RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 XIRP1Q702N8 1843 aaKnown RBP23.45■■□□□ 1.34
RPL28-204ENST00000431533 TET3O43151 1660 aa23.43■■□□□ 1.34
RPL28-204ENST00000431533 NKTRP30414 1462 aaKnown RBP23.43■■□□□ 1.34
RPL28-204ENST00000431533 PPP1R15AO75807 674 aaPredicted RBP23.42■■□□□ 1.34
RPL28-204ENST00000431533 MSH6P52701 1360 aa23.4■■□□□ 1.34
RPL28-204ENST00000431533 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.38■■□□□ 1.33
RPL28-204ENST00000431533 PLEKHG1Q9ULL1 1385 aa23.37■■□□□ 1.33
RPL28-204ENST00000431533 NWD1Q149M9 1564 aa23.36■■□□□ 1.33
RPL28-204ENST00000431533 ROCK1Q13464 1354 aa23.34■■□□□ 1.33
RPL28-204ENST00000431533 RIMS2Q9UQ26 1411 aa23.33■■□□□ 1.33
RPL28-204ENST00000431533 ROBO1Q9Y6N7 1651 aa23.33■■□□□ 1.33
RPL28-204ENST00000431533 SLAIN2Q9P270 581 aa23.33■■□□□ 1.33
RPL28-204ENST00000431533 RRBP1Q9P2E9 1410 aaKnown RBP23.33■■□□□ 1.32
RPL28-204ENST00000431533 CHGAP10645 457 aaKnown RBP23.32■■□□□ 1.32
RPL28-204ENST00000431533 RBM33Q96EV2 1170 aaKnown RBP23.32■■□□□ 1.32
RPL28-204ENST00000431533 TBX22Q9Y458 520 aa23.32■■□□□ 1.32
RPL28-204ENST00000431533 ZFYVE9O95405 1425 aa23.32■■□□□ 1.32
RPL28-204ENST00000431533 RGS17Q9UGC6 210 aaPredicted RBP23.31■■□□□ 1.32
RPL28-204ENST00000431533 GCC2Q8IWJ2 1684 aa23.31■■□□□ 1.32
RPL28-204ENST00000431533 UNC13BO14795 1591 aa23.31■■□□□ 1.32
RPL28-204ENST00000431533 NCOA3Q9Y6Q9 1424 aa23.3■■□□□ 1.32
RPL28-204ENST00000431533 C14orf37Q86TY3 774 aa23.29■■□□□ 1.32
RPL28-204ENST00000431533 TMEM131LA2VDJ0 1609 aa23.28■■□□□ 1.32
RPL28-204ENST00000431533 CHD2O14647 1828 aaKnown RBP23.27■■□□□ 1.32
RPL28-204ENST00000431533 JCADQ9P266 1359 aa23.26■■□□□ 1.31
RPL28-204ENST00000431533 MYO5BQ9ULV0 1848 aa23.25■■□□□ 1.31
RPL28-204ENST00000431533 PIK3R4Q99570 1358 aa23.25■■□□□ 1.31
RPL28-204ENST00000431533 CADPS2Q86UW7 1296 aa23.23■■□□□ 1.31
RPL28-204ENST00000431533 DIP2AQ14689 1571 aa23.23■■□□□ 1.31
RPL28-204ENST00000431533 ATF3P18847 181 aa23.22■■□□□ 1.31
RPL28-204ENST00000431533 PHLPP1O60346 1717 aa23.22■■□□□ 1.31
RPL28-204ENST00000431533 C19orf44Q9H6X5 657 aa23.21■■□□□ 1.31
RPL28-204ENST00000431533 NUP155O75694 1391 aa23.21■■□□□ 1.31
RPL28-204ENST00000431533 IQGAP3Q86VI3 1631 aa23.21■■□□□ 1.31
RPL28-204ENST00000431533 POTEAQ6S8J7 498 aa23.2■■□□□ 1.3
RPL28-204ENST00000431533 E9PCH4 1651 aa23.19■■□□□ 1.3
RPL28-204ENST00000431533 NUTM2DQ5VT03 806 aaPredicted RBP23.18■■□□□ 1.3
RPL28-204ENST00000431533 ADAMTS13Q76LX8 1427 aa23.16■■□□□ 1.3
RPL28-204ENST00000431533 SPATA31A6Q5VVP1 1343 aa23.16■■□□□ 1.3
RPL28-204ENST00000431533 TRPM2O94759 1503 aa23.15■■□□□ 1.3
RPL28-204ENST00000431533 AMOTL2Q9Y2J4 779 aa23.14■■□□□ 1.29
RPL28-204ENST00000431533 NAIPQ13075 1403 aa23.14■■□□□ 1.29
RPL28-204ENST00000431533 MEX3CQ5U5Q3 659 aaKnown RBP23.13■■□□□ 1.29
RPL28-204ENST00000431533 ZNF772Q68DY9 489 aaPredicted RBP23.11■■□□□ 1.29
RPL28-204ENST00000431533 ZNF326Q5BKZ1 582 aaKnown RBP23.1■■□□□ 1.29
RPL28-204ENST00000431533 COL16A1Q07092 1604 aaPredicted RBP23.1■■□□□ 1.29
RPL28-204ENST00000431533 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.1■■□□□ 1.29
RPL28-204ENST00000431533 DCCP43146 1447 aa23.08■■□□□ 1.28
RPL28-204ENST00000431533 AHDC1Q5TGY3 1603 aaPredicted RBP23.07■■□□□ 1.28
RPL28-204ENST00000431533 HFM1A2PYH4 1435 aa23.06■■□□□ 1.28
RPL28-204ENST00000431533 TRIM52Q96A61 297 aa23.05■■□□□ 1.28
RPL28-204ENST00000431533 SPHKAPQ2M3C7 1700 aa23.04■■□□□ 1.28
RPL28-204ENST00000431533 BRINP3Q76B58 766 aa23.03■■□□□ 1.28
RPL28-204ENST00000431533 SETBP1Q9Y6X0 1596 aa23.01■■□□□ 1.27
RPL28-204ENST00000431533 PTPRUQ92729 1446 aa23.01■■□□□ 1.27
RPL28-204ENST00000431533 SHPRHQ149N8 1683 aa23.01■■□□□ 1.27
RPL28-204ENST00000431533 LRP6O75581 1613 aa22.98■■□□□ 1.27
RPL28-204ENST00000431533 LRRC59Q96AG4 307 aaKnown RBP22.98■■□□□ 1.27
RPL28-204ENST00000431533 XRN1Q8IZH2 1706 aaKnown RBP22.97■■□□□ 1.27
RPL28-204ENST00000431533 RXRBP28702 533 aa22.96■■□□□ 1.27
RPL28-204ENST00000431533 NUTM2BA6NNL0 878 aaPredicted RBP22.95■■□□□ 1.26
RPL28-204ENST00000431533 NUTM2EB1AL46 878 aaPredicted RBP22.95■■□□□ 1.26
RPL28-204ENST00000431533 NUTM2AQ8IVF1 878 aaPredicted RBP22.95■■□□□ 1.26
RPL28-204ENST00000431533 NRXN3Q9Y4C0 1643 aa22.95■■□□□ 1.26
RPL28-204ENST00000431533 ASXL1Q8IXJ9 1541 aa22.94■■□□□ 1.26
RPL28-204ENST00000431533 MST1RQ04912 1400 aa22.94■■□□□ 1.26
RPL28-204ENST00000431533 SETD5Q9C0A6 1442 aa22.94■■□□□ 1.26
RPL28-204ENST00000431533 METP08581 1390 aa22.93■■□□□ 1.26
RPL28-204ENST00000431533 VGFO15240 615 aaPredicted RBP22.93■■□□□ 1.26
RPL28-204ENST00000431533 ADGRL3Q9HAR2 1447 aa22.92■■□□□ 1.26
RPL28-204ENST00000431533 SETD1AO15047 1707 aaKnown RBP22.92■■□□□ 1.26
RPL28-204ENST00000431533 SLC4A1APQ9BWU0 796 aaKnown RBP22.92■■□□□ 1.26
RPL28-204ENST00000431533 CLTCL1P53675 1640 aa22.92■■□□□ 1.26
RPL28-204ENST00000431533 KIF1BO60333 1816 aa22.91■■□□□ 1.26
RPL28-204ENST00000431533 NEXMIFQ5QGS0 1516 aa22.88■■□□□ 1.25
RPL28-204ENST00000431533 RPGRIP1LQ68CZ1 1315 aa22.88■■□□□ 1.25
RPL28-204ENST00000431533 NHSL1Q5SYE7 1610 aa22.88■■□□□ 1.25
RPL28-204ENST00000431533 AFF2P51816 1311 aa22.87■■□□□ 1.25
RPL28-204ENST00000431533 CDK12Q9NYV4 1490 aaPredicted RBP22.87■■□□□ 1.25
RPL28-204ENST00000431533 UPF1Q92900 1129 aaKnown RBP eCLIP22.87■■□□□ 1.25
RPL28-204ENST00000431533 FOXD1Q16676 465 aa22.84■■□□□ 1.25
RPL28-204ENST00000431533 PTCH1Q13635 1447 aa22.83■■□□□ 1.25
RPL28-204ENST00000431533 C8orf37Q96NL8 207 aa22.83■■□□□ 1.25
RPL28-204ENST00000431533 PNPLA6Q8IY17 1366 aa22.81■■□□□ 1.24
RPL28-204ENST00000431533 RBM6P78332 1123 aaKnown RBP22.81■■□□□ 1.24
RPL28-204ENST00000431533 QTRT2Q9H974 415 aaKnown RBP22.81■■□□□ 1.24
RPL28-204ENST00000431533 C1orf167Q5SNV9 1468 aa22.8■■□□□ 1.24
RPL28-204ENST00000431533 NALCNQ8IZF0 1738 aa22.8■■□□□ 1.24
RPL28-204ENST00000431533 NGLY1Q96IV0 654 aa22.79■■□□□ 1.24
RPL28-204ENST00000431533 MPHOSPH9Q99550 1183 aa22.78■■□□□ 1.24
RPL28-204ENST00000431533 DDX17Q92841 729 aaKnown RBP22.77■■□□□ 1.24
RPL28-204ENST00000431533 RAB3GAP2Q9H2M9 1393 aa22.76■■□□□ 1.23
RPL28-204ENST00000431533 SOS2Q07890 1332 aaPredicted RBP22.76■■□□□ 1.23
RPL28-204ENST00000431533 PRAG1Q86YV5 1406 aa22.75■■□□□ 1.23
RPL28-204ENST00000431533 ROBO2Q9HCK4 1378 aa22.75■■□□□ 1.23
RPL28-204ENST00000431533 ADAMTS2O95450 1211 aa22.74■■□□□ 1.23
RPL28-204ENST00000431533 ORAI2Q96SN7 254 aa22.73■■□□□ 1.23
RPL28-204ENST00000431533 LAMC1P11047 1609 aa22.72■■□□□ 1.23
RPL28-204ENST00000431533 CCDC144AA2RUR9 1427 aa22.71■■□□□ 1.23
RPL28-204ENST00000431533 USP21Q9UK80 565 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms