RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 ALKQ9UM73 1620 aa23.32■■□□□ 1.32
TSPO-204ENST00000428336 SCAF1Q9H7N4 1312 aaKnown RBP23.32■■□□□ 1.32
TSPO-204ENST00000428336 PLEKHG1Q9ULL1 1385 aa23.31■■□□□ 1.32
TSPO-204ENST00000428336 HFM1A2PYH4 1435 aa23.31■■□□□ 1.32
TSPO-204ENST00000428336 BCANQ96GW7 911 aa23.3■■□□□ 1.32
TSPO-204ENST00000428336 PPP1R15AO75807 674 aaPredicted RBP23.29■■□□□ 1.32
TSPO-204ENST00000428336 HSPA1LP34931 641 aa23.29■■□□□ 1.32
TSPO-204ENST00000428336 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.29■■□□□ 1.32
TSPO-204ENST00000428336 SENP3Q9H4L4 574 aaPredicted RBP23.29■■□□□ 1.32
TSPO-204ENST00000428336 NUTM2DQ5VT03 806 aaPredicted RBP23.27■■□□□ 1.32
TSPO-204ENST00000428336 TMEM94Q12767 1356 aa23.25■■□□□ 1.31
TSPO-204ENST00000428336 MYO5BQ9ULV0 1848 aa23.24■■□□□ 1.31
TSPO-204ENST00000428336 TBX22Q9Y458 520 aa23.24■■□□□ 1.31
TSPO-204ENST00000428336 DISP3Q9P2K9 1392 aa23.24■■□□□ 1.31
TSPO-204ENST00000428336 PROSER2Q86WR7 435 aaPredicted RBP23.23■■□□□ 1.31
TSPO-204ENST00000428336 TRIM52Q96A61 297 aa23.23■■□□□ 1.31
TSPO-204ENST00000428336 RBM33Q96EV2 1170 aaKnown RBP23.21■■□□□ 1.31
TSPO-204ENST00000428336 ADAMTS13Q76LX8 1427 aa23.21■■□□□ 1.31
TSPO-204ENST00000428336 NWD1Q149M9 1564 aa23.19■■□□□ 1.3
TSPO-204ENST00000428336 NKTRP30414 1462 aaKnown RBP23.18■■□□□ 1.3
TSPO-204ENST00000428336 SPHKAPQ2M3C7 1700 aa23.17■■□□□ 1.3
TSPO-204ENST00000428336 SLC4A1APQ9BWU0 796 aaKnown RBP23.17■■□□□ 1.3
TSPO-204ENST00000428336 XIRP1Q702N8 1843 aaKnown RBP23.17■■□□□ 1.3
TSPO-204ENST00000428336 TRPM2O94759 1503 aa23.15■■□□□ 1.3
TSPO-204ENST00000428336 ZNF326Q5BKZ1 582 aaKnown RBP23.15■■□□□ 1.3
TSPO-204ENST00000428336 PIK3R4Q99570 1358 aa23.13■■□□□ 1.29
TSPO-204ENST00000428336 CLTCL1P53675 1640 aa23.12■■□□□ 1.29
TSPO-204ENST00000428336 ILDR2Q71H61 639 aa23.12■■□□□ 1.29
TSPO-204ENST00000428336 DIP2AQ14689 1571 aa23.1■■□□□ 1.29
TSPO-204ENST00000428336 FAM135BQ49AJ0 1406 aa23.1■■□□□ 1.29
TSPO-204ENST00000428336 CHD2O14647 1828 aaKnown RBP23.1■■□□□ 1.29
TSPO-204ENST00000428336 PTPRUQ92729 1446 aa23.08■■□□□ 1.29
TSPO-204ENST00000428336 FOXD1Q16676 465 aa23.08■■□□□ 1.29
TSPO-204ENST00000428336 AMOTL2Q9Y2J4 779 aa23.08■■□□□ 1.29
TSPO-204ENST00000428336 MSH6P52701 1360 aa23.08■■□□□ 1.29
TSPO-204ENST00000428336 NCOA3Q9Y6Q9 1424 aa23.07■■□□□ 1.28
TSPO-204ENST00000428336 SETBP1Q9Y6X0 1596 aa23.06■■□□□ 1.28
TSPO-204ENST00000428336 NEXMIFQ5QGS0 1516 aa23.05■■□□□ 1.28
TSPO-204ENST00000428336 MPHOSPH9Q99550 1183 aa23.05■■□□□ 1.28
TSPO-204ENST00000428336 NRXN3Q9Y4C0 1643 aa23.04■■□□□ 1.28
TSPO-204ENST00000428336 METP08581 1390 aa23.03■■□□□ 1.28
TSPO-204ENST00000428336 SLAIN2Q9P270 581 aa23.03■■□□□ 1.28
TSPO-204ENST00000428336 RPGRIP1LQ68CZ1 1315 aa23.01■■□□□ 1.27
TSPO-204ENST00000428336 SETD5Q9C0A6 1442 aa23■■□□□ 1.27
TSPO-204ENST00000428336 VGFO15240 615 aaPredicted RBP23■■□□□ 1.27
TSPO-204ENST00000428336 C19orf44Q9H6X5 657 aa23■■□□□ 1.27
TSPO-204ENST00000428336 MED1Q15648 1581 aaPredicted RBP22.99■■□□□ 1.27
TSPO-204ENST00000428336 C14orf37Q86TY3 774 aa22.99■■□□□ 1.27
TSPO-204ENST00000428336 KIF1BO60333 1816 aa22.96■■□□□ 1.27
TSPO-204ENST00000428336 ACIN1Q9UKV3 1341 aaKnown RBP22.96■■□□□ 1.27
TSPO-204ENST00000428336 CCDC144AA2RUR9 1427 aa22.95■■□□□ 1.26
TSPO-204ENST00000428336 CADPS2Q86UW7 1296 aa22.95■■□□□ 1.26
TSPO-204ENST00000428336 ROBO1Q9Y6N7 1651 aa22.95■■□□□ 1.26
TSPO-204ENST00000428336 ATF3P18847 181 aa22.94■■□□□ 1.26
TSPO-204ENST00000428336 XRN1Q8IZH2 1706 aaKnown RBP22.94■■□□□ 1.26
TSPO-204ENST00000428336 RAB3GAP2Q9H2M9 1393 aa22.92■■□□□ 1.26
TSPO-204ENST00000428336 SPATA31E1Q6ZUB1 1445 aa22.91■■□□□ 1.26
TSPO-204ENST00000428336 RGL3Q3MIN7 710 aa22.9■■□□□ 1.26
TSPO-204ENST00000428336 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.89■■□□□ 1.26
TSPO-204ENST00000428336 SOCS7O14512 581 aa22.89■■□□□ 1.25
TSPO-204ENST00000428336 ADGRF5Q8IZF2 1346 aa22.88■■□□□ 1.25
TSPO-204ENST00000428336 DCCP43146 1447 aa22.88■■□□□ 1.25
TSPO-204ENST00000428336 PHF23Q9BUL5 403 aaPredicted RBP22.87■■□□□ 1.25
TSPO-204ENST00000428336 PPLO60437 1756 aa22.84■■□□□ 1.25
TSPO-204ENST00000428336 BRINP3Q76B58 766 aa22.84■■□□□ 1.25
TSPO-204ENST00000428336 ANKRD30BQ9BXX2 1392 aa22.84■■□□□ 1.25
TSPO-204ENST00000428336 ROBO2Q9HCK4 1378 aa22.84■■□□□ 1.25
TSPO-204ENST00000428336 ADGRL3Q9HAR2 1447 aa22.83■■□□□ 1.25
TSPO-204ENST00000428336 PTCH1Q13635 1447 aa22.82■■□□□ 1.24
TSPO-204ENST00000428336 PRAG1Q86YV5 1406 aa22.82■■□□□ 1.24
TSPO-204ENST00000428336 SETD1AO15047 1707 aaKnown RBP22.82■■□□□ 1.24
TSPO-204ENST00000428336 MST1RQ04912 1400 aa22.82■■□□□ 1.24
TSPO-204ENST00000428336 RGS17Q9UGC6 210 aaPredicted RBP22.81■■□□□ 1.24
TSPO-204ENST00000428336 JCADQ9P266 1359 aa22.8■■□□□ 1.24
TSPO-204ENST00000428336 HRCP23327 699 aa22.8■■□□□ 1.24
TSPO-204ENST00000428336 PHLPP1O60346 1717 aa22.78■■□□□ 1.24
TSPO-204ENST00000428336 COL16A1Q07092 1604 aaPredicted RBP22.77■■□□□ 1.24
TSPO-204ENST00000428336 AHDC1Q5TGY3 1603 aaPredicted RBP22.77■■□□□ 1.24
TSPO-204ENST00000428336 PIK3C2GO75747 1445 aa22.75■■□□□ 1.23
TSPO-204ENST00000428336 ASXL1Q8IXJ9 1541 aa22.74■■□□□ 1.23
TSPO-204ENST00000428336 TMEM132EQ6IEE7 984 aa22.73■■□□□ 1.23
TSPO-204ENST00000428336 NALCNQ8IZF0 1738 aa22.73■■□□□ 1.23
TSPO-204ENST00000428336 LRPPRCP42704 1394 aaKnown RBP22.73■■□□□ 1.23
TSPO-204ENST00000428336 IFT172Q9UG01 1749 aa22.72■■□□□ 1.23
TSPO-204ENST00000428336 C14orf93Q9H972 538 aaKnown RBP22.72■■□□□ 1.23
TSPO-204ENST00000428336 STK26Q9P289 416 aa22.72■■□□□ 1.23
TSPO-204ENST00000428336 ABCC11Q96J66 1382 aa22.71■■□□□ 1.23
TSPO-204ENST00000428336 C1orf167Q5SNV9 1468 aa22.71■■□□□ 1.23
TSPO-204ENST00000428336 SPATA31A6Q5VVP1 1343 aa22.7■■□□□ 1.22
TSPO-204ENST00000428336 TECPR2O15040 1411 aa22.7■■□□□ 1.22
TSPO-204ENST00000428336 NRXN1Q9ULB1 1477 aa22.7■■□□□ 1.22
TSPO-204ENST00000428336 WAPLQ7Z5K2 1190 aa22.69■■□□□ 1.22
TSPO-204ENST00000428336 DDX17Q92841 729 aaKnown RBP22.69■■□□□ 1.22
TSPO-204ENST00000428336 MYOM2P54296 1465 aa22.67■■□□□ 1.22
TSPO-204ENST00000428336 CFAP70Q5T0N1 1121 aa22.67■■□□□ 1.22
TSPO-204ENST00000428336 ORAI2Q96SN7 254 aa22.67■■□□□ 1.22
TSPO-204ENST00000428336 POTEAQ6S8J7 498 aa22.66■■□□□ 1.22
TSPO-204ENST00000428336 YTHDC2Q9H6S0 1430 aaKnown RBP22.65■■□□□ 1.22
TSPO-204ENST00000428336 PLEKHH1Q9ULM0 1364 aa22.65■■□□□ 1.22
TSPO-204ENST00000428336 LRP6O75581 1613 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms