RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 NEUROD1Q13562 356 aa6.41□□□□□ -1.38
UBE4A-202ENST00000431736 ERBINQ96RT1 1412 aa6.41□□□□□ -1.38
UBE4A-202ENST00000431736 PLA2R1Q13018 1463 aa6.41□□□□□ -1.38
UBE4A-202ENST00000431736 TMC1Q8TDI8 760 aa6.41□□□□□ -1.38
UBE4A-202ENST00000431736 FGD6Q6ZV73 1430 aa6.41□□□□□ -1.38
UBE4A-202ENST00000431736 TMEM2Q9UHN6 1383 aa6.4□□□□□ -1.38
UBE4A-202ENST00000431736 NPHP1O15259 732 aa6.4□□□□□ -1.38
UBE4A-202ENST00000431736 IQSEC2Q5JU85 1478 aa6.4□□□□□ -1.39
UBE4A-202ENST00000431736 PZPP20742 1482 aa6.4□□□□□ -1.39
UBE4A-202ENST00000431736 PREX1Q8TCU6 1659 aa6.39□□□□□ -1.39
UBE4A-202ENST00000431736 C11orf95C9JLR9 678 aaPredicted RBP6.39□□□□□ -1.39
UBE4A-202ENST00000431736 HDGFL2Q7Z4V5 671 aaPredicted RBP6.39□□□□□ -1.39
UBE4A-202ENST00000431736 PELP1Q8IZL8 1130 aaKnown RBP6.39□□□□□ -1.39
UBE4A-202ENST00000431736 STRN4Q9NRL3 753 aa6.39□□□□□ -1.39
UBE4A-202ENST00000431736 SAMD9LQ8IVG5 1584 aa6.39□□□□□ -1.39
UBE4A-202ENST00000431736 SPATA31D1Q6ZQQ2 1576 aa6.39□□□□□ -1.39
UBE4A-202ENST00000431736 STAC3Q96MF2 364 aa6.38□□□□□ -1.39
UBE4A-202ENST00000431736 CDCA8Q53HL2 280 aa6.38□□□□□ -1.39
UBE4A-202ENST00000431736 ARHGEF12Q9NZN5 1544 aa6.38□□□□□ -1.39
UBE4A-202ENST00000431736 ATAD2Q6PL18 1390 aa6.38□□□□□ -1.39
UBE4A-202ENST00000431736 SOX12O15370 315 aa6.38□□□□□ -1.39
UBE4A-202ENST00000431736 DAPK1P53355 1430 aa6.38□□□□□ -1.39
UBE4A-202ENST00000431736 CEP170BQ9Y4F5 1589 aaPredicted RBP6.37□□□□□ -1.39
UBE4A-202ENST00000431736 AFF2P51816 1311 aa6.37□□□□□ -1.39
UBE4A-202ENST00000431736 RRBP1Q9P2E9 1410 aaKnown RBP6.37□□□□□ -1.39
UBE4A-202ENST00000431736 PREX2Q70Z35 1606 aa6.37□□□□□ -1.39
UBE4A-202ENST00000431736 DCAF11Q8TEB1 546 aa6.37□□□□□ -1.39
UBE4A-202ENST00000431736 CCDC125Q86Z20 511 aa6.37□□□□□ -1.39
UBE4A-202ENST00000431736 KRT28Q7Z3Y7 464 aa6.37□□□□□ -1.39
UBE4A-202ENST00000431736 USP35Q9P2H5 1018 aa6.36□□□□□ -1.39
UBE4A-202ENST00000431736 PHF8Q9UPP1 1060 aa6.36□□□□□ -1.39
UBE4A-202ENST00000431736 DIP2CQ9Y2E4 1556 aa6.36□□□□□ -1.39
UBE4A-202ENST00000431736 FOXO3O43524 673 aa6.36□□□□□ -1.39
UBE4A-202ENST00000431736 BCL11BQ9C0K0 894 aaPredicted RBP6.36□□□□□ -1.39
UBE4A-202ENST00000431736 EFCAB6Q5THR3 1501 aa6.35□□□□□ -1.39
UBE4A-202ENST00000431736 XPCQ01831 940 aaPredicted RBP6.35□□□□□ -1.39
UBE4A-202ENST00000431736 NLRP13Q86W25 1043 aa6.35□□□□□ -1.39
UBE4A-202ENST00000431736 TIAM1Q13009 1591 aa6.35□□□□□ -1.39
UBE4A-202ENST00000431736 MINK1Q8N4C8 1332 aaPredicted RBP6.35□□□□□ -1.39
UBE4A-202ENST00000431736 TRAK1Q9UPV9 953 aa6.35□□□□□ -1.39
UBE4A-202ENST00000431736 ANKRD30BQ9BXX2 1392 aa6.35□□□□□ -1.39
UBE4A-202ENST00000431736 ADAMTSL3P82987 1691 aa6.35□□□□□ -1.39
UBE4A-202ENST00000431736 TONSLQ96HA7 1378 aa6.35□□□□□ -1.39
UBE4A-202ENST00000431736 PIK3R4Q99570 1358 aa6.35□□□□□ -1.39
UBE4A-202ENST00000431736 ADGBQ8N7X0 1667 aa6.34□□□□□ -1.39
UBE4A-202ENST00000431736 LTKP29376 864 aa6.34□□□□□ -1.39
UBE4A-202ENST00000431736 PCGF6Q9BYE7 350 aa6.34□□□□□ -1.39
UBE4A-202ENST00000431736 ERVK-7P63135 1459 aa6.34□□□□□ -1.39
UBE4A-202ENST00000431736 PLEKHG1Q9ULL1 1385 aa6.34□□□□□ -1.39
UBE4A-202ENST00000431736 POLD1P28340 1107 aa6.34□□□□□ -1.39
UBE4A-202ENST00000431736 TOM1L2Q6ZVM7 507 aa6.34□□□□□ -1.4
UBE4A-202ENST00000431736 ABTB2Q8N961 1025 aa6.33□□□□□ -1.4
UBE4A-202ENST00000431736 TERF2IPQ9NYB0 399 aa6.33□□□□□ -1.4
UBE4A-202ENST00000431736 CLTCQ00610 1675 aaKnown RBP6.33□□□□□ -1.4
UBE4A-202ENST00000431736 CCER1Q8TC90 406 aaPredicted RBP6.33□□□□□ -1.4
UBE4A-202ENST00000431736 MPHOSPH9Q99550 1183 aa6.33□□□□□ -1.4
UBE4A-202ENST00000431736 TMX4Q9H1E5 349 aaPredicted RBP6.33□□□□□ -1.4
UBE4A-202ENST00000431736 PMFBP1Q8TBY8 1022 aa6.32□□□□□ -1.4
UBE4A-202ENST00000431736 STK32BQ9NY57 414 aa6.32□□□□□ -1.4
UBE4A-202ENST00000431736 SETD5Q9C0A6 1442 aa6.32□□□□□ -1.4
UBE4A-202ENST00000431736 SYTL4Q96C24 671 aaPredicted RBP6.32□□□□□ -1.4
UBE4A-202ENST00000431736 HFM1A2PYH4 1435 aa6.32□□□□□ -1.4
UBE4A-202ENST00000431736 ARHGEF10O15013 1369 aa6.32□□□□□ -1.4
UBE4A-202ENST00000431736 KDM5CP41229 1560 aa6.32□□□□□ -1.4
UBE4A-202ENST00000431736 AMPHP49418 695 aa6.32□□□□□ -1.4
UBE4A-202ENST00000431736 ABCC5O15440 1437 aa6.31□□□□□ -1.4
UBE4A-202ENST00000431736 ARXQ96QS3 562 aa6.31□□□□□ -1.4
UBE4A-202ENST00000431736 WASHC2AQ641Q2 1341 aa6.31□□□□□ -1.4
UBE4A-202ENST00000431736 EVC2Q86UK5 1308 aa6.31□□□□□ -1.4
UBE4A-202ENST00000431736 PPRC1Q5VV67 1664 aaKnown RBP6.31□□□□□ -1.4
UBE4A-202ENST00000431736 KRT27Q7Z3Y8 459 aa6.31□□□□□ -1.4
UBE4A-202ENST00000431736 HIRIP3Q9BW71 556 aaPredicted RBP6.3□□□□□ -1.4
UBE4A-202ENST00000431736 ROCK1Q13464 1354 aa6.3□□□□□ -1.4
UBE4A-202ENST00000431736 REREQ9P2R6 1566 aa6.3□□□□□ -1.4
UBE4A-202ENST00000431736 NLRP6P59044 892 aa6.3□□□□□ -1.4
UBE4A-202ENST00000431736 NLRP2Q9NX02 1062 aa6.3□□□□□ -1.4
UBE4A-202ENST00000431736 RICTORQ6R327 1708 aa6.3□□□□□ -1.4
UBE4A-202ENST00000431736 PRAM1Q96QH2 718 aa6.3□□□□□ -1.4
UBE4A-202ENST00000431736 FAM135BQ49AJ0 1406 aa6.3□□□□□ -1.4
UBE4A-202ENST00000431736 ARHGEF5Q12774 1597 aa6.3□□□□□ -1.4
UBE4A-202ENST00000431736 ABCA6Q8N139 1617 aa6.3□□□□□ -1.4
UBE4A-202ENST00000431736 MAP3K1Q13233 1512 aa6.3□□□□□ -1.4
UBE4A-202ENST00000431736 PTPN23Q9H3S7 1636 aa6.3□□□□□ -1.4
UBE4A-202ENST00000431736 PPM1GO15355 546 aaPredicted RBP6.29□□□□□ -1.4
UBE4A-202ENST00000431736 APBA3O96018 575 aa6.29□□□□□ -1.4
UBE4A-202ENST00000431736 C16orf71Q8IYS4 520 aaPredicted RBP6.29□□□□□ -1.4
UBE4A-202ENST00000431736 TMEM132EQ6IEE7 984 aa6.29□□□□□ -1.4
UBE4A-202ENST00000431736 UNC5CLQ8IV45 518 aa6.29□□□□□ -1.4
UBE4A-202ENST00000431736 CARD11Q9BXL7 1154 aa6.29□□□□□ -1.4
UBE4A-202ENST00000431736 ILDR2Q71H61 639 aa6.28□□□□□ -1.4
UBE4A-202ENST00000431736 CDCA7Q9BWT1 371 aaPredicted RBP6.28□□□□□ -1.4
UBE4A-202ENST00000431736 TRPM2O94759 1503 aa6.28□□□□□ -1.4
UBE4A-202ENST00000431736 FAM196AQ6ZSG2 479 aa6.28□□□□□ -1.4
UBE4A-202ENST00000431736 KCNH5Q8NCM2 988 aa6.28□□□□□ -1.4
UBE4A-202ENST00000431736 NUTM2GQ5VZR2 741 aa6.28□□□□□ -1.4
UBE4A-202ENST00000431736 NCOA3Q9Y6Q9 1424 aa6.28□□□□□ -1.4
UBE4A-202ENST00000431736 NKTRP30414 1462 aaKnown RBP6.28□□□□□ -1.4
UBE4A-202ENST00000431736 ZC3H6P61129 1189 aaKnown RBP6.28□□□□□ -1.4
UBE4A-202ENST00000431736 BRINP3Q76B58 766 aa6.28□□□□□ -1.4
UBE4A-202ENST00000431736 RAPGEF4Q8WZA2 1011 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms