RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 FAM50AQ14320 339 aaKnown RBP28.48■■■□□ 2.15
UPK3BP1-201ENST00000428678 NWD1Q149M9 1564 aa28.48■■■□□ 2.15
UPK3BP1-201ENST00000428678 RPRD2Q5VT52 1461 aaKnown RBP28.45■■■□□ 2.14
UPK3BP1-201ENST00000428678 ANKRD50Q9ULJ7 1429 aa28.44■■■□□ 2.14
UPK3BP1-201ENST00000428678 MSH6P52701 1360 aa28.44■■■□□ 2.14
UPK3BP1-201ENST00000428678 MYO5BQ9ULV0 1848 aa28.43■■■□□ 2.14
UPK3BP1-201ENST00000428678 PPP1R15AO75807 674 aaPredicted RBP28.42■■■□□ 2.14
UPK3BP1-201ENST00000428678 GCC2Q8IWJ2 1684 aa28.41■■■□□ 2.14
UPK3BP1-201ENST00000428678 ZFYVE9O95405 1425 aa28.4■■■□□ 2.14
UPK3BP1-201ENST00000428678 PLEKHG1Q9ULL1 1385 aa28.39■■■□□ 2.14
UPK3BP1-201ENST00000428678 RIMS2Q9UQ26 1411 aa28.39■■■□□ 2.14
UPK3BP1-201ENST00000428678 POTEAQ6S8J7 498 aa28.38■■■□□ 2.13
UPK3BP1-201ENST00000428678 CHD2O14647 1828 aaKnown RBP28.37■■■□□ 2.13
UPK3BP1-201ENST00000428678 SLAIN2Q9P270 581 aa28.37■■■□□ 2.13
UPK3BP1-201ENST00000428678 HDGFP51858 240 aaKnown RBP28.36■■■□□ 2.13
UPK3BP1-201ENST00000428678 TMEM131LA2VDJ0 1609 aa28.36■■■□□ 2.13
UPK3BP1-201ENST00000428678 PHLPP1O60346 1717 aa28.35■■■□□ 2.13
UPK3BP1-201ENST00000428678 CHGAP10645 457 aaKnown RBP28.34■■■□□ 2.13
UPK3BP1-201ENST00000428678 UNC13BO14795 1591 aa28.31■■■□□ 2.12
UPK3BP1-201ENST00000428678 JCADQ9P266 1359 aa28.29■■■□□ 2.12
UPK3BP1-201ENST00000428678 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.29■■■□□ 2.12
UPK3BP1-201ENST00000428678 TBX22Q9Y458 520 aa28.29■■■□□ 2.12
UPK3BP1-201ENST00000428678 C14orf37Q86TY3 774 aa28.28■■■□□ 2.12
UPK3BP1-201ENST00000428678 NUTM2DQ5VT03 806 aaPredicted RBP28.27■■■□□ 2.12
UPK3BP1-201ENST00000428678 E9PCH4 1651 aa28.26■■■□□ 2.12
UPK3BP1-201ENST00000428678 COL16A1Q07092 1604 aaPredicted RBP28.23■■■□□ 2.11
UPK3BP1-201ENST00000428678 ADAMTS13Q76LX8 1427 aa28.23■■■□□ 2.11
UPK3BP1-201ENST00000428678 NCOA3Q9Y6Q9 1424 aa28.23■■■□□ 2.11
UPK3BP1-201ENST00000428678 DIP2AQ14689 1571 aa28.22■■■□□ 2.11
UPK3BP1-201ENST00000428678 IQGAP3Q86VI3 1631 aa28.2■■■□□ 2.1
UPK3BP1-201ENST00000428678 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.19■■■□□ 2.1
UPK3BP1-201ENST00000428678 SETD1AO15047 1707 aaKnown RBP28.18■■■□□ 2.1
UPK3BP1-201ENST00000428678 ATF3P18847 181 aa28.18■■■□□ 2.1
UPK3BP1-201ENST00000428678 CADPS2Q86UW7 1296 aa28.18■■■□□ 2.1
UPK3BP1-201ENST00000428678 ROCK1Q13464 1354 aa28.18■■■□□ 2.1
UPK3BP1-201ENST00000428678 PIK3R4Q99570 1358 aa28.17■■■□□ 2.1
UPK3BP1-201ENST00000428678 C19orf44Q9H6X5 657 aa28.16■■■□□ 2.1
UPK3BP1-201ENST00000428678 NUP155O75694 1391 aa28.15■■■□□ 2.1
UPK3BP1-201ENST00000428678 TRPM2O94759 1503 aa28.15■■■□□ 2.1
UPK3BP1-201ENST00000428678 MEX3CQ5U5Q3 659 aaKnown RBP28.14■■■□□ 2.1
UPK3BP1-201ENST00000428678 SPATA31A6Q5VVP1 1343 aa28.14■■■□□ 2.09
UPK3BP1-201ENST00000428678 LRP6O75581 1613 aa28.14■■■□□ 2.09
UPK3BP1-201ENST00000428678 AHDC1Q5TGY3 1603 aaPredicted RBP28.13■■■□□ 2.09
UPK3BP1-201ENST00000428678 AMOTL2Q9Y2J4 779 aa28.12■■■□□ 2.09
UPK3BP1-201ENST00000428678 ITGAEP38570 1179 aa28.11■■■□□ 2.09
UPK3BP1-201ENST00000428678 PTPRUQ92729 1446 aa28.09■■■□□ 2.09
UPK3BP1-201ENST00000428678 SHPRHQ149N8 1683 aa28.08■■■□□ 2.09
UPK3BP1-201ENST00000428678 ZNF772Q68DY9 489 aaPredicted RBP28.05■■■□□ 2.08
UPK3BP1-201ENST00000428678 BRINP3Q76B58 766 aa28.05■■■□□ 2.08
UPK3BP1-201ENST00000428678 SPHKAPQ2M3C7 1700 aa28.03■■■□□ 2.08
UPK3BP1-201ENST00000428678 NRXN3Q9Y4C0 1643 aa28.03■■■□□ 2.08
UPK3BP1-201ENST00000428678 ZNF326Q5BKZ1 582 aaKnown RBP28.02■■■□□ 2.08
UPK3BP1-201ENST00000428678 DCCP43146 1447 aa28.01■■■□□ 2.08
UPK3BP1-201ENST00000428678 XRN1Q8IZH2 1706 aaKnown RBP28.01■■■□□ 2.07
UPK3BP1-201ENST00000428678 TRIM52Q96A61 297 aa28.01■■■□□ 2.07
UPK3BP1-201ENST00000428678 SETBP1Q9Y6X0 1596 aa28■■■□□ 2.07
UPK3BP1-201ENST00000428678 NUTM2BA6NNL0 878 aaPredicted RBP28■■■□□ 2.07
UPK3BP1-201ENST00000428678 NUTM2EB1AL46 878 aaPredicted RBP28■■■□□ 2.07
UPK3BP1-201ENST00000428678 NUTM2AQ8IVF1 878 aaPredicted RBP28■■■□□ 2.07
UPK3BP1-201ENST00000428678 ASXL1Q8IXJ9 1541 aa27.98■■■□□ 2.07
UPK3BP1-201ENST00000428678 MST1RQ04912 1400 aa27.95■■■□□ 2.07
UPK3BP1-201ENST00000428678 PPARGC1BQ86YN6 1023 aaKnown RBP27.95■■■□□ 2.06
UPK3BP1-201ENST00000428678 METP08581 1390 aa27.95■■■□□ 2.06
UPK3BP1-201ENST00000428678 RXRBP28702 533 aa27.93■■■□□ 2.06
UPK3BP1-201ENST00000428678 UPF1Q92900 1129 aaKnown RBP eCLIP27.92■■■□□ 2.06
UPK3BP1-201ENST00000428678 NHSL1Q5SYE7 1610 aa27.92■■■□□ 2.06
UPK3BP1-201ENST00000428678 SETD5Q9C0A6 1442 aa27.91■■■□□ 2.06
UPK3BP1-201ENST00000428678 CLTCL1P53675 1640 aa27.89■■■□□ 2.06
UPK3BP1-201ENST00000428678 ADGRL3Q9HAR2 1447 aa27.89■■■□□ 2.06
UPK3BP1-201ENST00000428678 AFF2P51816 1311 aa27.89■■■□□ 2.05
UPK3BP1-201ENST00000428678 NEXMIFQ5QGS0 1516 aa27.87■■■□□ 2.05
UPK3BP1-201ENST00000428678 LRRC59Q96AG4 307 aaKnown RBP27.87■■■□□ 2.05
UPK3BP1-201ENST00000428678 DDX17Q92841 729 aaKnown RBP27.86■■■□□ 2.05
UPK3BP1-201ENST00000428678 NALCNQ8IZF0 1738 aa27.86■■■□□ 2.05
UPK3BP1-201ENST00000428678 CDK12Q9NYV4 1490 aaPredicted RBP27.83■■■□□ 2.05
UPK3BP1-201ENST00000428678 KIF1BO60333 1816 aa27.83■■■□□ 2.05
UPK3BP1-201ENST00000428678 C8orf37Q96NL8 207 aa27.82■■■□□ 2.04
UPK3BP1-201ENST00000428678 PNPLA6Q8IY17 1366 aa27.81■■■□□ 2.04
UPK3BP1-201ENST00000428678 C1orf167Q5SNV9 1468 aa27.77■■■□□ 2.04
UPK3BP1-201ENST00000428678 QTRT2Q9H974 415 aaKnown RBP27.75■■■□□ 2.03
UPK3BP1-201ENST00000428678 NAIPQ13075 1403 aa27.75■■■□□ 2.03
UPK3BP1-201ENST00000428678 PTCH1Q13635 1447 aa27.75■■■□□ 2.03
UPK3BP1-201ENST00000428678 VGFO15240 615 aaPredicted RBP27.73■■■□□ 2.03
UPK3BP1-201ENST00000428678 ADAMTS2O95450 1211 aa27.73■■■□□ 2.03
UPK3BP1-201ENST00000428678 RBM6P78332 1123 aaKnown RBP27.73■■■□□ 2.03
UPK3BP1-201ENST00000428678 RGS12O14924 1447 aa27.73■■■□□ 2.03
UPK3BP1-201ENST00000428678 ROBO2Q9HCK4 1378 aa27.72■■■□□ 2.03
UPK3BP1-201ENST00000428678 NGLY1Q96IV0 654 aa27.71■■■□□ 2.03
UPK3BP1-201ENST00000428678 RRBP1Q9P2E9 1410 aaKnown RBP27.69■■■□□ 2.02
UPK3BP1-201ENST00000428678 ORAI2Q96SN7 254 aa27.69■■■□□ 2.02
UPK3BP1-201ENST00000428678 LAMC1P11047 1609 aa27.69■■■□□ 2.02
UPK3BP1-201ENST00000428678 SOS2Q07890 1332 aaPredicted RBP27.66■■■□□ 2.02
UPK3BP1-201ENST00000428678 RPGRIP1LQ68CZ1 1315 aa27.65■■■□□ 2.02
UPK3BP1-201ENST00000428678 SLC4A1APQ9BWU0 796 aaKnown RBP27.63■■■□□ 2.01
UPK3BP1-201ENST00000428678 HFM1A2PYH4 1435 aa27.63■■■□□ 2.01
UPK3BP1-201ENST00000428678 PRAG1Q86YV5 1406 aa27.63■■■□□ 2.01
UPK3BP1-201ENST00000428678 PPLO60437 1756 aa27.63■■■□□ 2.01
UPK3BP1-201ENST00000428678 USP21Q9UK80 565 aa27.61■■■□□ 2.01
UPK3BP1-201ENST00000428678 SRCAPQ6ZRS2 3230 aa27.59■■■□□ 2.01
UPK3BP1-201ENST00000428678 TRPC5Q9UL62 973 aaPredicted RBP27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms