RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 NKTRP30414 1462 aaKnown RBP9.55□□□□□ -0.88
PNKDP1-201ENST00000435914 TMEM94Q12767 1356 aa9.55□□□□□ -0.88
PNKDP1-201ENST00000435914 CHD2O14647 1828 aaKnown RBP9.55□□□□□ -0.88
PNKDP1-201ENST00000435914 SLC26A8Q96RN1 970 aa9.55□□□□□ -0.88
PNKDP1-201ENST00000435914 STAG3Q9UJ98 1225 aa9.55□□□□□ -0.88
PNKDP1-201ENST00000435914 PLEKHG1Q9ULL1 1385 aa9.54□□□□□ -0.88
PNKDP1-201ENST00000435914 FAM135BQ49AJ0 1406 aa9.54□□□□□ -0.88
PNKDP1-201ENST00000435914 RIMS2Q9UQ26 1411 aa9.54□□□□□ -0.88
PNKDP1-201ENST00000435914 ADAMTS13Q76LX8 1427 aa9.53□□□□□ -0.88
PNKDP1-201ENST00000435914 RRBP1Q9P2E9 1410 aaKnown RBP9.51□□□□□ -0.89
PNKDP1-201ENST00000435914 ROBO1Q9Y6N7 1651 aa9.51□□□□□ -0.89
PNKDP1-201ENST00000435914 NUP155O75694 1391 aa9.5□□□□□ -0.89
PNKDP1-201ENST00000435914 PROSER2Q86WR7 435 aaPredicted RBP9.5□□□□□ -0.89
PNKDP1-201ENST00000435914 RBM33Q96EV2 1170 aaKnown RBP9.5□□□□□ -0.89
PNKDP1-201ENST00000435914 TBX22Q9Y458 520 aa9.5□□□□□ -0.89
PNKDP1-201ENST00000435914 DIP2AQ14689 1571 aa9.5□□□□□ -0.89
PNKDP1-201ENST00000435914 NRXN3Q9Y4C0 1643 aa9.49□□□□□ -0.89
PNKDP1-201ENST00000435914 SPHKAPQ2M3C7 1700 aa9.49□□□□□ -0.89
PNKDP1-201ENST00000435914 PPARGC1BQ86YN6 1023 aaKnown RBP9.49□□□□□ -0.89
PNKDP1-201ENST00000435914 NCOA3Q9Y6Q9 1424 aa9.48□□□□□ -0.89
PNKDP1-201ENST00000435914 RGS17Q9UGC6 210 aaPredicted RBP9.48□□□□□ -0.89
PNKDP1-201ENST00000435914 PIK3R4Q99570 1358 aa9.48□□□□□ -0.89
PNKDP1-201ENST00000435914 NAIPQ13075 1403 aa9.48□□□□□ -0.89
PNKDP1-201ENST00000435914 PTPRUQ92729 1446 aa9.48□□□□□ -0.89
PNKDP1-201ENST00000435914 ITGAEP38570 1179 aa9.47□□□□□ -0.89
PNKDP1-201ENST00000435914 HDGFP51858 240 aaKnown RBP9.47□□□□□ -0.89
PNKDP1-201ENST00000435914 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.47□□□□□ -0.89
PNKDP1-201ENST00000435914 SETBP1Q9Y6X0 1596 aa9.46□□□□□ -0.89
PNKDP1-201ENST00000435914 XRN1Q8IZH2 1706 aaKnown RBP9.46□□□□□ -0.89
PNKDP1-201ENST00000435914 PPP1R15AO75807 674 aaPredicted RBP9.46□□□□□ -0.9
PNKDP1-201ENST00000435914 SENP3Q9H4L4 574 aaPredicted RBP9.46□□□□□ -0.9
PNKDP1-201ENST00000435914 MSH6P52701 1360 aa9.46□□□□□ -0.9
PNKDP1-201ENST00000435914 CLTCL1P53675 1640 aa9.45□□□□□ -0.9
PNKDP1-201ENST00000435914 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.45□□□□□ -0.9
PNKDP1-201ENST00000435914 CHGAP10645 457 aaKnown RBP9.45□□□□□ -0.9
PNKDP1-201ENST00000435914 NUTM2DQ5VT03 806 aaPredicted RBP9.45□□□□□ -0.9
PNKDP1-201ENST00000435914 SLAIN2Q9P270 581 aa9.45□□□□□ -0.9
PNKDP1-201ENST00000435914 TRPM2O94759 1503 aa9.45□□□□□ -0.9
PNKDP1-201ENST00000435914 NEXMIFQ5QGS0 1516 aa9.45□□□□□ -0.9
PNKDP1-201ENST00000435914 COL16A1Q07092 1604 aaPredicted RBP9.45□□□□□ -0.9
PNKDP1-201ENST00000435914 BCANQ96GW7 911 aa9.44□□□□□ -0.9
PNKDP1-201ENST00000435914 PHLPP1O60346 1717 aa9.43□□□□□ -0.9
PNKDP1-201ENST00000435914 HFM1A2PYH4 1435 aa9.43□□□□□ -0.9
PNKDP1-201ENST00000435914 PHF23Q9BUL5 403 aaPredicted RBP9.43□□□□□ -0.9
PNKDP1-201ENST00000435914 AHDC1Q5TGY3 1603 aaPredicted RBP9.42□□□□□ -0.9
PNKDP1-201ENST00000435914 SETD1AO15047 1707 aaKnown RBP9.42□□□□□ -0.9
PNKDP1-201ENST00000435914 METP08581 1390 aa9.41□□□□□ -0.9
PNKDP1-201ENST00000435914 C19orf44Q9H6X5 657 aa9.41□□□□□ -0.9
PNKDP1-201ENST00000435914 AMOTL2Q9Y2J4 779 aa9.41□□□□□ -0.9
PNKDP1-201ENST00000435914 DCCP43146 1447 aa9.4□□□□□ -0.9
PNKDP1-201ENST00000435914 KIF1BO60333 1816 aa9.4□□□□□ -0.9
PNKDP1-201ENST00000435914 JCADQ9P266 1359 aa9.39□□□□□ -0.91
PNKDP1-201ENST00000435914 POTEAQ6S8J7 498 aa9.39□□□□□ -0.91
PNKDP1-201ENST00000435914 CADPS2Q86UW7 1296 aa9.39□□□□□ -0.91
PNKDP1-201ENST00000435914 PRAG1Q86YV5 1406 aa9.39□□□□□ -0.91
PNKDP1-201ENST00000435914 SHPRHQ149N8 1683 aa9.39□□□□□ -0.91
PNKDP1-201ENST00000435914 LRP6O75581 1613 aa9.38□□□□□ -0.91
PNKDP1-201ENST00000435914 NALCNQ8IZF0 1738 aa9.38□□□□□ -0.91
PNKDP1-201ENST00000435914 MST1RQ04912 1400 aa9.38□□□□□ -0.91
PNKDP1-201ENST00000435914 BRINP3Q76B58 766 aa9.37□□□□□ -0.91
PNKDP1-201ENST00000435914 NHSL1Q5SYE7 1610 aa9.37□□□□□ -0.91
PNKDP1-201ENST00000435914 ADGRL3Q9HAR2 1447 aa9.37□□□□□ -0.91
PNKDP1-201ENST00000435914 PPLO60437 1756 aa9.37□□□□□ -0.91
PNKDP1-201ENST00000435914 ASXL1Q8IXJ9 1541 aa9.36□□□□□ -0.91
PNKDP1-201ENST00000435914 ATF3P18847 181 aa9.36□□□□□ -0.91
PNKDP1-201ENST00000435914 ZNF326Q5BKZ1 582 aaKnown RBP9.36□□□□□ -0.91
PNKDP1-201ENST00000435914 SPATA31A6Q5VVP1 1343 aa9.35□□□□□ -0.91
PNKDP1-201ENST00000435914 LAMC1P11047 1609 aa9.35□□□□□ -0.91
PNKDP1-201ENST00000435914 PTCH1Q13635 1447 aa9.35□□□□□ -0.91
PNKDP1-201ENST00000435914 C14orf37Q86TY3 774 aa9.35□□□□□ -0.91
PNKDP1-201ENST00000435914 SETD5Q9C0A6 1442 aa9.35□□□□□ -0.91
PNKDP1-201ENST00000435914 RPGRIP1LQ68CZ1 1315 aa9.34□□□□□ -0.91
PNKDP1-201ENST00000435914 SLC4A1APQ9BWU0 796 aaKnown RBP9.34□□□□□ -0.91
PNKDP1-201ENST00000435914 ROBO2Q9HCK4 1378 aa9.34□□□□□ -0.91
PNKDP1-201ENST00000435914 IFT172Q9UG01 1749 aa9.34□□□□□ -0.92
PNKDP1-201ENST00000435914 SPATA31E1Q6ZUB1 1445 aa9.33□□□□□ -0.92
PNKDP1-201ENST00000435914 VGFO15240 615 aaPredicted RBP9.33□□□□□ -0.92
PNKDP1-201ENST00000435914 TRIM52Q96A61 297 aa9.33□□□□□ -0.92
PNKDP1-201ENST00000435914 C1orf167Q5SNV9 1468 aa9.32□□□□□ -0.92
PNKDP1-201ENST00000435914 FOXD1Q16676 465 aa9.31□□□□□ -0.92
PNKDP1-201ENST00000435914 TECPR2O15040 1411 aa9.3□□□□□ -0.92
PNKDP1-201ENST00000435914 ADGRF5Q8IZF2 1346 aa9.3□□□□□ -0.92
PNKDP1-201ENST00000435914 PNPLA6Q8IY17 1366 aa9.29□□□□□ -0.92
PNKDP1-201ENST00000435914 DDX17Q92841 729 aaKnown RBP9.29□□□□□ -0.92
PNKDP1-201ENST00000435914 MPHOSPH9Q99550 1183 aa9.29□□□□□ -0.92
PNKDP1-201ENST00000435914 CCDC144AA2RUR9 1427 aa9.29□□□□□ -0.92
PNKDP1-201ENST00000435914 CDC42BPGQ6DT37 1551 aa9.29□□□□□ -0.92
PNKDP1-201ENST00000435914 LRRC59Q96AG4 307 aaKnown RBP9.28□□□□□ -0.92
PNKDP1-201ENST00000435914 PIK3C2GO75747 1445 aa9.28□□□□□ -0.92
PNKDP1-201ENST00000435914 SOS2Q07890 1332 aaPredicted RBP9.28□□□□□ -0.92
PNKDP1-201ENST00000435914 KNDC1Q76NI1 1749 aa9.28□□□□□ -0.92
PNKDP1-201ENST00000435914 ANKRD30BQ9BXX2 1392 aa9.27□□□□□ -0.93
PNKDP1-201ENST00000435914 ZNF772Q68DY9 489 aaPredicted RBP9.27□□□□□ -0.93
PNKDP1-201ENST00000435914 ORAI2Q96SN7 254 aa9.27□□□□□ -0.93
PNKDP1-201ENST00000435914 NRXN1Q9ULB1 1477 aa9.27□□□□□ -0.93
PNKDP1-201ENST00000435914 ABCC11Q96J66 1382 aa9.26□□□□□ -0.93
PNKDP1-201ENST00000435914 COL22A1Q8NFW1 1626 aaPredicted RBP9.26□□□□□ -0.93
PNKDP1-201ENST00000435914 CDK12Q9NYV4 1490 aaPredicted RBP9.26□□□□□ -0.93
PNKDP1-201ENST00000435914 LRPPRCP42704 1394 aaKnown RBP9.25□□□□□ -0.93
PNKDP1-201ENST00000435914 AFF2P51816 1311 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms