RNA–Protein interactions for RNA: ENST00000431678.5

PBRM1-213, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-213ENST00000431678 E9PCH4 1651 aa36.39■■■■□ 3.42
PBRM1-213ENST00000431678 NWD1Q149M9 1564 aa36.37■■■■□ 3.41
PBRM1-213ENST00000431678 ZFYVE9O95405 1425 aa36.37■■■■□ 3.41
PBRM1-213ENST00000431678 PHF23Q9BUL5 403 aaPredicted RBP36.34■■■■□ 3.41
PBRM1-213ENST00000431678 PROSER2Q86WR7 435 aaPredicted RBP36.33■■■■□ 3.41
PBRM1-213ENST00000431678 CHD2O14647 1828 aaKnown RBP36.32■■■■□ 3.41
PBRM1-213ENST00000431678 BCANQ96GW7 911 aa36.32■■■■□ 3.4
PBRM1-213ENST00000431678 RIMS2Q9UQ26 1411 aa36.31■■■■□ 3.4
PBRM1-213ENST00000431678 ROBO1Q9Y6N7 1651 aa36.3■■■■□ 3.4
PBRM1-213ENST00000431678 IQGAP3Q86VI3 1631 aa36.3■■■■□ 3.4
PBRM1-213ENST00000431678 FAM135BQ49AJ0 1406 aa36.29■■■■□ 3.4
PBRM1-213ENST00000431678 PPARGC1BQ86YN6 1023 aaKnown RBP36.29■■■■□ 3.4
PBRM1-213ENST00000431678 NKTRP30414 1462 aaKnown RBP36.28■■■■□ 3.4
PBRM1-213ENST00000431678 ROCK1Q13464 1354 aa36.27■■■■□ 3.4
PBRM1-213ENST00000431678 PLEKHG1Q9ULL1 1385 aa36.27■■■■□ 3.4
PBRM1-213ENST00000431678 ITGAEP38570 1179 aa36.24■■■■□ 3.39
PBRM1-213ENST00000431678 CHGAP10645 457 aaKnown RBP36.23■■■■□ 3.39
PBRM1-213ENST00000431678 NUTM2DQ5VT03 806 aaPredicted RBP36.22■■■■□ 3.39
PBRM1-213ENST00000431678 PPP1R15AO75807 674 aaPredicted RBP36.21■■■■□ 3.39
PBRM1-213ENST00000431678 RGS17Q9UGC6 210 aaPredicted RBP36.21■■■■□ 3.39
PBRM1-213ENST00000431678 NUP155O75694 1391 aa36.16■■■■□ 3.38
PBRM1-213ENST00000431678 ADAMTS13Q76LX8 1427 aa36.15■■■■□ 3.38
PBRM1-213ENST00000431678 MSH6P52701 1360 aa36.14■■■■□ 3.38
PBRM1-213ENST00000431678 HDGFP51858 240 aaKnown RBP36.13■■■■□ 3.37
PBRM1-213ENST00000431678 TBX22Q9Y458 520 aa36.12■■■■□ 3.37
PBRM1-213ENST00000431678 PHLPP1O60346 1717 aa36.08■■■■□ 3.37
PBRM1-213ENST00000431678 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.08■■■■□ 3.37
PBRM1-213ENST00000431678 SLAIN2Q9P270 581 aa36.07■■■■□ 3.36
PBRM1-213ENST00000431678 SPHKAPQ2M3C7 1700 aa36.06■■■■□ 3.36
PBRM1-213ENST00000431678 DIP2AQ14689 1571 aa36.04■■■■□ 3.36
PBRM1-213ENST00000431678 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.03■■■■□ 3.36
PBRM1-213ENST00000431678 NRXN3Q9Y4C0 1643 aa36■■■■□ 3.35
PBRM1-213ENST00000431678 PTPRUQ92729 1446 aa35.99■■■■□ 3.35
PBRM1-213ENST00000431678 COL16A1Q07092 1604 aaPredicted RBP35.97■■■■□ 3.35
PBRM1-213ENST00000431678 POTEAQ6S8J7 498 aa35.96■■■■□ 3.35
PBRM1-213ENST00000431678 TRPM2O94759 1503 aa35.96■■■■□ 3.35
PBRM1-213ENST00000431678 NCOA3Q9Y6Q9 1424 aa35.95■■■■□ 3.35
PBRM1-213ENST00000431678 C14orf37Q86TY3 774 aa35.95■■■■□ 3.35
PBRM1-213ENST00000431678 PIK3R4Q99570 1358 aa35.94■■■■□ 3.34
PBRM1-213ENST00000431678 AMOTL2Q9Y2J4 779 aa35.92■■■■□ 3.34
PBRM1-213ENST00000431678 CLTCL1P53675 1640 aa35.9■■■■□ 3.34
PBRM1-213ENST00000431678 XRN1Q8IZH2 1706 aaKnown RBP35.88■■■■□ 3.34
PBRM1-213ENST00000431678 SETBP1Q9Y6X0 1596 aa35.88■■■■□ 3.33
PBRM1-213ENST00000431678 JCADQ9P266 1359 aa35.88■■■■□ 3.33
PBRM1-213ENST00000431678 C19orf44Q9H6X5 657 aa35.87■■■■□ 3.33
PBRM1-213ENST00000431678 RRBP1Q9P2E9 1410 aaKnown RBP35.87■■■■□ 3.33
PBRM1-213ENST00000431678 ZNF326Q5BKZ1 582 aaKnown RBP35.84■■■■□ 3.33
PBRM1-213ENST00000431678 CADPS2Q86UW7 1296 aa35.83■■■■□ 3.33
PBRM1-213ENST00000431678 NAIPQ13075 1403 aa35.83■■■■□ 3.33
PBRM1-213ENST00000431678 ATF3P18847 181 aa35.82■■■■□ 3.32
PBRM1-213ENST00000431678 AHDC1Q5TGY3 1603 aaPredicted RBP35.82■■■■□ 3.32
PBRM1-213ENST00000431678 NEXMIFQ5QGS0 1516 aa35.81■■■■□ 3.32
PBRM1-213ENST00000431678 KIF1BO60333 1816 aa35.8■■■■□ 3.32
PBRM1-213ENST00000431678 LRP6O75581 1613 aa35.8■■■■□ 3.32
PBRM1-213ENST00000431678 METP08581 1390 aa35.8■■■■□ 3.32
PBRM1-213ENST00000431678 SETD1AO15047 1707 aaKnown RBP35.77■■■■□ 3.32
PBRM1-213ENST00000431678 SHPRHQ149N8 1683 aa35.75■■■■□ 3.31
PBRM1-213ENST00000431678 BRINP3Q76B58 766 aa35.74■■■■□ 3.31
PBRM1-213ENST00000431678 NALCNQ8IZF0 1738 aa35.69■■■■□ 3.3
PBRM1-213ENST00000431678 DCCP43146 1447 aa35.68■■■■□ 3.3
PBRM1-213ENST00000431678 MST1RQ04912 1400 aa35.68■■■■□ 3.3
PBRM1-213ENST00000431678 ASXL1Q8IXJ9 1541 aa35.67■■■■□ 3.3
PBRM1-213ENST00000431678 SPATA31A6Q5VVP1 1343 aa35.66■■■■□ 3.3
PBRM1-213ENST00000431678 NHSL1Q5SYE7 1610 aa35.65■■■■□ 3.3
PBRM1-213ENST00000431678 TRIM52Q96A61 297 aa35.64■■■■□ 3.3
PBRM1-213ENST00000431678 HFM1A2PYH4 1435 aa35.61■■■■□ 3.29
PBRM1-213ENST00000431678 ADGRL3Q9HAR2 1447 aa35.6■■■■□ 3.29
PBRM1-213ENST00000431678 MEX3CQ5U5Q3 659 aaKnown RBP35.6■■■■□ 3.29
PBRM1-213ENST00000431678 DDX17Q92841 729 aaKnown RBP35.58■■■■□ 3.29
PBRM1-213ENST00000431678 PPLO60437 1756 aa35.56■■■■□ 3.28
PBRM1-213ENST00000431678 NUTM2BA6NNL0 878 aaPredicted RBP35.55■■■■□ 3.28
PBRM1-213ENST00000431678 NUTM2EB1AL46 878 aaPredicted RBP35.55■■■■□ 3.28
PBRM1-213ENST00000431678 NUTM2AQ8IVF1 878 aaPredicted RBP35.55■■■■□ 3.28
PBRM1-213ENST00000431678 SLC4A1APQ9BWU0 796 aaKnown RBP35.54■■■■□ 3.28
PBRM1-213ENST00000431678 SETD5Q9C0A6 1442 aa35.53■■■■□ 3.28
PBRM1-213ENST00000431678 FOXD1Q16676 465 aa35.51■■■■□ 3.28
PBRM1-213ENST00000431678 ROBO2Q9HCK4 1378 aa35.51■■■■□ 3.27
PBRM1-213ENST00000431678 VGFO15240 615 aaPredicted RBP35.48■■■■□ 3.27
PBRM1-213ENST00000431678 ZNF772Q68DY9 489 aaPredicted RBP35.48■■■■□ 3.27
PBRM1-213ENST00000431678 PTCH1Q13635 1447 aa35.47■■■■□ 3.27
PBRM1-213ENST00000431678 C1orf167Q5SNV9 1468 aa35.45■■■■□ 3.27
PBRM1-213ENST00000431678 RPGRIP1LQ68CZ1 1315 aa35.42■■■■□ 3.26
PBRM1-213ENST00000431678 LRRC59Q96AG4 307 aaKnown RBP35.42■■■■□ 3.26
PBRM1-213ENST00000431678 PNPLA6Q8IY17 1366 aa35.41■■■■□ 3.26
PBRM1-213ENST00000431678 LAMC1P11047 1609 aa35.39■■■■□ 3.26
PBRM1-213ENST00000431678 ORAI2Q96SN7 254 aa35.39■■■■□ 3.26
PBRM1-213ENST00000431678 AFF2P51816 1311 aa35.38■■■■□ 3.25
PBRM1-213ENST00000431678 PRAG1Q86YV5 1406 aa35.38■■■■□ 3.25
PBRM1-213ENST00000431678 IFT172Q9UG01 1749 aa35.35■■■■□ 3.25
PBRM1-213ENST00000431678 RXRBP28702 533 aa35.34■■■■□ 3.25
PBRM1-213ENST00000431678 ADGRF5Q8IZF2 1346 aa35.33■■■■□ 3.25
PBRM1-213ENST00000431678 C8orf37Q96NL8 207 aa35.32■■■■□ 3.24
PBRM1-213ENST00000431678 RGL3Q3MIN7 710 aa35.3■■■■□ 3.24
PBRM1-213ENST00000431678 UPF1Q92900 1129 aaKnown RBP eCLIP35.3■■■■□ 3.24
PBRM1-213ENST00000431678 SPATA31E1Q6ZUB1 1445 aa35.29■■■■□ 3.24
PBRM1-213ENST00000431678 CCDC144AA2RUR9 1427 aa35.28■■■■□ 3.24
PBRM1-213ENST00000431678 SOS2Q07890 1332 aaPredicted RBP35.28■■■■□ 3.24
PBRM1-213ENST00000431678 MPHOSPH9Q99550 1183 aa35.27■■■■□ 3.24
PBRM1-213ENST00000431678 ADAMTS2O95450 1211 aa35.25■■■■□ 3.23
PBRM1-213ENST00000431678 CDK12Q9NYV4 1490 aaPredicted RBP35.24■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms