RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 ZPR1O75312 459 aa12.73□□□□□ -0.37
LINC00458-202ENST00000427299 PLCB2Q00722 1185 aa12.73□□□□□ -0.37
LINC00458-202ENST00000427299 V9GY48 417 aaPredicted RBP12.73□□□□□ -0.37
LINC00458-202ENST00000427299 PCDHB3Q9Y5E6 796 aa12.72□□□□□ -0.37
LINC00458-202ENST00000427299 LCE2BO14633 110 aa12.7□□□□□ -0.38
LINC00458-202ENST00000427299 BLOC1S3Q6QNY0 202 aa12.7□□□□□ -0.38
LINC00458-202ENST00000427299 TESPA1A2RU30 521 aaPredicted RBP12.69□□□□□ -0.38
LINC00458-202ENST00000427299 GFRA3O60609 400 aa12.69□□□□□ -0.38
LINC00458-202ENST00000427299 GGCXP38435 758 aa12.68□□□□□ -0.38
LINC00458-202ENST00000427299 TMUB1Q9BVT8 246 aa12.68□□□□□ -0.38
LINC00458-202ENST00000427299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.67□□□□□ -0.38
LINC00458-202ENST00000427299 ACTN4O43707 911 aaKnown RBP12.67□□□□□ -0.38
LINC00458-202ENST00000427299 HIC1Q14526 733 aa12.66□□□□□ -0.38
LINC00458-202ENST00000427299 PXYLP1Q8TE99 480 aa12.66□□□□□ -0.38
LINC00458-202ENST00000427299 CFHP08603 1231 aa12.65□□□□□ -0.38
LINC00458-202ENST00000427299 SLC10A3P09131 477 aa12.65□□□□□ -0.38
LINC00458-202ENST00000427299 KMT5BQ4FZB7 885 aa12.65□□□□□ -0.38
LINC00458-202ENST00000427299 RBM26Q5T8P6 1007 aaKnown RBP12.65□□□□□ -0.38
LINC00458-202ENST00000427299 OATP04181 439 aa12.64□□□□□ -0.39
LINC00458-202ENST00000427299 NRG2O14511 850 aaPredicted RBP12.63□□□□□ -0.39
LINC00458-202ENST00000427299 TLL1O43897 1013 aa12.62□□□□□ -0.39
LINC00458-202ENST00000427299 TRAF7Q6Q0C0 670 aa12.62□□□□□ -0.39
LINC00458-202ENST00000427299 METTL3Q86U44 580 aaKnown RBP12.62□□□□□ -0.39
LINC00458-202ENST00000427299 GPR37O15354 613 aa12.61□□□□□ -0.39
LINC00458-202ENST00000427299 RNF223E7ERA6 249 aa12.6□□□□□ -0.39
LINC00458-202ENST00000427299 SMYD5Q6GMV2 418 aa12.59□□□□□ -0.39
LINC00458-202ENST00000427299 FECHP22830 423 aa12.58□□□□□ -0.4
LINC00458-202ENST00000427299 GNPATO15228 680 aa12.57□□□□□ -0.4
LINC00458-202ENST00000427299 EMID1Q96A84 441 aaPredicted RBP12.57□□□□□ -0.4
LINC00458-202ENST00000427299 PDZRN3Q9UPQ7 1066 aa12.56□□□□□ -0.4
LINC00458-202ENST00000427299 NR1I2O75469 434 aa12.53□□□□□ -0.4
LINC00458-202ENST00000427299 S1PR4O95977 384 aa12.53□□□□□ -0.4
LINC00458-202ENST00000427299 ADH1BP00325 375 aa12.53□□□□□ -0.4
LINC00458-202ENST00000427299 ANKLE1Q8NAG6 615 aa12.53□□□□□ -0.4
LINC00458-202ENST00000427299 SLC19A1P41440 591 aa12.52□□□□□ -0.41
LINC00458-202ENST00000427299 TRIM67Q6ZTA4 783 aa12.51□□□□□ -0.41
LINC00458-202ENST00000427299 PPEF1O14829 653 aaPredicted RBP12.5□□□□□ -0.41
LINC00458-202ENST00000427299 RSPH4AQ5TD94 716 aa12.5□□□□□ -0.41
LINC00458-202ENST00000427299 DAXXQ9UER7 740 aaPredicted RBP12.5□□□□□ -0.41
LINC00458-202ENST00000427299 SCUBE3Q8IX30 993 aa12.49□□□□□ -0.41
LINC00458-202ENST00000427299 PUS10Q3MIT2 529 aaKnown RBP12.48□□□□□ -0.41
LINC00458-202ENST00000427299 SPRYD7Q5W111 196 aa12.48□□□□□ -0.41
LINC00458-202ENST00000427299 KDM2AQ9Y2K7 1162 aa12.48□□□□□ -0.41
LINC00458-202ENST00000427299 HAP1P54257 671 aaPredicted RBP12.47□□□□□ -0.41
LINC00458-202ENST00000427299 LIAT1Q6ZQX7 453 aa12.46□□□□□ -0.41
LINC00458-202ENST00000427299 NLRP7Q8WX94 980 aa12.46□□□□□ -0.41
LINC00458-202ENST00000427299 PHOX2BQ99453 314 aa12.46□□□□□ -0.41
LINC00458-202ENST00000427299 SLC6A16Q9GZN6 736 aa12.46□□□□□ -0.41
LINC00458-202ENST00000427299 ZNF598Q86UK7 904 aaKnown RBP12.45□□□□□ -0.42
LINC00458-202ENST00000427299 GPIHBP1Q8IV16 184 aa12.44□□□□□ -0.42
LINC00458-202ENST00000427299 RDH13Q8NBN7 331 aa12.44□□□□□ -0.42
LINC00458-202ENST00000427299 SPSB2Q99619 263 aa12.43□□□□□ -0.42
LINC00458-202ENST00000427299 DDX11L8A8MPP1 907 aa12.42□□□□□ -0.42
LINC00458-202ENST00000427299 PLA2G2CQ5R387 149 aa12.42□□□□□ -0.42
LINC00458-202ENST00000427299 MORN1Q5T089 497 aa12.42□□□□□ -0.42
LINC00458-202ENST00000427299 PRR20EP86478 221 aa12.41□□□□□ -0.42
LINC00458-202ENST00000427299 PRR20CP86479 221 aa12.41□□□□□ -0.42
LINC00458-202ENST00000427299 PRR20DP86480 221 aa12.41□□□□□ -0.42
LINC00458-202ENST00000427299 PRR20BP86481 221 aa12.41□□□□□ -0.42
LINC00458-202ENST00000427299 PRR20AP86496 221 aa12.41□□□□□ -0.42
LINC00458-202ENST00000427299 FUT2Q10981 343 aa12.41□□□□□ -0.42
LINC00458-202ENST00000427299 GCGRP47871 477 aa12.4□□□□□ -0.42
LINC00458-202ENST00000427299 ZNF697Q5TEC3 545 aa12.39□□□□□ -0.43
LINC00458-202ENST00000427299 SULF1Q8IWU6 871 aa12.39□□□□□ -0.43
LINC00458-202ENST00000427299 THAP11Q96EK4 314 aa12.39□□□□□ -0.43
LINC00458-202ENST00000427299 ATP6V1AP38606 617 aa12.38□□□□□ -0.43
LINC00458-202ENST00000427299 ZNF787Q6DD87 383 aa12.37□□□□□ -0.43
LINC00458-202ENST00000427299 GDF9O60383 454 aa12.36□□□□□ -0.43
LINC00458-202ENST00000427299 SLC27A5Q9Y2P5 690 aa12.36□□□□□ -0.43
LINC00458-202ENST00000427299 DGAT1O75907 488 aa12.33□□□□□ -0.44
LINC00458-202ENST00000427299 SALL2Q9Y467 1007 aaPredicted RBP12.33□□□□□ -0.44
LINC00458-202ENST00000427299 TNFRSF10AO00220 468 aa12.32□□□□□ -0.44
LINC00458-202ENST00000427299 PKDCCQ504Y2 493 aa12.32□□□□□ -0.44
LINC00458-202ENST00000427299 FAM160A2Q8N612 972 aaPredicted RBP12.32□□□□□ -0.44
LINC00458-202ENST00000427299 FMNL1O95466 1100 aaPredicted RBP12.31□□□□□ -0.44
LINC00458-202ENST00000427299 MYT1Q01538 1121 aa12.31□□□□□ -0.44
LINC00458-202ENST00000427299 MAP2K5Q13163 448 aa12.31□□□□□ -0.44
LINC00458-202ENST00000427299 BRICD5Q6PL45 260 aa12.3□□□□□ -0.44
LINC00458-202ENST00000427299 FCF1Q9Y324 198 aaKnown RBP12.29□□□□□ -0.44
LINC00458-202ENST00000427299 RPIAP49247 311 aa12.28□□□□□ -0.44
LINC00458-202ENST00000427299 PRDM9Q9NQV7 894 aa12.28□□□□□ -0.44
LINC00458-202ENST00000427299 PKD2L1Q9P0L9 805 aa12.28□□□□□ -0.44
LINC00458-202ENST00000427299 CD46P15529 392 aa12.27□□□□□ -0.45
LINC00458-202ENST00000427299 RNF19BQ6ZMZ0 732 aa12.27□□□□□ -0.45
LINC00458-202ENST00000427299 VSIG10Q8N0Z9 540 aa12.27□□□□□ -0.45
LINC00458-202ENST00000427299 ZNF775Q96BV0 537 aaPredicted RBP12.27□□□□□ -0.45
LINC00458-202ENST00000427299 FAM187AA6NFU0 413 aa12.26□□□□□ -0.45
LINC00458-202ENST00000427299 IRF6O14896 467 aa12.26□□□□□ -0.45
LINC00458-202ENST00000427299 LMOD2Q6P5Q4 547 aa12.26□□□□□ -0.45
LINC00458-202ENST00000427299 GRIPAP1Q4V328 841 aa12.25□□□□□ -0.45
LINC00458-202ENST00000427299 MSS51Q4VC12 460 aa12.25□□□□□ -0.45
LINC00458-202ENST00000427299 TULP1O00294 542 aaPredicted RBP12.23□□□□□ -0.45
LINC00458-202ENST00000427299 FOXC1Q12948 553 aa12.22□□□□□ -0.45
LINC00458-202ENST00000427299 MINK1Q8N4C8 1332 aaPredicted RBP12.21□□□□□ -0.45
LINC00458-202ENST00000427299 KDM4AO75164 1064 aa12.2□□□□□ -0.46
LINC00458-202ENST00000427299 CD2BP2O95400 341 aaKnown RBP12.2□□□□□ -0.46
LINC00458-202ENST00000427299 MDM2Q00987 491 aaPredicted RBP12.2□□□□□ -0.46
LINC00458-202ENST00000427299 Q3C1V9 767 aa12.2□□□□□ -0.46
LINC00458-202ENST00000427299 CCDC102AQ96A19 550 aa12.18□□□□□ -0.46
LINC00458-202ENST00000427299 TOR4AQ9NXH8 423 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms