RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 SLAIN2Q9P270 581 aa21.33■■□□□ 1.01
VEGFB-202ENST00000426086 MSH6P52701 1360 aa21.33■■□□□ 1
VEGFB-202ENST00000426086 MYO5BQ9ULV0 1848 aa21.32■■□□□ 1
VEGFB-202ENST00000426086 ZFYVE9O95405 1425 aa21.31■■□□□ 1
VEGFB-202ENST00000426086 BCANQ96GW7 911 aa21.31■■□□□ 1
VEGFB-202ENST00000426086 CHD2O14647 1828 aaKnown RBP21.3■■□□□ 1
VEGFB-202ENST00000426086 COL16A1Q07092 1604 aaPredicted RBP21.29■■□□□ 1
VEGFB-202ENST00000426086 SLC52A1Q9NWF4 448 aa21.29■■□□□ 1
VEGFB-202ENST00000426086 JCADQ9P266 1359 aa21.28■■□□□ 1
VEGFB-202ENST00000426086 LRP6O75581 1613 aa21.28■■□□□ 1
VEGFB-202ENST00000426086 PLEKHG1Q9ULL1 1385 aa21.27■■□□□ 1
VEGFB-202ENST00000426086 GCC2Q8IWJ2 1684 aa21.27■■□□□ 1
VEGFB-202ENST00000426086 RIMS2Q9UQ26 1411 aa21.26■□□□□ 0.99
VEGFB-202ENST00000426086 ADGRL2O95490 1459 aa21.26■□□□□ 0.99
VEGFB-202ENST00000426086 TMEM131LA2VDJ0 1609 aa21.26■□□□□ 0.99
VEGFB-202ENST00000426086 RPRD2Q5VT52 1461 aaKnown RBP21.23■□□□□ 0.99
VEGFB-202ENST00000426086 NUTM2DQ5VT03 806 aaPredicted RBP21.22■□□□□ 0.99
VEGFB-202ENST00000426086 ADAMTS13Q76LX8 1427 aa21.21■□□□□ 0.99
VEGFB-202ENST00000426086 ANKRD50Q9ULJ7 1429 aa21.21■□□□□ 0.99
VEGFB-202ENST00000426086 PPP1R15AO75807 674 aaPredicted RBP21.2■□□□□ 0.98
VEGFB-202ENST00000426086 APLP2Q06481 763 aa21.2■□□□□ 0.98
VEGFB-202ENST00000426086 TBX22Q9Y458 520 aa21.2■□□□□ 0.98
VEGFB-202ENST00000426086 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.19■□□□□ 0.98
VEGFB-202ENST00000426086 NCOA3Q9Y6Q9 1424 aa21.17■□□□□ 0.98
VEGFB-202ENST00000426086 AHDC1Q5TGY3 1603 aaPredicted RBP21.16■□□□□ 0.98
VEGFB-202ENST00000426086 SPATA31A6Q5VVP1 1343 aa21.16■□□□□ 0.98
VEGFB-202ENST00000426086 CHGAP10645 457 aaKnown RBP21.16■□□□□ 0.98
VEGFB-202ENST00000426086 FAM50AQ14320 339 aaKnown RBP21.16■□□□□ 0.98
VEGFB-202ENST00000426086 UPF1Q92900 1129 aaKnown RBP eCLIP21.16■□□□□ 0.98
VEGFB-202ENST00000426086 TRIM52Q96A61 297 aa21.16■□□□□ 0.98
VEGFB-202ENST00000426086 C14orf37Q86TY3 774 aa21.15■□□□□ 0.98
VEGFB-202ENST00000426086 PTPRUQ92729 1446 aa21.14■□□□□ 0.98
VEGFB-202ENST00000426086 E9PCH4 1651 aa21.14■□□□□ 0.97
VEGFB-202ENST00000426086 SHPRHQ149N8 1683 aa21.14■□□□□ 0.97
VEGFB-202ENST00000426086 HDGFP51858 240 aaKnown RBP21.13■□□□□ 0.97
VEGFB-202ENST00000426086 MEX3CQ5U5Q3 659 aaKnown RBP21.13■□□□□ 0.97
VEGFB-202ENST00000426086 UNC13BO14795 1591 aa21.13■□□□□ 0.97
VEGFB-202ENST00000426086 DIP2AQ14689 1571 aa21.12■□□□□ 0.97
VEGFB-202ENST00000426086 C19orf44Q9H6X5 657 aa21.12■□□□□ 0.97
VEGFB-202ENST00000426086 CADPS2Q86UW7 1296 aa21.11■□□□□ 0.97
VEGFB-202ENST00000426086 ZNF772Q68DY9 489 aaPredicted RBP21.1■□□□□ 0.97
VEGFB-202ENST00000426086 BRINP3Q76B58 766 aa21.1■□□□□ 0.97
VEGFB-202ENST00000426086 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.1■□□□□ 0.97
VEGFB-202ENST00000426086 ATF3P18847 181 aa21.09■□□□□ 0.97
VEGFB-202ENST00000426086 NUTM2BA6NNL0 878 aaPredicted RBP21.08■□□□□ 0.97
VEGFB-202ENST00000426086 NUTM2EB1AL46 878 aaPredicted RBP21.08■□□□□ 0.97
VEGFB-202ENST00000426086 NUTM2AQ8IVF1 878 aaPredicted RBP21.08■□□□□ 0.97
VEGFB-202ENST00000426086 AMOTL2Q9Y2J4 779 aa21.08■□□□□ 0.97
VEGFB-202ENST00000426086 PIK3R4Q99570 1358 aa21.08■□□□□ 0.96
VEGFB-202ENST00000426086 TRPM2O94759 1503 aa21.05■□□□□ 0.96
VEGFB-202ENST00000426086 NRXN3Q9Y4C0 1643 aa21.04■□□□□ 0.96
VEGFB-202ENST00000426086 RXRBP28702 533 aa21.04■□□□□ 0.96
VEGFB-202ENST00000426086 IQGAP3Q86VI3 1631 aa21.04■□□□□ 0.96
VEGFB-202ENST00000426086 ASXL1Q8IXJ9 1541 aa21.04■□□□□ 0.96
VEGFB-202ENST00000426086 XRN1Q8IZH2 1706 aaKnown RBP21.03■□□□□ 0.96
VEGFB-202ENST00000426086 MST1RQ04912 1400 aa21.02■□□□□ 0.96
VEGFB-202ENST00000426086 AFF2P51816 1311 aa21.02■□□□□ 0.95
VEGFB-202ENST00000426086 DDX17Q92841 729 aaKnown RBP21.01■□□□□ 0.95
VEGFB-202ENST00000426086 SETD5Q9C0A6 1442 aa21■□□□□ 0.95
VEGFB-202ENST00000426086 NHSL1Q5SYE7 1610 aa21■□□□□ 0.95
VEGFB-202ENST00000426086 DCCP43146 1447 aa20.99■□□□□ 0.95
VEGFB-202ENST00000426086 CDK12Q9NYV4 1490 aaPredicted RBP20.99■□□□□ 0.95
VEGFB-202ENST00000426086 METP08581 1390 aa20.98■□□□□ 0.95
VEGFB-202ENST00000426086 SETBP1Q9Y6X0 1596 aa20.97■□□□□ 0.95
VEGFB-202ENST00000426086 NUP155O75694 1391 aa20.97■□□□□ 0.95
VEGFB-202ENST00000426086 ROCK1Q13464 1354 aa20.96■□□□□ 0.95
VEGFB-202ENST00000426086 RGS12O14924 1447 aa20.95■□□□□ 0.95
VEGFB-202ENST00000426086 PNPLA6Q8IY17 1366 aa20.94■□□□□ 0.94
VEGFB-202ENST00000426086 C8orf37Q96NL8 207 aa20.93■□□□□ 0.94
VEGFB-202ENST00000426086 LRRC59Q96AG4 307 aaKnown RBP20.92■□□□□ 0.94
VEGFB-202ENST00000426086 NALCNQ8IZF0 1738 aa20.92■□□□□ 0.94
VEGFB-202ENST00000426086 QTRT2Q9H974 415 aaKnown RBP20.91■□□□□ 0.94
VEGFB-202ENST00000426086 ADGRL3Q9HAR2 1447 aa20.91■□□□□ 0.94
VEGFB-202ENST00000426086 SPHKAPQ2M3C7 1700 aa20.9■□□□□ 0.94
VEGFB-202ENST00000426086 ITGAEP38570 1179 aa20.89■□□□□ 0.93
VEGFB-202ENST00000426086 RBM6P78332 1123 aaKnown RBP20.88■□□□□ 0.93
VEGFB-202ENST00000426086 ZNF326Q5BKZ1 582 aaKnown RBP20.88■□□□□ 0.93
VEGFB-202ENST00000426086 NEXMIFQ5QGS0 1516 aa20.87■□□□□ 0.93
VEGFB-202ENST00000426086 ADAMTS2O95450 1211 aa20.86■□□□□ 0.93
VEGFB-202ENST00000426086 C1orf167Q5SNV9 1468 aa20.85■□□□□ 0.93
VEGFB-202ENST00000426086 CLTCL1P53675 1640 aa20.85■□□□□ 0.93
VEGFB-202ENST00000426086 ORAI2Q96SN7 254 aa20.83■□□□□ 0.93
VEGFB-202ENST00000426086 NGLY1Q96IV0 654 aa20.82■□□□□ 0.92
VEGFB-202ENST00000426086 LAMC1P11047 1609 aa20.82■□□□□ 0.92
VEGFB-202ENST00000426086 ROBO2Q9HCK4 1378 aa20.8■□□□□ 0.92
VEGFB-202ENST00000426086 SOS2Q07890 1332 aaPredicted RBP20.79■□□□□ 0.92
VEGFB-202ENST00000426086 PPARGC1BQ86YN6 1023 aaKnown RBP20.78■□□□□ 0.92
VEGFB-202ENST00000426086 USP21Q9UK80 565 aa20.77■□□□□ 0.92
VEGFB-202ENST00000426086 PTCH1Q13635 1447 aa20.75■□□□□ 0.91
VEGFB-202ENST00000426086 ATAD2Q6PL18 1390 aa20.73■□□□□ 0.91
VEGFB-202ENST00000426086 FNBP4Q8N3X1 1017 aaPredicted RBP20.73■□□□□ 0.91
VEGFB-202ENST00000426086 KIF1BO60333 1816 aa20.73■□□□□ 0.91
VEGFB-202ENST00000426086 ATRNO75882 1429 aa20.72■□□□□ 0.91
VEGFB-202ENST00000426086 TRPC5Q9UL62 973 aaPredicted RBP20.72■□□□□ 0.91
VEGFB-202ENST00000426086 COL22A1Q8NFW1 1626 aaPredicted RBP20.71■□□□□ 0.91
VEGFB-202ENST00000426086 PRAG1Q86YV5 1406 aa20.7■□□□□ 0.9
VEGFB-202ENST00000426086 MYOM2P54296 1465 aa20.69■□□□□ 0.9
VEGFB-202ENST00000426086 BCL9LQ86UU0 1499 aa20.69■□□□□ 0.9
VEGFB-202ENST00000426086 VGFO15240 615 aaPredicted RBP20.66■□□□□ 0.9
VEGFB-202ENST00000426086 XPCQ01831 940 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms