RNA–Protein interactions for RNA: ENST00000425430.5

HDAC11-210, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 1,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-210ENST00000425430 ADGRL2O95490 1459 aa23.56■■□□□ 1.36
HDAC11-210ENST00000425430 MYO5BQ9ULV0 1848 aa23.55■■□□□ 1.36
HDAC11-210ENST00000425430 GCC2Q8IWJ2 1684 aa23.54■■□□□ 1.36
HDAC11-210ENST00000425430 MSH6P52701 1360 aa23.53■■□□□ 1.36
HDAC11-210ENST00000425430 SLC52A1Q9NWF4 448 aa23.53■■□□□ 1.36
HDAC11-210ENST00000425430 RPRD2Q5VT52 1461 aaKnown RBP23.52■■□□□ 1.36
HDAC11-210ENST00000425430 PHLPP1O60346 1717 aa23.51■■□□□ 1.35
HDAC11-210ENST00000425430 FAM50AQ14320 339 aaKnown RBP23.51■■□□□ 1.35
HDAC11-210ENST00000425430 ANKRD50Q9ULJ7 1429 aa23.5■■□□□ 1.35
HDAC11-210ENST00000425430 PPP1R15AO75807 674 aaPredicted RBP23.5■■□□□ 1.35
HDAC11-210ENST00000425430 ZFYVE9O95405 1425 aa23.49■■□□□ 1.35
HDAC11-210ENST00000425430 POTEAQ6S8J7 498 aa23.48■■□□□ 1.35
HDAC11-210ENST00000425430 PLEKHG1Q9ULL1 1385 aa23.48■■□□□ 1.35
HDAC11-210ENST00000425430 RIMS2Q9UQ26 1411 aa23.48■■□□□ 1.35
HDAC11-210ENST00000425430 CHD2O14647 1828 aaKnown RBP23.47■■□□□ 1.35
HDAC11-210ENST00000425430 TMEM131LA2VDJ0 1609 aa23.47■■□□□ 1.35
HDAC11-210ENST00000425430 UNC13BO14795 1591 aa23.44■■□□□ 1.34
HDAC11-210ENST00000425430 SETD1AO15047 1707 aaKnown RBP23.43■■□□□ 1.34
HDAC11-210ENST00000425430 SLAIN2Q9P270 581 aa23.43■■□□□ 1.34
HDAC11-210ENST00000425430 CHGAP10645 457 aaKnown RBP23.42■■□□□ 1.34
HDAC11-210ENST00000425430 JCADQ9P266 1359 aa23.41■■□□□ 1.34
HDAC11-210ENST00000425430 HDGFP51858 240 aaKnown RBP23.41■■□□□ 1.34
HDAC11-210ENST00000425430 C14orf37Q86TY3 774 aa23.4■■□□□ 1.34
HDAC11-210ENST00000425430 COL16A1Q07092 1604 aaPredicted RBP23.4■■□□□ 1.34
HDAC11-210ENST00000425430 E9PCH4 1651 aa23.39■■□□□ 1.34
HDAC11-210ENST00000425430 DIP2AQ14689 1571 aa23.37■■□□□ 1.33
HDAC11-210ENST00000425430 NUTM2DQ5VT03 806 aaPredicted RBP23.37■■□□□ 1.33
HDAC11-210ENST00000425430 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.36■■□□□ 1.33
HDAC11-210ENST00000425430 TBX22Q9Y458 520 aa23.35■■□□□ 1.33
HDAC11-210ENST00000425430 ADAMTS13Q76LX8 1427 aa23.34■■□□□ 1.33
HDAC11-210ENST00000425430 IQGAP3Q86VI3 1631 aa23.34■■□□□ 1.33
HDAC11-210ENST00000425430 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.34■■□□□ 1.33
HDAC11-210ENST00000425430 NCOA3Q9Y6Q9 1424 aa23.33■■□□□ 1.33
HDAC11-210ENST00000425430 LRP6O75581 1613 aa23.32■■□□□ 1.32
HDAC11-210ENST00000425430 TRPM2O94759 1503 aa23.31■■□□□ 1.32
HDAC11-210ENST00000425430 AHDC1Q5TGY3 1603 aaPredicted RBP23.3■■□□□ 1.32
HDAC11-210ENST00000425430 MEX3CQ5U5Q3 659 aaKnown RBP23.3■■□□□ 1.32
HDAC11-210ENST00000425430 ATF3P18847 181 aa23.29■■□□□ 1.32
HDAC11-210ENST00000425430 CADPS2Q86UW7 1296 aa23.29■■□□□ 1.32
HDAC11-210ENST00000425430 PIK3R4Q99570 1358 aa23.28■■□□□ 1.32
HDAC11-210ENST00000425430 RRBP1Q9P2E9 1410 aaKnown RBP23.28■■□□□ 1.32
HDAC11-210ENST00000425430 ITGAEP38570 1179 aa23.28■■□□□ 1.32
HDAC11-210ENST00000425430 SHPRHQ149N8 1683 aa23.28■■□□□ 1.32
HDAC11-210ENST00000425430 SPATA31A6Q5VVP1 1343 aa23.28■■□□□ 1.32
HDAC11-210ENST00000425430 ROCK1Q13464 1354 aa23.27■■□□□ 1.31
HDAC11-210ENST00000425430 C19orf44Q9H6X5 657 aa23.26■■□□□ 1.31
HDAC11-210ENST00000425430 NUP155O75694 1391 aa23.25■■□□□ 1.31
HDAC11-210ENST00000425430 PTPRUQ92729 1446 aa23.24■■□□□ 1.31
HDAC11-210ENST00000425430 AMOTL2Q9Y2J4 779 aa23.22■■□□□ 1.31
HDAC11-210ENST00000425430 ZNF772Q68DY9 489 aaPredicted RBP23.21■■□□□ 1.31
HDAC11-210ENST00000425430 NRXN3Q9Y4C0 1643 aa23.21■■□□□ 1.31
HDAC11-210ENST00000425430 XRN1Q8IZH2 1706 aaKnown RBP23.21■■□□□ 1.31
HDAC11-210ENST00000425430 SPHKAPQ2M3C7 1700 aa23.2■■□□□ 1.3
HDAC11-210ENST00000425430 TRIM52Q96A61 297 aa23.2■■□□□ 1.3
HDAC11-210ENST00000425430 BRINP3Q76B58 766 aa23.19■■□□□ 1.3
HDAC11-210ENST00000425430 SETBP1Q9Y6X0 1596 aa23.18■■□□□ 1.3
HDAC11-210ENST00000425430 ASXL1Q8IXJ9 1541 aa23.18■■□□□ 1.3
HDAC11-210ENST00000425430 DCCP43146 1447 aa23.18■■□□□ 1.3
HDAC11-210ENST00000425430 NUTM2BA6NNL0 878 aaPredicted RBP23.17■■□□□ 1.3
HDAC11-210ENST00000425430 NUTM2EB1AL46 878 aaPredicted RBP23.17■■□□□ 1.3
HDAC11-210ENST00000425430 NUTM2AQ8IVF1 878 aaPredicted RBP23.17■■□□□ 1.3
HDAC11-210ENST00000425430 ZNF326Q5BKZ1 582 aaKnown RBP23.15■■□□□ 1.3
HDAC11-210ENST00000425430 NHSL1Q5SYE7 1610 aa23.14■■□□□ 1.29
HDAC11-210ENST00000425430 MST1RQ04912 1400 aa23.13■■□□□ 1.29
HDAC11-210ENST00000425430 RXRBP28702 533 aa23.1■■□□□ 1.29
HDAC11-210ENST00000425430 UPF1Q92900 1129 aaKnown RBP eCLIP23.1■■□□□ 1.291e-9■■■■■ 50.1
HDAC11-210ENST00000425430 METP08581 1390 aa23.1■■□□□ 1.29
HDAC11-210ENST00000425430 NALCNQ8IZF0 1738 aa23.1■■□□□ 1.29
HDAC11-210ENST00000425430 SETD5Q9C0A6 1442 aa23.09■■□□□ 1.29
HDAC11-210ENST00000425430 CLTCL1P53675 1640 aa23.09■■□□□ 1.29
HDAC11-210ENST00000425430 NEXMIFQ5QGS0 1516 aa23.08■■□□□ 1.28
HDAC11-210ENST00000425430 ADGRL3Q9HAR2 1447 aa23.08■■□□□ 1.28
HDAC11-210ENST00000425430 AFF2P51816 1311 aa23.08■■□□□ 1.28
HDAC11-210ENST00000425430 NAIPQ13075 1403 aa23.06■■□□□ 1.28
HDAC11-210ENST00000425430 CDK12Q9NYV4 1490 aaPredicted RBP23.05■■□□□ 1.28
HDAC11-210ENST00000425430 DDX17Q92841 729 aaKnown RBP23.04■■□□□ 1.28
HDAC11-210ENST00000425430 KIF1BO60333 1816 aa23.03■■□□□ 1.28
HDAC11-210ENST00000425430 LRRC59Q96AG4 307 aaKnown RBP23.03■■□□□ 1.28
HDAC11-210ENST00000425430 C8orf37Q96NL8 207 aa23.02■■□□□ 1.28
HDAC11-210ENST00000425430 PNPLA6Q8IY17 1366 aa23.01■■□□□ 1.27
HDAC11-210ENST00000425430 RGS12O14924 1447 aa22.99■■□□□ 1.27
HDAC11-210ENST00000425430 HFM1A2PYH4 1435 aa22.98■■□□□ 1.27
HDAC11-210ENST00000425430 C1orf167Q5SNV9 1468 aa22.97■■□□□ 1.27
HDAC11-210ENST00000425430 PTCH1Q13635 1447 aa22.96■■□□□ 1.27
HDAC11-210ENST00000425430 ADAMTS2O95450 1211 aa22.94■■□□□ 1.26
HDAC11-210ENST00000425430 QTRT2Q9H974 415 aaKnown RBP22.94■■□□□ 1.26
HDAC11-210ENST00000425430 RBM6P78332 1123 aaKnown RBP22.93■■□□□ 1.26
HDAC11-210ENST00000425430 LAMC1P11047 1609 aa22.93■■□□□ 1.26
HDAC11-210ENST00000425430 ROBO2Q9HCK4 1378 aa22.92■■□□□ 1.26
HDAC11-210ENST00000425430 NGLY1Q96IV0 654 aa22.91■■□□□ 1.26
HDAC11-210ENST00000425430 ORAI2Q96SN7 254 aa22.89■■□□□ 1.25
HDAC11-210ENST00000425430 VGFO15240 615 aaPredicted RBP22.88■■□□□ 1.25
HDAC11-210ENST00000425430 PPLO60437 1756 aa22.86■■□□□ 1.25
HDAC11-210ENST00000425430 SOS2Q07890 1332 aaPredicted RBP22.85■■□□□ 1.25
HDAC11-210ENST00000425430 PRAG1Q86YV5 1406 aa22.85■■□□□ 1.25
HDAC11-210ENST00000425430 USP21Q9UK80 565 aa22.83■■□□□ 1.25
HDAC11-210ENST00000425430 COL22A1Q8NFW1 1626 aaPredicted RBP22.82■■□□□ 1.24
HDAC11-210ENST00000425430 CDC42BPGQ6DT37 1551 aa22.82■■□□□ 1.24
HDAC11-210ENST00000425430 ATAD2Q6PL18 1390 aa22.81■■□□□ 1.24
HDAC11-210ENST00000425430 RPGRIP1LQ68CZ1 1315 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms