RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 CCAR2Q8N163 923 aaKnown RBP22.03■■□□□ 1.12
ARHGEF28-203ENST00000426542 NOL10Q9BSC4 688 aaKnown RBP22.01■■□□□ 1.11
ARHGEF28-203ENST00000426542 LRRFIP1Q32MZ4 808 aaKnown RBP22.01■■□□□ 1.11
ARHGEF28-203ENST00000426542 AMOTL1Q8IY63 956 aa22■■□□□ 1.11
ARHGEF28-203ENST00000426542 ANO2Q9NQ90 1003 aa22■■□□□ 1.11
ARHGEF28-203ENST00000426542 RUFY2Q8WXA3 655 aa22■■□□□ 1.11
ARHGEF28-203ENST00000426542 SKOR2Q2VWA4 1001 aaPredicted RBP22■■□□□ 1.11
ARHGEF28-203ENST00000426542 TPM1P09493 284 aa22■■□□□ 1.11
ARHGEF28-203ENST00000426542 TRIM34Q9BYJ4 488 aa22■■□□□ 1.11
ARHGEF28-203ENST00000426542 APAF1O14727 1248 aa21.99■■□□□ 1.11
ARHGEF28-203ENST00000426542 TRIM29Q14134 588 aa21.99■■□□□ 1.11
ARHGEF28-203ENST00000426542 USP47Q96K76 1375 aa21.99■■□□□ 1.11
ARHGEF28-203ENST00000426542 IFIT2P09913 472 aaKnown RBP21.98■■□□□ 1.11
ARHGEF28-203ENST00000426542 WWC1Q8IX03 1113 aa21.98■■□□□ 1.11
ARHGEF28-203ENST00000426542 APPP05067 770 aa21.98■■□□□ 1.11
ARHGEF28-203ENST00000426542 TCEAL9Q9UHQ7 104 aa21.98■■□□□ 1.11
ARHGEF28-203ENST00000426542 DIAPH1O60610 1272 aaKnown RBP21.97■■□□□ 1.11
ARHGEF28-203ENST00000426542 PRKRIP1Q9H875 184 aaPredicted RBP21.97■■□□□ 1.11
ARHGEF28-203ENST00000426542 CPLX2Q6PUV4 134 aaKnown RBP21.97■■□□□ 1.11
ARHGEF28-203ENST00000426542 ZKSCAN1P17029 563 aaPredicted RBP21.96■■□□□ 1.11
ARHGEF28-203ENST00000426542 DDX19BQ9UMR2 479 aa21.96■■□□□ 1.11
ARHGEF28-203ENST00000426542 WIZO95785 1651 aa21.95■■□□□ 1.1
ARHGEF28-203ENST00000426542 PCMTD1Q96MG8 357 aaPredicted RBP21.95■■□□□ 1.1
ARHGEF28-203ENST00000426542 TOP2AP11388 1531 aaKnown RBP21.95■■□□□ 1.1
ARHGEF28-203ENST00000426542 REC8O95072 547 aa21.95■■□□□ 1.1
ARHGEF28-203ENST00000426542 RIPK4P57078 832 aa21.95■■□□□ 1.1
ARHGEF28-203ENST00000426542 CTDP1Q9Y5B0 961 aaPredicted RBP21.95■■□□□ 1.1
ARHGEF28-203ENST00000426542 SYTL4Q96C24 671 aaPredicted RBP21.94■■□□□ 1.1
ARHGEF28-203ENST00000426542 ZBED9Q6R2W3 1325 aa21.94■■□□□ 1.1
ARHGEF28-203ENST00000426542 DHX57Q6P158 1386 aaKnown RBP21.94■■□□□ 1.1
ARHGEF28-203ENST00000426542 VPS37DQ86XT2 251 aa21.93■■□□□ 1.1
ARHGEF28-203ENST00000426542 ZNF592Q92610 1267 aa21.93■■□□□ 1.1
ARHGEF28-203ENST00000426542 FBXW7Q969H0 707 aa21.93■■□□□ 1.1
ARHGEF28-203ENST00000426542 CPLX1O14810 134 aa21.92■■□□□ 1.1
ARHGEF28-203ENST00000426542 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.92■■□□□ 1.1
ARHGEF28-203ENST00000426542 DHX16O60231 1041 aaKnown RBP21.92■■□□□ 1.1
ARHGEF28-203ENST00000426542 DDX58O95786 925 aaKnown RBP21.91■■□□□ 1.1
ARHGEF28-203ENST00000426542 DZIP1LQ8IYY4 767 aaKnown RBP21.91■■□□□ 1.1
ARHGEF28-203ENST00000426542 PSME1Q06323 249 aa21.91■■□□□ 1.1
ARHGEF28-203ENST00000426542 GSE1Q14687 1217 aa21.91■■□□□ 1.1
ARHGEF28-203ENST00000426542 CCDC70Q6NSX1 233 aa21.91■■□□□ 1.1
ARHGEF28-203ENST00000426542 API5Q9BZZ5 524 aaKnown RBP21.91■■□□□ 1.1
ARHGEF28-203ENST00000426542 G3BP1Q13283 466 aaKnown RBP eCLIP21.9■■□□□ 1.1
ARHGEF28-203ENST00000426542 FKBP5Q13451 457 aaPredicted RBP21.9■■□□□ 1.1
ARHGEF28-203ENST00000426542 CADPSQ9ULU8 1353 aa21.9■■□□□ 1.1
ARHGEF28-203ENST00000426542 NFXL1Q6ZNB6 911 aa21.89■■□□□ 1.09
ARHGEF28-203ENST00000426542 CCDC47Q96A33 483 aaKnown RBP21.89■■□□□ 1.09
ARHGEF28-203ENST00000426542 ROCK1Q13464 1354 aa21.89■■□□□ 1.09
ARHGEF28-203ENST00000426542 TRDNQ13061 729 aa21.88■■□□□ 1.09
ARHGEF28-203ENST00000426542 BICD2Q8TD16 824 aa21.88■■□□□ 1.09
ARHGEF28-203ENST00000426542 HSP90AA2PQ14568 343 aaPredicted RBP21.88■■□□□ 1.09
ARHGEF28-203ENST00000426542 RNF20Q5VTR2 975 aa21.87■■□□□ 1.09
ARHGEF28-203ENST00000426542 FOSBP53539 338 aa21.86■■□□□ 1.09
ARHGEF28-203ENST00000426542 SETQ01105 290 aaPredicted RBP21.86■■□□□ 1.09
ARHGEF28-203ENST00000426542 ANKRD20A12PQ8NF67 263 aa21.86■■□□□ 1.09
ARHGEF28-203ENST00000426542 PTPRGP23470 1445 aa21.85■■□□□ 1.09
ARHGEF28-203ENST00000426542 ERICH2A1L162 156 aa21.85■■□□□ 1.09
ARHGEF28-203ENST00000426542 TSPYL4Q9UJ04 414 aa21.85■■□□□ 1.09
ARHGEF28-203ENST00000426542 GPS2Q13227 327 aa21.84■■□□□ 1.09
ARHGEF28-203ENST00000426542 IPO7O95373 1038 aaKnown RBP21.84■■□□□ 1.09
ARHGEF28-203ENST00000426542 RUNDC1Q96C34 613 aa21.84■■□□□ 1.09
ARHGEF28-203ENST00000426542 HOOK1Q9UJC3 728 aaKnown RBP21.84■■□□□ 1.09
ARHGEF28-203ENST00000426542 VPS37CA5D8V6 355 aaPredicted RBP21.83■■□□□ 1.09
ARHGEF28-203ENST00000426542 MEX3CQ5U5Q3 659 aaKnown RBP21.83■■□□□ 1.09
ARHGEF28-203ENST00000426542 INTS3Q68E01 1043 aaKnown RBP21.82■■□□□ 1.08
ARHGEF28-203ENST00000426542 HMOX1P09601 288 aa21.82■■□□□ 1.08
ARHGEF28-203ENST00000426542 SMC3Q9UQE7 1217 aa21.82■■□□□ 1.08
ARHGEF28-203ENST00000426542 RSPH6AQ9H0K4 717 aa21.8■■□□□ 1.08
ARHGEF28-203ENST00000426542 CYB5RLQ6IPT4 315 aa21.8■■□□□ 1.08
ARHGEF28-203ENST00000426542 HOMER1Q86YM7 354 aa21.8■■□□□ 1.08
ARHGEF28-203ENST00000426542 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.8■■□□□ 1.08
ARHGEF28-203ENST00000426542 CHMP5Q9NZZ3 219 aa21.79■■□□□ 1.08
ARHGEF28-203ENST00000426542 PATL2C9JE40 543 aaKnown RBP21.79■■□□□ 1.08
ARHGEF28-203ENST00000426542 GNAI1P63096 354 aa21.79■■□□□ 1.08
ARHGEF28-203ENST00000426542 ERC2O15083 957 aa21.78■■□□□ 1.08
ARHGEF28-203ENST00000426542 RIC3Q7Z5B4 369 aa21.78■■□□□ 1.08
ARHGEF28-203ENST00000426542 LNPKQ9C0E8 428 aa21.78■■□□□ 1.08
ARHGEF28-203ENST00000426542 AIMP1Q12904 312 aaKnown RBP21.78■■□□□ 1.08
ARHGEF28-203ENST00000426542 SASS6Q6UVJ0 657 aa21.78■■□□□ 1.08
ARHGEF28-203ENST00000426542 NEUROD6Q96NK8 337 aa21.77■■□□□ 1.08
ARHGEF28-203ENST00000426542 HSP90AB4PQ58FF6 505 aa21.77■■□□□ 1.08
ARHGEF28-203ENST00000426542 SAMD1Q6SPF0 538 aaPredicted RBP21.77■■□□□ 1.08
ARHGEF28-203ENST00000426542 CCDC43Q96MW1 224 aaKnown RBP21.76■■□□□ 1.07
ARHGEF28-203ENST00000426542 FYB1O15117 783 aa21.76■■□□□ 1.07
ARHGEF28-203ENST00000426542 RAPGEF4Q8WZA2 1011 aa21.76■■□□□ 1.07
ARHGEF28-203ENST00000426542 RBM33Q96EV2 1170 aaKnown RBP21.76■■□□□ 1.07
ARHGEF28-203ENST00000426542 FBXO3Q9UK99 471 aa21.74■■□□□ 1.07
ARHGEF28-203ENST00000426542 SAFBQ15424 915 aaKnown RBP eCLIP21.74■■□□□ 1.07
ARHGEF28-203ENST00000426542 WASHC4Q2M389 1173 aa21.74■■□□□ 1.07
ARHGEF28-203ENST00000426542 ZNF771Q7L3S4 317 aaPredicted RBP21.74■■□□□ 1.07
ARHGEF28-203ENST00000426542 NUTM2GQ5VZR2 741 aa21.73■■□□□ 1.07
ARHGEF28-203ENST00000426542 CCDC27Q2M243 656 aa21.73■■□□□ 1.07
ARHGEF28-203ENST00000426542 CWC22Q9HCG8 908 aaKnown RBP21.72■■□□□ 1.07
ARHGEF28-203ENST00000426542 NUCB2P80303 420 aa21.72■■□□□ 1.07
ARHGEF28-203ENST00000426542 RALYLQ86SE5 291 aaKnown RBP21.72■■□□□ 1.07
ARHGEF28-203ENST00000426542 CCDC73Q6ZRK6 1079 aa21.72■■□□□ 1.07
ARHGEF28-203ENST00000426542 GGNBP2Q9H3C7 697 aa21.72■■□□□ 1.07
ARHGEF28-203ENST00000426542 C22orf23Q9BZE7 217 aa21.71■■□□□ 1.07
ARHGEF28-203ENST00000426542 NAP1L1P55209 391 aaKnown RBP21.71■■□□□ 1.07
ARHGEF28-203ENST00000426542 PANK1Q8TE04 598 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms