RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 DAPK1P53355 1430 aa12.84□□□□□ -0.35
CSTF1-203ENST00000428552 STAG3Q9UJ98 1225 aa12.83□□□□□ -0.36
CSTF1-203ENST00000428552 PTPN23Q9H3S7 1636 aa12.83□□□□□ -0.36
CSTF1-203ENST00000428552 FGD6Q6ZV73 1430 aa12.82□□□□□ -0.36
CSTF1-203ENST00000428552 AHDC1Q5TGY3 1603 aaPredicted RBP12.82□□□□□ -0.36
CSTF1-203ENST00000428552 KANK1Q14678 1352 aa12.81□□□□□ -0.36
CSTF1-203ENST00000428552 PLEKHG1Q9ULL1 1385 aa12.81□□□□□ -0.36
CSTF1-203ENST00000428552 MYO5BQ9ULV0 1848 aa12.81□□□□□ -0.36
CSTF1-203ENST00000428552 SHPRHQ149N8 1683 aa12.81□□□□□ -0.36
CSTF1-203ENST00000428552 DIP2AQ14689 1571 aa12.81□□□□□ -0.36
CSTF1-203ENST00000428552 SPATA31A6Q5VVP1 1343 aa12.8□□□□□ -0.36
CSTF1-203ENST00000428552 TMEM131LA2VDJ0 1609 aa12.79□□□□□ -0.36
CSTF1-203ENST00000428552 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.79□□□□□ -0.36
CSTF1-203ENST00000428552 ADAMTS13Q76LX8 1427 aa12.79□□□□□ -0.36
CSTF1-203ENST00000428552 NCOA3Q9Y6Q9 1424 aa12.79□□□□□ -0.36
CSTF1-203ENST00000428552 GCC2Q8IWJ2 1684 aa12.78□□□□□ -0.36
CSTF1-203ENST00000428552 SLC24A1O60721 1099 aa12.78□□□□□ -0.36
CSTF1-203ENST00000428552 TRIM52Q96A61 297 aa12.78□□□□□ -0.36
CSTF1-203ENST00000428552 SLC52A1Q9NWF4 448 aa12.78□□□□□ -0.36
CSTF1-203ENST00000428552 RIMS2Q9UQ26 1411 aa12.78□□□□□ -0.36
CSTF1-203ENST00000428552 RPRD2Q5VT52 1461 aaKnown RBP12.77□□□□□ -0.37
CSTF1-203ENST00000428552 ZNF772Q68DY9 489 aaPredicted RBP12.76□□□□□ -0.37
CSTF1-203ENST00000428552 TBX22Q9Y458 520 aa12.76□□□□□ -0.37
CSTF1-203ENST00000428552 CDK12Q9NYV4 1490 aaPredicted RBP12.76□□□□□ -0.37
CSTF1-203ENST00000428552 ADGRL2O95490 1459 aa12.75□□□□□ -0.37
CSTF1-203ENST00000428552 ANKRD30AQ9BXX3 1397 aa12.75□□□□□ -0.37
CSTF1-203ENST00000428552 CHIC2Q9UKJ5 165 aa12.75□□□□□ -0.37
CSTF1-203ENST00000428552 SRCAPQ6ZRS2 3230 aa12.75□□□□□ -0.37
CSTF1-203ENST00000428552 BCANQ96GW7 911 aa12.74□□□□□ -0.37
CSTF1-203ENST00000428552 PTPRUQ92729 1446 aa12.73□□□□□ -0.37
CSTF1-203ENST00000428552 MEX3CQ5U5Q3 659 aaKnown RBP12.73□□□□□ -0.37
CSTF1-203ENST00000428552 BRINP3Q76B58 766 aa12.73□□□□□ -0.37
CSTF1-203ENST00000428552 C19orf44Q9H6X5 657 aa12.73□□□□□ -0.37
CSTF1-203ENST00000428552 RXRBP28702 533 aa12.72□□□□□ -0.37
CSTF1-203ENST00000428552 RGS12O14924 1447 aa12.71□□□□□ -0.37
CSTF1-203ENST00000428552 LOC105371045A0A1W2PR82 267 aa12.71□□□□□ -0.37
CSTF1-203ENST00000428552 CADPS2Q86UW7 1296 aa12.71□□□□□ -0.37
CSTF1-203ENST00000428552 ASXL1Q8IXJ9 1541 aa12.71□□□□□ -0.38
CSTF1-203ENST00000428552 SETD5Q9C0A6 1442 aa12.71□□□□□ -0.38
CSTF1-203ENST00000428552 PIK3R4Q99570 1358 aa12.7□□□□□ -0.38
CSTF1-203ENST00000428552 NHSL1Q5SYE7 1610 aa12.7□□□□□ -0.38
CSTF1-203ENST00000428552 UNC13BO14795 1591 aa12.69□□□□□ -0.38
CSTF1-203ENST00000428552 AFF2P51816 1311 aa12.69□□□□□ -0.38
CSTF1-203ENST00000428552 XRN1Q8IZH2 1706 aaKnown RBP12.69□□□□□ -0.38
CSTF1-203ENST00000428552 PPP1R15AO75807 674 aaPredicted RBP12.69□□□□□ -0.38
CSTF1-203ENST00000428552 NUTM2DQ5VT03 806 aaPredicted RBP12.69□□□□□ -0.38
CSTF1-203ENST00000428552 E9PCH4 1651 aa12.69□□□□□ -0.38
CSTF1-203ENST00000428552 ANKRD50Q9ULJ7 1429 aa12.69□□□□□ -0.38
CSTF1-203ENST00000428552 NRXN3Q9Y4C0 1643 aa12.69□□□□□ -0.38
CSTF1-203ENST00000428552 NUTM2BA6NNL0 878 aaPredicted RBP12.68□□□□□ -0.38
CSTF1-203ENST00000428552 NUTM2EB1AL46 878 aaPredicted RBP12.68□□□□□ -0.38
CSTF1-203ENST00000428552 ATF3P18847 181 aa12.68□□□□□ -0.38
CSTF1-203ENST00000428552 C14orf37Q86TY3 774 aa12.68□□□□□ -0.38
CSTF1-203ENST00000428552 NUTM2AQ8IVF1 878 aaPredicted RBP12.68□□□□□ -0.38
CSTF1-203ENST00000428552 DCCP43146 1447 aa12.68□□□□□ -0.38
CSTF1-203ENST00000428552 MST1RQ04912 1400 aa12.68□□□□□ -0.38
CSTF1-203ENST00000428552 TRPM2O94759 1503 aa12.67□□□□□ -0.38
CSTF1-203ENST00000428552 HDGFP51858 240 aaKnown RBP12.66□□□□□ -0.38
CSTF1-203ENST00000428552 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.66□□□□□ -0.38
CSTF1-203ENST00000428552 AMOTL2Q9Y2J4 779 aa12.66□□□□□ -0.38
CSTF1-203ENST00000428552 PNPLA6Q8IY17 1366 aa12.65□□□□□ -0.38
CSTF1-203ENST00000428552 DDX17Q92841 729 aaKnown RBP12.64□□□□□ -0.39
CSTF1-203ENST00000428552 SETBP1Q9Y6X0 1596 aa12.64□□□□□ -0.39
CSTF1-203ENST00000428552 QTRT2Q9H974 415 aaKnown RBP12.63□□□□□ -0.39
CSTF1-203ENST00000428552 IQGAP3Q86VI3 1631 aa12.62□□□□□ -0.39
CSTF1-203ENST00000428552 CHGAP10645 457 aaKnown RBP12.62□□□□□ -0.39
CSTF1-203ENST00000428552 RBM6P78332 1123 aaKnown RBP12.62□□□□□ -0.39
CSTF1-203ENST00000428552 C8orf37Q96NL8 207 aa12.62□□□□□ -0.39
CSTF1-203ENST00000428552 LAMC1P11047 1609 aa12.62□□□□□ -0.39
CSTF1-203ENST00000428552 METP08581 1390 aa12.61□□□□□ -0.39
CSTF1-203ENST00000428552 LRRC59Q96AG4 307 aaKnown RBP12.61□□□□□ -0.39
CSTF1-203ENST00000428552 NALCNQ8IZF0 1738 aa12.61□□□□□ -0.39
CSTF1-203ENST00000428552 ADGRL3Q9HAR2 1447 aa12.6□□□□□ -0.39
CSTF1-203ENST00000428552 EP400Q96L91 3159 aa12.59□□□□□ -0.39
CSTF1-203ENST00000428552 FAM50AQ14320 339 aaKnown RBP12.57□□□□□ -0.4
CSTF1-203ENST00000428552 C1orf167Q5SNV9 1468 aa12.57□□□□□ -0.4
CSTF1-203ENST00000428552 ATAD2Q6PL18 1390 aa12.56□□□□□ -0.4
CSTF1-203ENST00000428552 ATRNO75882 1429 aa12.55□□□□□ -0.4
CSTF1-203ENST00000428552 ADAMTS2O95450 1211 aa12.55□□□□□ -0.4
CSTF1-203ENST00000428552 NEXMIFQ5QGS0 1516 aa12.54□□□□□ -0.4
CSTF1-203ENST00000428552 APLP2Q06481 763 aa12.54□□□□□ -0.4
CSTF1-203ENST00000428552 FNBP4Q8N3X1 1017 aaPredicted RBP12.54□□□□□ -0.4
CSTF1-203ENST00000428552 NGLY1Q96IV0 654 aa12.54□□□□□ -0.4
CSTF1-203ENST00000428552 SOS2Q07890 1332 aaPredicted RBP12.54□□□□□ -0.4
CSTF1-203ENST00000428552 COL22A1Q8NFW1 1626 aaPredicted RBP12.54□□□□□ -0.4
CSTF1-203ENST00000428552 ROCK1Q13464 1354 aa12.54□□□□□ -0.4
CSTF1-203ENST00000428552 SPHKAPQ2M3C7 1700 aa12.53□□□□□ -0.4
CSTF1-203ENST00000428552 NUP155O75694 1391 aa12.53□□□□□ -0.4
CSTF1-203ENST00000428552 ORAI2Q96SN7 254 aa12.52□□□□□ -0.41
CSTF1-203ENST00000428552 USP21Q9UK80 565 aa12.52□□□□□ -0.41
CSTF1-203ENST00000428552 PTCH1Q13635 1447 aa12.52□□□□□ -0.41
CSTF1-203ENST00000428552 MYOM2P54296 1465 aa12.52□□□□□ -0.41
CSTF1-203ENST00000428552 BCL9LQ86UU0 1499 aa12.52□□□□□ -0.41
CSTF1-203ENST00000428552 TRPC5Q9UL62 973 aaPredicted RBP12.51□□□□□ -0.41
CSTF1-203ENST00000428552 ROBO2Q9HCK4 1378 aa12.51□□□□□ -0.41
CSTF1-203ENST00000428552 CLTCL1P53675 1640 aa12.51□□□□□ -0.41
CSTF1-203ENST00000428552 PRAG1Q86YV5 1406 aa12.5□□□□□ -0.41
CSTF1-203ENST00000428552 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
CSTF1-203ENST00000428552 PXDNQ92626 1479 aa12.47□□□□□ -0.41
CSTF1-203ENST00000428552 MARF1Q9Y4F3 1742 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms