RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 NUP155O75694 1391 aa20.91■□□□□ 0.94
PTPN7-203ENST00000435759 PPP1R15AO75807 674 aaPredicted RBP20.91■□□□□ 0.94
PTPN7-203ENST00000435759 RPRD2Q5VT52 1461 aaKnown RBP20.91■□□□□ 0.94
PTPN7-203ENST00000435759 RIMS2Q9UQ26 1411 aa20.91■□□□□ 0.94
PTPN7-203ENST00000435759 ZFYVE9O95405 1425 aa20.9■□□□□ 0.94
PTPN7-203ENST00000435759 HDGFP51858 240 aaKnown RBP20.89■□□□□ 0.93
PTPN7-203ENST00000435759 PHF23Q9BUL5 403 aaPredicted RBP20.88■□□□□ 0.93
PTPN7-203ENST00000435759 TBX22Q9Y458 520 aa20.88■□□□□ 0.93
PTPN7-203ENST00000435759 KDM5AP29375 1690 aaKnown RBP20.88■□□□□ 0.93
PTPN7-203ENST00000435759 XIRP1Q702N8 1843 aaKnown RBP20.88■□□□□ 0.93
PTPN7-203ENST00000435759 FAM135BQ49AJ0 1406 aa20.87■□□□□ 0.93
PTPN7-203ENST00000435759 PLEKHG1Q9ULL1 1385 aa20.87■□□□□ 0.93
PTPN7-203ENST00000435759 RGS17Q9UGC6 210 aaPredicted RBP20.87■□□□□ 0.93
PTPN7-203ENST00000435759 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.85■□□□□ 0.93
PTPN7-203ENST00000435759 SLAIN2Q9P270 581 aa20.85■□□□□ 0.93
PTPN7-203ENST00000435759 TMEM131LA2VDJ0 1609 aa20.82■□□□□ 0.92
PTPN7-203ENST00000435759 UNC13BO14795 1591 aa20.82■□□□□ 0.92
PTPN7-203ENST00000435759 E9PCH4 1651 aa20.8■□□□□ 0.92
PTPN7-203ENST00000435759 ADAMTS13Q76LX8 1427 aa20.79■□□□□ 0.92
PTPN7-203ENST00000435759 MSH6P52701 1360 aa20.78■□□□□ 0.92
PTPN7-203ENST00000435759 MYO5BQ9ULV0 1848 aa20.78■□□□□ 0.92
PTPN7-203ENST00000435759 AMOTL2Q9Y2J4 779 aa20.77■□□□□ 0.92
PTPN7-203ENST00000435759 GCC2Q8IWJ2 1684 aa20.76■□□□□ 0.91
PTPN7-203ENST00000435759 NKTRP30414 1462 aaKnown RBP20.75■□□□□ 0.91
PTPN7-203ENST00000435759 IQGAP3Q86VI3 1631 aa20.75■□□□□ 0.91
PTPN7-203ENST00000435759 C14orf37Q86TY3 774 aa20.75■□□□□ 0.91
PTPN7-203ENST00000435759 NWD1Q149M9 1564 aa20.75■□□□□ 0.91
PTPN7-203ENST00000435759 ZNF326Q5BKZ1 582 aaKnown RBP20.74■□□□□ 0.91
PTPN7-203ENST00000435759 PTPRUQ92729 1446 aa20.73■□□□□ 0.91
PTPN7-203ENST00000435759 POTEAQ6S8J7 498 aa20.73■□□□□ 0.91
PTPN7-203ENST00000435759 C19orf44Q9H6X5 657 aa20.72■□□□□ 0.91
PTPN7-203ENST00000435759 CHD2O14647 1828 aaKnown RBP20.7■□□□□ 0.9
PTPN7-203ENST00000435759 ROBO1Q9Y6N7 1651 aa20.7■□□□□ 0.9
PTPN7-203ENST00000435759 RRBP1Q9P2E9 1410 aaKnown RBP20.7■□□□□ 0.9
PTPN7-203ENST00000435759 ATF3P18847 181 aa20.68■□□□□ 0.9
PTPN7-203ENST00000435759 PIK3R4Q99570 1358 aa20.68■□□□□ 0.9
PTPN7-203ENST00000435759 NAIPQ13075 1403 aa20.68■□□□□ 0.9
PTPN7-203ENST00000435759 CADPS2Q86UW7 1296 aa20.67■□□□□ 0.9
PTPN7-203ENST00000435759 TRIM52Q96A61 297 aa20.67■□□□□ 0.9
PTPN7-203ENST00000435759 NCOA3Q9Y6Q9 1424 aa20.67■□□□□ 0.9
PTPN7-203ENST00000435759 METP08581 1390 aa20.66■□□□□ 0.9
PTPN7-203ENST00000435759 BRINP3Q76B58 766 aa20.62■□□□□ 0.89
PTPN7-203ENST00000435759 JCADQ9P266 1359 aa20.61■□□□□ 0.89
PTPN7-203ENST00000435759 FOXD1Q16676 465 aa20.6■□□□□ 0.89
PTPN7-203ENST00000435759 SLC4A1APQ9BWU0 796 aaKnown RBP20.59■□□□□ 0.89
PTPN7-203ENST00000435759 DIP2AQ14689 1571 aa20.59■□□□□ 0.89
PTPN7-203ENST00000435759 TRPM2O94759 1503 aa20.58■□□□□ 0.89
PTPN7-203ENST00000435759 DDX17Q92841 729 aaKnown RBP20.57■□□□□ 0.88
PTPN7-203ENST00000435759 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.57■□□□□ 0.88
PTPN7-203ENST00000435759 NRXN3Q9Y4C0 1643 aa20.56■□□□□ 0.88
PTPN7-203ENST00000435759 CLTCL1P53675 1640 aa20.56■□□□□ 0.88
PTPN7-203ENST00000435759 PHLPP1O60346 1717 aa20.56■□□□□ 0.88
PTPN7-203ENST00000435759 SPHKAPQ2M3C7 1700 aa20.55■□□□□ 0.88
PTPN7-203ENST00000435759 SETBP1Q9Y6X0 1596 aa20.55■□□□□ 0.88
PTPN7-203ENST00000435759 HFM1A2PYH4 1435 aa20.54■□□□□ 0.88
PTPN7-203ENST00000435759 VGFO15240 615 aaPredicted RBP20.54■□□□□ 0.88
PTPN7-203ENST00000435759 NEXMIFQ5QGS0 1516 aa20.53■□□□□ 0.88
PTPN7-203ENST00000435759 NUTM2BA6NNL0 878 aaPredicted RBP20.52■□□□□ 0.88
PTPN7-203ENST00000435759 NUTM2EB1AL46 878 aaPredicted RBP20.52■□□□□ 0.88
PTPN7-203ENST00000435759 NUTM2AQ8IVF1 878 aaPredicted RBP20.52■□□□□ 0.88
PTPN7-203ENST00000435759 COL16A1Q07092 1604 aaPredicted RBP20.52■□□□□ 0.88
PTPN7-203ENST00000435759 LRP6O75581 1613 aa20.51■□□□□ 0.87
PTPN7-203ENST00000435759 SPATA31A6Q5VVP1 1343 aa20.51■□□□□ 0.87
PTPN7-203ENST00000435759 MEX3CQ5U5Q3 659 aaKnown RBP20.5■□□□□ 0.87
PTPN7-203ENST00000435759 MST1RQ04912 1400 aa20.5■□□□□ 0.87
PTPN7-203ENST00000435759 RPGRIP1LQ68CZ1 1315 aa20.49■□□□□ 0.87
PTPN7-203ENST00000435759 ROBO2Q9HCK4 1378 aa20.47■□□□□ 0.87
PTPN7-203ENST00000435759 XRN1Q8IZH2 1706 aaKnown RBP20.47■□□□□ 0.87
PTPN7-203ENST00000435759 RGL3Q3MIN7 710 aa20.47■□□□□ 0.87
PTPN7-203ENST00000435759 MPHOSPH9Q99550 1183 aa20.47■□□□□ 0.87
PTPN7-203ENST00000435759 AHDC1Q5TGY3 1603 aaPredicted RBP20.46■□□□□ 0.87
PTPN7-203ENST00000435759 DCCP43146 1447 aa20.46■□□□□ 0.87
PTPN7-203ENST00000435759 ORAI2Q96SN7 254 aa20.46■□□□□ 0.87
PTPN7-203ENST00000435759 LRRC59Q96AG4 307 aaKnown RBP20.45■□□□□ 0.86
PTPN7-203ENST00000435759 ADGRF5Q8IZF2 1346 aa20.45■□□□□ 0.86
PTPN7-203ENST00000435759 ADGRL3Q9HAR2 1447 aa20.44■□□□□ 0.86
PTPN7-203ENST00000435759 ASXL1Q8IXJ9 1541 aa20.43■□□□□ 0.86
PTPN7-203ENST00000435759 ZNF772Q68DY9 489 aaPredicted RBP20.43■□□□□ 0.86
PTPN7-203ENST00000435759 SETD5Q9C0A6 1442 aa20.42■□□□□ 0.86
PTPN7-203ENST00000435759 C1orf167Q5SNV9 1468 aa20.4■□□□□ 0.86
PTPN7-203ENST00000435759 STK26Q9P289 416 aa20.4■□□□□ 0.86
PTPN7-203ENST00000435759 TMEM132EQ6IEE7 984 aa20.39■□□□□ 0.85
PTPN7-203ENST00000435759 WAPLQ7Z5K2 1190 aa20.39■□□□□ 0.85
PTPN7-203ENST00000435759 KIF1BO60333 1816 aa20.39■□□□□ 0.85
PTPN7-203ENST00000435759 AFF2P51816 1311 aa20.37■□□□□ 0.85
PTPN7-203ENST00000435759 RXRBP28702 533 aa20.37■□□□□ 0.85
PTPN7-203ENST00000435759 C8orf37Q96NL8 207 aa20.36■□□□□ 0.85
PTPN7-203ENST00000435759 PTCH1Q13635 1447 aa20.36■□□□□ 0.85
PTPN7-203ENST00000435759 PNPLA6Q8IY17 1366 aa20.35■□□□□ 0.85
PTPN7-203ENST00000435759 SPATA31E1Q6ZUB1 1445 aa20.35■□□□□ 0.85
PTPN7-203ENST00000435759 ADAMTS2O95450 1211 aa20.34■□□□□ 0.85
PTPN7-203ENST00000435759 SHPRHQ149N8 1683 aa20.34■□□□□ 0.85
PTPN7-203ENST00000435759 SOS2Q07890 1332 aaPredicted RBP20.33■□□□□ 0.85
PTPN7-203ENST00000435759 NUTM2FA1L443 756 aa20.33■□□□□ 0.85
PTPN7-203ENST00000435759 QTRT2Q9H974 415 aaKnown RBP20.33■□□□□ 0.85
PTPN7-203ENST00000435759 CCDC144AA2RUR9 1427 aa20.33■□□□□ 0.84
PTPN7-203ENST00000435759 NALCNQ8IZF0 1738 aa20.33■□□□□ 0.84
PTPN7-203ENST00000435759 ESCO1Q5FWF5 840 aa20.32■□□□□ 0.84
PTPN7-203ENST00000435759 UPF1Q92900 1129 aaKnown RBP eCLIP20.32■□□□□ 0.84
PTPN7-203ENST00000435759 SETD1AO15047 1707 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms