RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 DNAJB2P25686 324 aa8.46□□□□□ -1.06
SDCBPP2-201ENST00000424643 ITGBL1O95965 494 aaPredicted RBP8.45□□□□□ -1.06
SDCBPP2-201ENST00000424643 SLF2Q8IX21 1173 aa8.45□□□□□ -1.06
SDCBPP2-201ENST00000424643 OATP04181 439 aa8.44□□□□□ -1.06
SDCBPP2-201ENST00000424643 APLP1P51693 650 aa8.44□□□□□ -1.06
SDCBPP2-201ENST00000424643 PXYLP1Q8TE99 480 aa8.44□□□□□ -1.06
SDCBPP2-201ENST00000424643 TMEM134Q9H6X4 195 aa8.44□□□□□ -1.06
SDCBPP2-201ENST00000424643 SLC4A3P48751 1232 aa8.42□□□□□ -1.06
SDCBPP2-201ENST00000424643 KCNC4Q03721 635 aa8.42□□□□□ -1.06
SDCBPP2-201ENST00000424643 METTL3Q86U44 580 aaKnown RBP8.42□□□□□ -1.06
SDCBPP2-201ENST00000424643 NLRP7Q8WX94 980 aa8.42□□□□□ -1.06
SDCBPP2-201ENST00000424643 Q6ZNB5 142 aa8.41□□□□□ -1.06
SDCBPP2-201ENST00000424643 GTF3C3Q9Y5Q9 886 aa8.41□□□□□ -1.06
SDCBPP2-201ENST00000424643 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.4□□□□□ -1.06
SDCBPP2-201ENST00000424643 TMEM132AQ24JP5 1023 aa8.4□□□□□ -1.06
SDCBPP2-201ENST00000424643 TJAP1Q5JTD0 557 aa8.4□□□□□ -1.06
SDCBPP2-201ENST00000424643 ZC3H15Q8WU90 426 aaKnown RBP8.4□□□□□ -1.06
SDCBPP2-201ENST00000424643 MTRQ99707 1265 aa8.4□□□□□ -1.06
SDCBPP2-201ENST00000424643 PHOX2BQ99453 314 aa8.39□□□□□ -1.07
SDCBPP2-201ENST00000424643 SLC10A3P09131 477 aa8.38□□□□□ -1.07
SDCBPP2-201ENST00000424643 ZNF516Q92618 1163 aa8.38□□□□□ -1.07
SDCBPP2-201ENST00000424643 NECTIN2Q92692 538 aa8.38□□□□□ -1.07
SDCBPP2-201ENST00000424643 COPS2P61201 443 aa8.37□□□□□ -1.07
SDCBPP2-201ENST00000424643 TIMELESSQ9UNS1 1208 aa8.37□□□□□ -1.07
SDCBPP2-201ENST00000424643 IL21Q9HBE4 155 aa8.35□□□□□ -1.07
SDCBPP2-201ENST00000424643 IRF6O14896 467 aa8.34□□□□□ -1.07
SDCBPP2-201ENST00000424643 CFHP08603 1231 aa8.34□□□□□ -1.07
SDCBPP2-201ENST00000424643 MAP2K5Q13163 448 aa8.34□□□□□ -1.07
SDCBPP2-201ENST00000424643 SLC24A3Q9HC58 644 aa8.34□□□□□ -1.07
SDCBPP2-201ENST00000424643 DAXXQ9UER7 740 aaPredicted RBP8.34□□□□□ -1.07
SDCBPP2-201ENST00000424643 BRPF1P55201 1214 aaPredicted RBP8.33□□□□□ -1.08
SDCBPP2-201ENST00000424643 NKX2-3Q8TAU0 364 aa8.33□□□□□ -1.08
SDCBPP2-201ENST00000424643 PRR14Q9BWN1 585 aa8.33□□□□□ -1.08
SDCBPP2-201ENST00000424643 PCDHB3Q9Y5E6 796 aa8.33□□□□□ -1.08
SDCBPP2-201ENST00000424643 DDX11L8A8MPP1 907 aa8.32□□□□□ -1.08
SDCBPP2-201ENST00000424643 KMT5BQ4FZB7 885 aa8.32□□□□□ -1.08
SDCBPP2-201ENST00000424643 BLOC1S3Q6QNY0 202 aa8.32□□□□□ -1.08
SDCBPP2-201ENST00000424643 MINK1Q8N4C8 1332 aaPredicted RBP8.31□□□□□ -1.08
SDCBPP2-201ENST00000424643 ACTN4O43707 911 aaKnown RBP8.31□□□□□ -1.08
SDCBPP2-201ENST00000424643 LAPTM4AQ15012 233 aa8.31□□□□□ -1.08
SDCBPP2-201ENST00000424643 RDH13Q8NBN7 331 aa8.31□□□□□ -1.08
SDCBPP2-201ENST00000424643 NEUROD2Q15784 382 aa8.3□□□□□ -1.08
SDCBPP2-201ENST00000424643 RSPH4AQ5TD94 716 aa8.3□□□□□ -1.08
SDCBPP2-201ENST00000424643 CCDC102AQ96A19 550 aa8.3□□□□□ -1.08
SDCBPP2-201ENST00000424643 ZPR1O75312 459 aa8.29□□□□□ -1.08
SDCBPP2-201ENST00000424643 ZMYND10O75800 440 aa8.29□□□□□ -1.08
SDCBPP2-201ENST00000424643 MDM2Q00987 491 aaPredicted RBP8.28□□□□□ -1.08
SDCBPP2-201ENST00000424643 PUS10Q3MIT2 529 aaKnown RBP8.28□□□□□ -1.08
SDCBPP2-201ENST00000424643 PPP1R18Q6NYC8 613 aa8.28□□□□□ -1.08
SDCBPP2-201ENST00000424643 KRI1Q8N9T8 703 aaKnown RBP8.28□□□□□ -1.08
SDCBPP2-201ENST00000424643 LCE2BO14633 110 aa8.27□□□□□ -1.09
SDCBPP2-201ENST00000424643 TRAF7Q6Q0C0 670 aa8.27□□□□□ -1.09
SDCBPP2-201ENST00000424643 TLL1O43897 1013 aa8.26□□□□□ -1.09
SDCBPP2-201ENST00000424643 GFRA3O60609 400 aa8.26□□□□□ -1.09
SDCBPP2-201ENST00000424643 BARGINQ6ZT62 677 aa8.26□□□□□ -1.09
SDCBPP2-201ENST00000424643 SULF1Q8IWU6 871 aa8.26□□□□□ -1.09
SDCBPP2-201ENST00000424643 GCGRP47871 477 aa8.24□□□□□ -1.09
SDCBPP2-201ENST00000424643 FUT2Q10981 343 aa8.24□□□□□ -1.09
SDCBPP2-201ENST00000424643 ERICH6Q7L0X2 663 aa8.24□□□□□ -1.09
SDCBPP2-201ENST00000424643 SCUBE3Q8IX30 993 aa8.24□□□□□ -1.09
SDCBPP2-201ENST00000424643 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.24□□□□□ -1.09
SDCBPP2-201ENST00000424643 NR1I2O75469 434 aa8.23□□□□□ -1.09
SDCBPP2-201ENST00000424643 CD46P15529 392 aa8.21□□□□□ -1.1
SDCBPP2-201ENST00000424643 ATP6V1AP38606 617 aa8.2□□□□□ -1.1
SDCBPP2-201ENST00000424643 MORN1Q5T089 497 aa8.2□□□□□ -1.1
SDCBPP2-201ENST00000424643 REPIN1Q9BWE0 567 aaKnown RBP8.2□□□□□ -1.1
SDCBPP2-201ENST00000424643 PRKD2Q9BZL6 878 aa8.2□□□□□ -1.1
SDCBPP2-201ENST00000424643 GPCPD1Q9NPB8 672 aa8.2□□□□□ -1.1
SDCBPP2-201ENST00000424643 S1PR4O95977 384 aa8.19□□□□□ -1.1
SDCBPP2-201ENST00000424643 CLCN1P35523 988 aa8.19□□□□□ -1.1
SDCBPP2-201ENST00000424643 GGCXP38435 758 aa8.19□□□□□ -1.1
SDCBPP2-201ENST00000424643 C14orf37Q86TY3 774 aa8.19□□□□□ -1.1
SDCBPP2-201ENST00000424643 SLC27A5Q9Y2P5 690 aa8.19□□□□□ -1.1
SDCBPP2-201ENST00000424643 RNF223E7ERA6 249 aa8.18□□□□□ -1.1
SDCBPP2-201ENST00000424643 NRG2O14511 850 aaPredicted RBP8.18□□□□□ -1.1
SDCBPP2-201ENST00000424643 PPEF1O14829 653 aaPredicted RBP8.18□□□□□ -1.1
SDCBPP2-201ENST00000424643 ADH1BP00325 375 aa8.18□□□□□ -1.1
SDCBPP2-201ENST00000424643 AK7Q96M32 723 aa8.18□□□□□ -1.1
SDCBPP2-201ENST00000424643 TMUB1Q9BVT8 246 aa8.18□□□□□ -1.1
SDCBPP2-201ENST00000424643 SPSB2Q99619 263 aa8.17□□□□□ -1.1
SDCBPP2-201ENST00000424643 FAM217BQ9NTX9 383 aaPredicted RBP8.17□□□□□ -1.1
SDCBPP2-201ENST00000424643 KDM4AO75164 1064 aa8.16□□□□□ -1.1
SDCBPP2-201ENST00000424643 TTLL12Q14166 644 aaPredicted RBP8.16□□□□□ -1.1
SDCBPP2-201ENST00000424643 HLA-CQ95604 372 aa8.15□□□□□ -1.1
SDCBPP2-201ENST00000424643 THAP11Q96EK4 314 aa8.15□□□□□ -1.1
SDCBPP2-201ENST00000424643 SLC6A16Q9GZN6 736 aa8.15□□□□□ -1.1
SDCBPP2-201ENST00000424643 V9GY48 417 aaPredicted RBP8.15□□□□□ -1.1
SDCBPP2-201ENST00000424643 SSTR3P32745 418 aaPredicted RBP8.14□□□□□ -1.11
SDCBPP2-201ENST00000424643 GRIPAP1Q4V328 841 aa8.14□□□□□ -1.11
SDCBPP2-201ENST00000424643 GPBP1L1Q9HC44 474 aaPredicted RBP8.14□□□□□ -1.11
SDCBPP2-201ENST00000424643 TRIM66O15016 1216 aa8.13□□□□□ -1.11
SDCBPP2-201ENST00000424643 FMNL1O95466 1100 aaPredicted RBP8.13□□□□□ -1.11
SDCBPP2-201ENST00000424643 AMHR2Q16671 573 aa8.13□□□□□ -1.11
SDCBPP2-201ENST00000424643 RNF19BQ6ZMZ0 732 aa8.13□□□□□ -1.11
SDCBPP2-201ENST00000424643 BRICD5Q6PL45 260 aa8.12□□□□□ -1.11
SDCBPP2-201ENST00000424643 FAM160A2Q8N612 972 aaPredicted RBP8.12□□□□□ -1.11
SDCBPP2-201ENST00000424643 GUCA2AQ02747 115 aa8.11□□□□□ -1.11
SDCBPP2-201ENST00000424643 ZNF787Q6DD87 383 aa8.11□□□□□ -1.11
SDCBPP2-201ENST00000424643 GIGYF2Q6Y7W6 1299 aaKnown RBP8.11□□□□□ -1.11
SDCBPP2-201ENST00000424643 NUTM1Q86Y26 1132 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms