131L	A2VDJ0	1609 aa		33.39	■■■□□ 2.94
RBM38-205	ENST00000440234	XIRP1	Q702N8	1843 aa	Known RBP	33.37	■■■□□ 2.93
RBM38-205	ENST00000440234	RBM33	Q96EV2	1170 aa	Known RBP	33.37	■■■□□ 2.93
RBM38-205	ENST00000440234	TBX22	Q9Y458	520 aa		33.36	■■■□□ 2.93
RBM38-205	ENST00000440234	MED1	Q15648	1581 aa	Predicted RBP	33.33	■■■□□ 2.93
RBM38-205	ENST00000440234	FAM135B	Q49AJ0	1406 aa		33.32	■■■□□ 2.92
RBM38-205	ENST00000440234	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.32	■■■□□ 2.92
RBM38-205	ENST00000440234	NKTR	P30414	1462 aa	Known RBP	33.31	■■■□□ 2.92
RBM38-205	ENST00000440234	MYO5B	Q9ULV0	1848 aa		33.31	■■■□□ 2.92
RBM38-205	ENST00000440234	NWD1	Q149M9	1564 aa		33.29	■■■□□ 2.92
RBM38-205	ENST00000440234	MSH6	P52701	1360 aa		33.23	■■■□□ 2.91
RBM38-205	ENST00000440234	ADAMTS13	Q76LX8	1427 aa		33.23	■■■□□ 2.91
RBM38-205	ENST00000440234	PHF23	Q9BUL5	403 aa	Predicted RBP	33.22	■■■□□ 2.91
RBM38-205	ENST00000440234	NAIP	Q13075	1403 aa		33.19	■■■□□ 2.9
RBM38-205	ENST00000440234	CHD2	O14647	1828 aa	Known RBP	33.19	■■■□□ 2.9
RBM38-205	ENST00000440234	SLAIN2	Q9P270	581 aa		33.19	■■■□□ 2.9
RBM38-205	ENST00000440234	PIK3R4	Q99570	1358 aa		33.18	■■■□□ 2.9
RBM38-205	ENST00000440234	NCOA3	Q9Y6Q9	1424 aa		33.16	■■■□□ 2.9
RBM38-205	ENST00000440234	ZNF326	Q5BKZ1	582 aa	Known RBP	33.14	■■■□□ 2.9
RBM38-205	ENST00000440234	AMOTL2	Q9Y2J4	779 aa		33.12	■■■□□ 2.89
RBM38-205	ENST00000440234	DIP2A	Q14689	1571 aa		33.12	■■■□□ 2.89
RBM38-205	ENST00000440234	C14orf37	Q86TY3	774 aa		33.11	■■■□□ 2.89
RBM38-205	ENST00000440234	SPHKAP	Q2M3C7	1700 aa		33.09	■■■□□ 2.89
RBM38-205	ENST00000440234	TRIM52	Q96A61	297 aa		33.09	■■■□□ 2.89
RBM38-205	ENST00000440234	C19orf44	Q9H6X5	657 aa		33.09	■■■□□ 2.89
RBM38-205	ENST00000440234	ROBO1	Q9Y6N7	1651 aa		33.09	■■■□□ 2.89
RBM38-205	ENST00000440234	HFM1	A2PYH4	1435 aa		33.06	■■■□□ 2.88
RBM38-205	ENST00000440234	PTPRU	Q92729	1446 aa		33.05	■■■□□ 2.88
RBM38-205	ENST00000440234	TRIM26	Q12899	539 aa	Predicted RBP	33.05	■■■□□ 2.88
RBM38-205	ENST00000440234	TRPM2	O94759	1503 aa		33.05	■■■□□ 2.88
RBM38-205	ENST00000440234	CADPS2	Q86UW7	1296 aa		33.04	■■■□□ 2.88
RBM38-205	ENST00000440234	ATF3	P18847	181 aa		33.02	■■■□□ 2.88
RBM38-205	ENST00000440234	RGS17	Q9UGC6	210 aa	Predicted RBP	33.02	■■■□□ 2.88
RBM38-205	ENST00000440234	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33	■■■□□ 2.87
RBM38-205	ENST00000440234	SETBP1	Q9Y6X0	1596 aa		32.99	■■■□□ 2.87
RBM38-205	ENST00000440234	CLTCL1	P53675	1640 aa		32.98	■■■□□ 2.87
RBM38-205	ENST00000440234	MET	P08581	1390 aa		32.96	■■■□□ 2.87
RBM38-205	ENST00000440234	NRXN3	Q9Y4C0	1643 aa		32.95	■■■□□ 2.87
RBM38-205	ENST00000440234	JCAD	Q9P266	1359 aa		32.92	■■■□□ 2.86
RBM38-205	ENST00000440234	NEXMIF	Q5QGS0	1516 aa		32.92	■■■□□ 2.86
RBM38-205	ENST00000440234	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.91	■■■□□ 2.86
RBM38-205	ENST00000440234	VGF	O15240	615 aa	Predicted RBP	32.91	■■■□□ 2.86
RBM38-205	ENST00000440234	RPGRIP1L	Q68CZ1	1315 aa		32.88	■■■□□ 2.85
RBM38-205	ENST00000440234	PHLPP1	O60346	1717 aa		32.88	■■■□□ 2.85
RBM38-205	ENST00000440234	XRN1	Q8IZH2	1706 aa	Known RBP	32.86	■■■□□ 2.85
RBM38-205	ENST00000440234	DCC	P43146	1447 aa		32.85	■■■□□ 2.85
RBM38-205	ENST00000440234	BRINP3	Q76B58	766 aa		32.85	■■■□□ 2.85
RBM38-205	ENST00000440234	KIF1B	O60333	1816 aa		32.85	■■■□□ 2.85
RBM38-205	ENST00000440234	FOXD1	Q16676	465 aa		32.82	■■■□□ 2.84
RBM38-205	ENST00000440234	POTEA	Q6S8J7	498 aa		32.82	■■■□□ 2.84
RBM38-205	ENST00000440234	COL16A1	Q07092	1604 aa	Predicted RBP	32.8	■■■□□ 2.84
RBM38-205	ENST00000440234	SETD5	Q9C0A6	1442 aa		32.79	■■■□□ 2.84
RBM38-205	ENST00000440234	SPATA31A6	Q5VVP1	1343 aa		32.77	■■■□□ 2.84
RBM38-205	ENST00000440234	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.77	■■■□□ 2.84
RBM38-205	ENST00000440234	MPHOSPH9	Q99550	1183 aa		32.77	■■■□□ 2.84
RBM38-205	ENST00000440234	MST1R	Q04912	1400 aa		32.76	■■■□□ 2.83
RBM38-205	ENST00000440234	ADGRL3	Q9HAR2	1447 aa		32.75	■■■□□ 2.83
RBM38-205	ENST00000440234	CCDC144A	A2RUR9	1427 aa		32.69	■■■□□ 2.82
RBM38-205	ENST00000440234	ROBO2	Q9HCK4	1378 aa		32.69	■■■□□ 2.82
RBM38-205	ENST00000440234	RGL3	Q3MIN7	710 aa		32.68	■■■□□ 2.82
RBM38-205	ENST00000440234	RAB3GAP2	Q9H2M9	1393 aa		32.68	■■■□□ 2.82
RBM38-205	ENST00000440234	PTCH1	Q13635	1447 aa		32.68	■■■□□ 2.82
RBM38-205	ENST00000440234	ASXL1	Q8IXJ9	1541 aa		32.67	■■■□□ 2.82
RBM38-205	ENST00000440234	ACIN1	Q9UKV3	1341 aa	Known RBP	32.67	■■■□□ 2.82
RBM38-205	ENST00000440234	MEX3C	Q5U5Q3	659 aa	Known RBP	32.66	■■■□□ 2.82
RBM38-205	ENST00000440234	PCGF6	Q9BYE7	350 aa		32.65	■■■□□ 2.82
RBM38-205	ENST00000440234	LRP6	O75581	1613 aa		32.65	■■■□□ 2.82
RBM38-205	ENST00000440234	ADGRF5	Q8IZF2	1346 aa		32.64	■■■□□ 2.82
RBM38-205	ENST00000440234	LRRC59	Q96AG4	307 aa	Known RBP	32.64	■■■□□ 2.82
RBM38-205	ENST00000440234	PRAG1	Q86YV5	1406 aa		32.63	■■■□□ 2.81
RBM38-205	ENST00000440234	SETD1A	O15047	1707 aa	Known RBP	32.63	■■■□□ 2.81
RBM38-205	ENST00000440234	SPATA31E1	Q6ZUB1	1445 aa		32.62	■■■□□ 2.81
RBM38-205	ENST00000440234	PPL	O60437	1756 aa		32.62	■■■□□ 2.81
RBM38-205	ENST00000440234	DDX17	Q92841	729 aa	Known RBP	32.61	■■■□□ 2.81
RBM38-205	ENST00000440234	NALCN	Q8IZF0	1738 aa		32.6	■■■□□ 2.81
RBM38-205	ENST00000440234	SHPRH	Q149N8	1683 aa		32.59	■■■□□ 2.81
RBM38-205	ENST00000440234	ANKRD30B	Q9BXX2	1392 aa		32.59	■■■□□ 2.81
RBM38-205	ENST00000440234	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.59	■■■□□ 2.81
RBM38-205	ENST00000440234	NUTM2E	B1AL46	878 aa	Predicted RBP	32.59	■■■□□ 2.81
RBM38-205	ENST00000440234	ZNF772	Q68DY9	489 aa	Predicted RBP	32.59	■■■□□ 2.81
RBM38-205	ENST00000440234	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.59	■■■□□ 2.81
RBM38-205	ENST00000440234	C1orf167	Q5SNV9	1468 aa		32.59	■■■□□ 2.81
RBM38-205	ENST00000440234	HRC	P23327	699 aa		32.57	■■■□□ 2.8
RBM38-205	ENST00000440234	ORAI2	Q96SN7	254 aa		32.55	■■■□□ 2.8
RBM38-205	ENST00000440234	NHSL1	Q5SYE7	1610 aa		32.55	■■■□□ 2.8
RBM38-205	ENST00000440234	STK26	Q9P289	416 aa		32.51	■■■□□ 2.79
RBM38-205	ENST00000440234	TMEM132E	Q6IEE7	984 aa		32.49	■■■□□ 2.79
RBM38-205	ENST00000440234	PNPLA6	Q8IY17	1366 aa		32.48	■■■□□ 2.79
RBM38-205	ENST00000440234	SOS2	Q07890	1332 aa	Predicted RBP	32.48	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms