RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 MED1Q15648 1581 aaPredicted RBP20.06■□□□□ 0.8
CDCA4P4-201ENST00000435216 RBM33Q96EV2 1170 aaKnown RBP20.06■□□□□ 0.8
CDCA4P4-201ENST00000435216 TMEM131LA2VDJ0 1609 aa20.05■□□□□ 0.8
CDCA4P4-201ENST00000435216 CHGAP10645 457 aaKnown RBP20.05■□□□□ 0.8
CDCA4P4-201ENST00000435216 NUP155O75694 1391 aa20.05■□□□□ 0.8
CDCA4P4-201ENST00000435216 ZFYVE9O95405 1425 aa20.04■□□□□ 0.8
CDCA4P4-201ENST00000435216 SOCS7O14512 581 aa20.04■□□□□ 0.8
CDCA4P4-201ENST00000435216 TMEM94Q12767 1356 aa20.04■□□□□ 0.8
CDCA4P4-201ENST00000435216 RIMS2Q9UQ26 1411 aa20.03■□□□□ 0.8
CDCA4P4-201ENST00000435216 KCNA6P17658 529 aa20.03■□□□□ 0.8
CDCA4P4-201ENST00000435216 PPP1R15AO75807 674 aaPredicted RBP20.02■□□□□ 0.8
CDCA4P4-201ENST00000435216 NUTM2DQ5VT03 806 aaPredicted RBP20.01■□□□□ 0.79
CDCA4P4-201ENST00000435216 PROSER2Q86WR7 435 aaPredicted RBP20.01■□□□□ 0.79
CDCA4P4-201ENST00000435216 NWD1Q149M9 1564 aa20■□□□□ 0.79
CDCA4P4-201ENST00000435216 PLEKHG1Q9ULL1 1385 aa19.99■□□□□ 0.79
CDCA4P4-201ENST00000435216 NKTRP30414 1462 aaKnown RBP19.96■□□□□ 0.79
CDCA4P4-201ENST00000435216 CHD2O14647 1828 aaKnown RBP19.95■□□□□ 0.78
CDCA4P4-201ENST00000435216 HDGFP51858 240 aaKnown RBP19.95■□□□□ 0.78
CDCA4P4-201ENST00000435216 RRBP1Q9P2E9 1410 aaKnown RBP19.94■□□□□ 0.78
CDCA4P4-201ENST00000435216 SPHKAPQ2M3C7 1700 aa19.93■□□□□ 0.78
CDCA4P4-201ENST00000435216 ROBO1Q9Y6N7 1651 aa19.92■□□□□ 0.78
CDCA4P4-201ENST00000435216 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.92■□□□□ 0.78
CDCA4P4-201ENST00000435216 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
CDCA4P4-201ENST00000435216 FAM135BQ49AJ0 1406 aa19.91■□□□□ 0.78
CDCA4P4-201ENST00000435216 ADAMTS13Q76LX8 1427 aa19.91■□□□□ 0.78
CDCA4P4-201ENST00000435216 TBX22Q9Y458 520 aa19.9■□□□□ 0.78
CDCA4P4-201ENST00000435216 MSH6P52701 1360 aa19.89■□□□□ 0.77
CDCA4P4-201ENST00000435216 NAIPQ13075 1403 aa19.88■□□□□ 0.77
CDCA4P4-201ENST00000435216 DIP2AQ14689 1571 aa19.86■□□□□ 0.77
CDCA4P4-201ENST00000435216 ZNF326Q5BKZ1 582 aaKnown RBP19.85■□□□□ 0.77
CDCA4P4-201ENST00000435216 CLTCL1P53675 1640 aa19.84■□□□□ 0.77
CDCA4P4-201ENST00000435216 C14orf37Q86TY3 774 aa19.84■□□□□ 0.77
CDCA4P4-201ENST00000435216 SLAIN2Q9P270 581 aa19.84■□□□□ 0.77
CDCA4P4-201ENST00000435216 TRPM2O94759 1503 aa19.83■□□□□ 0.77
CDCA4P4-201ENST00000435216 NRXN3Q9Y4C0 1643 aa19.83■□□□□ 0.76
CDCA4P4-201ENST00000435216 PTPRUQ92729 1446 aa19.82■□□□□ 0.76
CDCA4P4-201ENST00000435216 TRIM52Q96A61 297 aa19.81■□□□□ 0.76
CDCA4P4-201ENST00000435216 AMOTL2Q9Y2J4 779 aa19.8■□□□□ 0.76
CDCA4P4-201ENST00000435216 PIK3R4Q99570 1358 aa19.8■□□□□ 0.76
CDCA4P4-201ENST00000435216 PHLPP1O60346 1717 aa19.79■□□□□ 0.76
CDCA4P4-201ENST00000435216 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.79■□□□□ 0.76
CDCA4P4-201ENST00000435216 SETBP1Q9Y6X0 1596 aa19.78■□□□□ 0.76
CDCA4P4-201ENST00000435216 HFM1A2PYH4 1435 aa19.78■□□□□ 0.76
CDCA4P4-201ENST00000435216 RGS17Q9UGC6 210 aaPredicted RBP19.78■□□□□ 0.76
CDCA4P4-201ENST00000435216 NEXMIFQ5QGS0 1516 aa19.77■□□□□ 0.76
CDCA4P4-201ENST00000435216 KIF1BO60333 1816 aa19.77■□□□□ 0.76
CDCA4P4-201ENST00000435216 NCOA3Q9Y6Q9 1424 aa19.76■□□□□ 0.75
CDCA4P4-201ENST00000435216 XRN1Q8IZH2 1706 aaKnown RBP19.76■□□□□ 0.75
CDCA4P4-201ENST00000435216 METP08581 1390 aa19.75■□□□□ 0.75
CDCA4P4-201ENST00000435216 C19orf44Q9H6X5 657 aa19.75■□□□□ 0.75
CDCA4P4-201ENST00000435216 ATF3P18847 181 aa19.74■□□□□ 0.75
CDCA4P4-201ENST00000435216 CADPS2Q86UW7 1296 aa19.73■□□□□ 0.75
CDCA4P4-201ENST00000435216 SLC4A1APQ9BWU0 796 aaKnown RBP19.73■□□□□ 0.75
CDCA4P4-201ENST00000435216 COL16A1Q07092 1604 aaPredicted RBP19.73■□□□□ 0.75
CDCA4P4-201ENST00000435216 FOXD1Q16676 465 aa19.71■□□□□ 0.75
CDCA4P4-201ENST00000435216 JCADQ9P266 1359 aa19.69■□□□□ 0.74
CDCA4P4-201ENST00000435216 POTEAQ6S8J7 498 aa19.67■□□□□ 0.74
CDCA4P4-201ENST00000435216 AHDC1Q5TGY3 1603 aaPredicted RBP19.66■□□□□ 0.74
CDCA4P4-201ENST00000435216 BRINP3Q76B58 766 aa19.66■□□□□ 0.74
CDCA4P4-201ENST00000435216 SETD1AO15047 1707 aaKnown RBP19.65■□□□□ 0.74
CDCA4P4-201ENST00000435216 NALCNQ8IZF0 1738 aa19.65■□□□□ 0.74
CDCA4P4-201ENST00000435216 DCCP43146 1447 aa19.64■□□□□ 0.73
CDCA4P4-201ENST00000435216 PPLO60437 1756 aa19.63■□□□□ 0.73
CDCA4P4-201ENST00000435216 MST1RQ04912 1400 aa19.63■□□□□ 0.73
CDCA4P4-201ENST00000435216 VGFO15240 615 aaPredicted RBP19.63■□□□□ 0.73
CDCA4P4-201ENST00000435216 LRP6O75581 1613 aa19.62■□□□□ 0.73
CDCA4P4-201ENST00000435216 ASXL1Q8IXJ9 1541 aa19.62■□□□□ 0.73
CDCA4P4-201ENST00000435216 ADGRL3Q9HAR2 1447 aa19.62■□□□□ 0.73
CDCA4P4-201ENST00000435216 SHPRHQ149N8 1683 aa19.6■□□□□ 0.73
CDCA4P4-201ENST00000435216 RPGRIP1LQ68CZ1 1315 aa19.59■□□□□ 0.73
CDCA4P4-201ENST00000435216 DDX17Q92841 729 aaKnown RBP19.59■□□□□ 0.73
CDCA4P4-201ENST00000435216 ROBO2Q9HCK4 1378 aa19.58■□□□□ 0.73
CDCA4P4-201ENST00000435216 MPHOSPH9Q99550 1183 aa19.58■□□□□ 0.72
CDCA4P4-201ENST00000435216 CCDC144AA2RUR9 1427 aa19.58■□□□□ 0.72
CDCA4P4-201ENST00000435216 NHSL1Q5SYE7 1610 aa19.58■□□□□ 0.72
CDCA4P4-201ENST00000435216 SPATA31A6Q5VVP1 1343 aa19.57■□□□□ 0.72
CDCA4P4-201ENST00000435216 RGL3Q3MIN7 710 aa19.57■□□□□ 0.72
CDCA4P4-201ENST00000435216 MEX3CQ5U5Q3 659 aaKnown RBP19.57■□□□□ 0.72
CDCA4P4-201ENST00000435216 PTCH1Q13635 1447 aa19.56■□□□□ 0.72
CDCA4P4-201ENST00000435216 NUTM2BA6NNL0 878 aaPredicted RBP19.55■□□□□ 0.72
CDCA4P4-201ENST00000435216 NUTM2EB1AL46 878 aaPredicted RBP19.55■□□□□ 0.72
CDCA4P4-201ENST00000435216 NUTM2AQ8IVF1 878 aaPredicted RBP19.55■□□□□ 0.72
CDCA4P4-201ENST00000435216 ADGRF5Q8IZF2 1346 aa19.54■□□□□ 0.72
CDCA4P4-201ENST00000435216 SPATA31E1Q6ZUB1 1445 aa19.53■□□□□ 0.72
CDCA4P4-201ENST00000435216 IFT172Q9UG01 1749 aa19.53■□□□□ 0.72
CDCA4P4-201ENST00000435216 C1orf167Q5SNV9 1468 aa19.52■□□□□ 0.72
CDCA4P4-201ENST00000435216 SETD5Q9C0A6 1442 aa19.51■□□□□ 0.71
CDCA4P4-201ENST00000435216 ORAI2Q96SN7 254 aa19.5■□□□□ 0.71
CDCA4P4-201ENST00000435216 PRAG1Q86YV5 1406 aa19.5■□□□□ 0.71
CDCA4P4-201ENST00000435216 LRRC59Q96AG4 307 aaKnown RBP19.49■□□□□ 0.71
CDCA4P4-201ENST00000435216 STK26Q9P289 416 aa19.49■□□□□ 0.71
CDCA4P4-201ENST00000435216 TMEM132EQ6IEE7 984 aa19.47■□□□□ 0.71
CDCA4P4-201ENST00000435216 PNPLA6Q8IY17 1366 aa19.46■□□□□ 0.71
CDCA4P4-201ENST00000435216 ANKRD30BQ9BXX2 1392 aa19.46■□□□□ 0.71
CDCA4P4-201ENST00000435216 ZNF772Q68DY9 489 aaPredicted RBP19.46■□□□□ 0.71
CDCA4P4-201ENST00000435216 WAPLQ7Z5K2 1190 aa19.45■□□□□ 0.7
CDCA4P4-201ENST00000435216 RAB3GAP2Q9H2M9 1393 aa19.44■□□□□ 0.7
CDCA4P4-201ENST00000435216 LAMC1P11047 1609 aa19.43■□□□□ 0.7
CDCA4P4-201ENST00000435216 PIK3C2GO75747 1445 aa19.43■□□□□ 0.7
CDCA4P4-201ENST00000435216 CDC42BPGQ6DT37 1551 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms